Callithrix jacchus (white-tufted-ear marmoset): 100392744
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Entry
100392744 CDS
T03264
Symbol
LSM11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100392744 (LSM11)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
100392744 (LSM11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100392744
NCBI-ProteinID:
XP_035139399
Ensembl:
ENSCJAG00000018985
UniProt:
F7II80
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All DBs
Position
2:18612596..18629960
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AA seq
360 aa
AA seq
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MEERERGARSARAGSPVRPPSPRLDVSSDSFDPLLALYAPRLPPIPYPNAPCFNNVAEYE
SFLRTGVRGGGRGRGRARGAAAGSGVPAAPGPSGRTRRRPDAPAPDPERIQRLRRLMVTK
EEGDGAAGAGRRGPGRSRKAPRNVLTRMPLHEGSPLGELHRCIREGVKVNVHIRTFKGLR
GVCTGFLVAFDKFWNMALTDVDETYRKPVLGKAYERDSSLTLTRLFDRLKLQDSSKKEAD
SKSAVEDSTLSKYSQTSTWKLASVWGRGDTDRGSHKRSRSVPSSLQASAREESRSELSGR
TTRTEGSSVGGTFSRATTLSRSQSRKKKRKPKVDYQQVFTRHINQIFIRGENVLLVHLAQ
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgggagcggggggcgaggtcggctcgcgctgggagccccgtgcgcccgccc
agtccgcggctggatgtcagctctgacagcttcgacccgctgctggctctgtacgctccc
cgcctgcctcccataccctaccccaacgccccctgcttcaacaacgtggccgaatacgag
agcttcctcaggaccggggtccggggcggcgggcgcgggcgcgggcgggctcggggcgcg
gccgcgggctcgggggttcccgccgctcccgggccctcgggcaggactcgccgccgtccg
gacgcgcccgctccggaccccgagcgcatccagcgcctccgccgtctcatggtgaccaaa
gaggaaggggacggggccgccggagcgggccggaggggtccgggtaggagcaggaaggcg
ccgcgcaacgtgctcacgcgaatgcccttgcatgaaggcagccctctgggtgaactccat
cgctgtatccgggagggggtgaaggtgaatgttcacatccgcactttcaagggacttcgg
ggcgtctgtacaggcttccttgttgcatttgacaagttctggaatatggcacttactgat
gtcgacgagacctaccgaaaacctgtcctaggcaaagcgtatgaacgcgattcttcactg
actctcactaggctatttgatcggctgaaacttcaagattcctccaagaaggaagcagat
tctaagtctgcagttgaagattccactctgtccaaatactcacagacatccacttggaag
ttggcttcagtgtggggaagaggagacactgaccggggctcacacaagcgttcccgctct
gtcccttcttccctgcaggcctctgcaagggaggagtccaggtcagagctgtcagggagg
actacacggacagaaggctccagtgtgggaggtaccttttccagggctaccaccctttcc
agaagccagtcccgtaagaaaaagcgaaagcccaaagtggattaccagcaggtattcact
cgacacataaatcagattttcattcgaggcgagaatgtcctgctggttcatcttgcacag
tga
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