Callithrix jacchus (white-tufted-ear marmoset): 100392716
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Entry
100392716 CDS
T03264
Symbol
PSMA1
Name
(RefSeq) proteasome subunit alpha type-1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03050
Proteasome
cjc05010
Alzheimer disease
cjc05012
Parkinson disease
cjc05014
Amyotrophic lateral sclerosis
cjc05016
Huntington disease
cjc05017
Spinocerebellar ataxia
cjc05020
Prion disease
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100392716 (PSMA1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100392716 (PSMA1)
05012 Parkinson disease
100392716 (PSMA1)
05014 Amyotrophic lateral sclerosis
100392716 (PSMA1)
05016 Huntington disease
100392716 (PSMA1)
05017 Spinocerebellar ataxia
100392716 (PSMA1)
05020 Prion disease
100392716 (PSMA1)
05022 Pathways of neurodegeneration - multiple diseases
100392716 (PSMA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjc01002
]
100392716 (PSMA1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cjc03051
]
100392716 (PSMA1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjc04147
]
100392716 (PSMA1)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
100392716 (PSMA1)
Peptidases and inhibitors [BR:
cjc01002
]
Threonine peptidases
Family T1: proteasome family
100392716 (PSMA1)
Proteasome [BR:
cjc03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
100392716 (PSMA1)
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100392716 (PSMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
100392716
NCBI-ProteinID:
XP_002755033
Ensembl:
ENSCJAG00000009850
UniProt:
F7GW13
LinkDB
All DBs
Position
11:complement(77101996..77118516)
Genome browser
AA seq
263 aa
AA seq
DB search
MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ
KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM
ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERP
QRKAQPAQPADEPAEKADEPMEH
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaaatcaatatgacaatgatgtcactgtttggagccctcagggcaggattcat
caaattgaatatgcaatggaagctgttaaacaaggttcagccacagttggtctgaaatca
aaaactcatgcagtgttggttgcattgaaaagggcacaatcagagcttgcagctcatcag
aaaaaaattctccatgttgacaaccatattggtatctcaatcgcggggcttacagctgat
gctagactcttatgtaattttatgcgtcaggagtgtttggattccagatttgtatttgat
agaccacttcctgtgtcacgtcttgtatctctaattggaagcaagacccagataccaaca
caacgatatggccggagaccttatggtgttgggctgcttattgctggttatgatgatatg
ggccctcacattttccaaacctgtccatctgctaactattttgactgcagagctatgtcc
attggagcccgttcccaatcagctcgtacttacttggagagacatatgtctgaatttatg
gagtgcaatttaaatgaactagttaaacatggtctgcgtgccttaagggaaacacttcct
gcagaacaggacctaactacaaagaatgtttccattggaattgttggtaaagacttggag
tttacaatctatgatgatgatgatgtatctccattcctggaaggtcttgaagaaaggcca
cagagaaaggcacagcctgctcaacctgctgatgaacctgcagaaaaggctgatgaacca
atggaacattaa
DBGET
integrated database retrieval system
