Callithrix jacchus (white-tufted-ear marmoset): 100393138
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Entry
100393138 CDS
T03264
Symbol
SORCS2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100393138 (SORCS2)
Membrane trafficking [BR:
cjc04131
]
Protein recycling
Others
Others
100393138 (SORCS2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
100393138
NCBI-ProteinID:
XP_035150033
LinkDB
All DBs
Position
3:183625452..184197170
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AA seq
1171 aa
AA seq
DB search
MAHRGPPRTPKGPGPAARAPSPGAPPPPRSRPLLLLLLLLGACGAAGRSPEPGRLGPRAQ
LTRVPRSPPAGRAEAGGGEDRRARGTEPRVPGPRPGPAPSPGEDGAPAAGNRRWERAAPL
AGAASRAQVSLISTSFVLKGDATHNQAMVHWTGENSSVILILTKYYHADMGKVLESSLWR
SSDFGTSYTKLTLQPGVTTIIDNFYICPTNKRKVILVSSSLSDGDQSLFLSTDEGATFQK
QPVPFFVETLIFHPKEEDKILAYTRESKLYVSSDLGKKWTLLQDRVTKDHVFWAVSGVDD
DPDLVHVEAQDLSGGFRYVTCSIYNCSEKTLTAPFAGPIDQGTLTVQDDYIFFKATSANR
TKYYVSYRRNEFVLMKLPKYALPKDLQIISTDESQVFVAVQEWYQVDTYNLYQSDPRGVH
YALALEDVRSSRQAEESVLIDILEVRGVKGVFLANQKIDGKVMTLITYNKGRDWDYLRPP
SMDMNGKPTNCKPPDCHLHLHLRWADNPYVSGTVHTKDTAPGLIMGAGNLGSQLVEYKEE
MYITSDCGHTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFSADEGLTWSTYNFTS
TSVFVDGLLSEPGDETLVMTVFGHISFRSDWELVKVDFRPSFSRQCSEEDYSSWDLSNLQ
GDHCIMGQQRSFRKRKSTSWCIKGRSFTSALTSHVCECRDSDFLCDYGFERSPSSESNTN
KCSANFWFNPLSPPDDCALGQTYTSSLGYRKVVSNMCEGGVDLQQGPVQLQCPLTPPRGL
QVSIQGEAVAVRPGEDVLFVVRQEHGDVLTTKYQVDLGDGFKAMYVNLTLTGEPIRHRYE
SPGVYRVSVRAENIAGHDEAVLFVQVNSPLQALYLEVVPVVGINQEVNLTAVLLPLNPNL
TVFYWWIGHSLQPLLSLDNSVTTRFSDTGDVRVTVQAACGNSVLQDSRVLRVLDQFQVVP
LEFSKELDAYNPNTPEWREDVGLVVTRLLSKETSVPEELLVTVVKPGLPTLADLFVLLPP
PRPTRKRSLSSDKRLAAVQQVLKAQKISFLLRGGVRVLVALRDTGTGVQQLGSGGGYWAV
VVLFVIGLFAAGAFILYKFKSRKRPGRTVYAQMHNEKEQEMTSPVSHSEDVQGAVQGEEF
IDDDLNSQTLGNHSGVVLSINSREMHSYLVS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccgggggcccccgcgtaccccgaagggccccggccccgccgcccgagcccct
agccccggggcccctccgccgccgcgctcgcggccgctgctgctgctgctgctgctgctg
ggcgcctgcggggcggcggggcgctcccccgagcccgggcgcctgggtccccgcgcgcag
ctgactcgggtgccacggagccctcccgcggggcgcgcggaggccggtggcggcgaggac
cggcgggcgcgcggcacggagccccgcgtcccgggtccgagaccaggtcccgctccgagt
cccggcgaggacggcgcccccgccgcgggcaaccggcgctgggagcgggcggcgccgctg
gccggagcggcttcgcgggcgcaggtctcgctcatcagcacgtcgttcgtgctcaagggg
gacgcgacgcacaaccaggcgatggtgcactggacgggcgagaacagcagcgtgatcttg
atcctgacgaagtactaccatgcagacatggggaaggttctggaaagctcactgtggcgg
tcgtcggatttcgggacgtcctacaccaagctcaccctccagcctggcgtcaccaccatc
atcgacaacttctacatctgcccgaccaataaacggaaggttatcctcgtcagctcctca
ctcagtgacggggaccagagcctattcctcagcacggacgaaggcgccacctttcagaag
cagcccgttcccttcttcgtggaaacactgatttttcatcccaaggaggaagacaagatc
ctcgcctacacaagggagagcaagctctacgtgtcatctgacttggggaaaaagtggact
cttctgcaagatcgagtgactaaagaccacgtgttctgggctgtgtctggggtggacgat
gaccctgacttggtccatgtggaagcccaggacctcagtggaggttttcggtacgtcacc
tgctcaatctacaattgctctgagaagactctgacggccccgtttgcaggccccattgac
cagggcactctgactgtgcaggacgattacatcttctttaaggcaacatcagcaaaccgg
acgaaatactatgtttcttaccgtcgcaacgaatttgtcctgatgaagctgccgaagtac
gcactgccaaaggatctgcagatcatcagcacggatgagagtcaggtgttcgtggcggtg
caggagtggtaccaggtggacacctacaacctgtaccagtcggatccgcggggtgtgcac
tacgcgctggcgctggaggatgtgcgcagctcgaggcaggcggaggagagcgtgctcatt
gacatcctggaggtcagaggggtgaaaggagtcttcctggcaaaccaaaaaattgatggg
aaagttatgacgcttataacctacaacaagggccgtgactgggattacctgaggccaccc
agcatggacatgaatggaaaaccaaccaactgcaagcctccagactgccacctgcacctg
cacctgcgctgggcagacaacccctatgtatcgggcactgtgcacaccaaggacacggcc
ccaggcctcatcatgggtgcaggtaacctgggctcacagctggtggaatataaagaagaa
atgtacatcacatcagactgcggacacacctggcggcaggtgtttgaggaggagcaccac
atcctgtacctggaccacggcggggtgatcgtggccatcaaagacacctccatccccttg
aagatcctcaagttcagtgcggatgagggcctcacctggagcacgtacaacttcaccagc
acctcagtgtttgtggacgggctgctgagtgagccaggggacgagacactggttatgacg
gtctttggccacatcagctttcgctccgactgggagctggtcaaggtggacttccggccc
tcgttctccaggcagtgcagcgaggaggactacagttcctgggacctgtccaacctgcag
ggtgaccactgcatcatgggccagcagagaagtttccggaagagaaagtctacgtcctgg
tgcatcaaggggaggagtttcacatcagcactcacatcccacgtgtgtgagtgccgggac
tcggacttcctgtgcgactacggatttgaacgctccccctcctcagagtccaacaccaac
aagtgctctgccaacttctggttcaaccccttgtccccgcctgacgactgtgccctgggc
cagacctacaccagcagccttgggtaccggaaagtggtgtccaacatgtgtgagggtggt
gtggacctgcagcagggtcccgtgcagctgcagtgccccctcaccccgccccgcggcctg
caggtcagcatccaaggcgaggcggtggccgtgcgacctggagaggacgtcctgtttgtg
gtgcggcaggagcacggcgatgtcctgaccaccaagtaccaggtggacctcggggacggc
ttcaaggccatgtacgtgaaccttacgctgaccggggaacccatccggcaccgctatgag
agtcccggtgtctaccgcgtgtctgtgagggcagagaacatcgctggccacgacgaggcg
gtgctctttgtccaggtcaactcccctctgcaggccctctacctggaggtggttcctgtc
gtcggcatcaaccaggaggtgaacctcacagctgtgctgcttcccttgaaccccaacctc
accgtcttctactggtggatcggccacagcctgcagcccctgctttccctggataattct
gtgacaacgcgattttcggacacgggcgacgtgcgtgtgaccgtgcaggccgcctgcggg
aactcggtgctgcaggactccagggtcctccgtgtgctggatcaatttcaggtcgtgcct
ctagagttttccaaggagctggatgcctacaaccccaatacgcccgagtggagggaagat
gtgggcctggtggtcacccggctgctctccaaggaaaccagcgtccctgaggagctcctg
gtgactgtggtgaagccggggctccccaccttggctgacctgttcgtgctccttccccct
cccaggcccacaaggaagaggagcctctcaagtgataagaggcttgctgccgtccagcag
gtgctgaaggctcagaagatcagcttcctcctgcgagggggggtccgggtcctggtggcg
ctgcgggacacaggcacaggtgtgcagcagctgggcagtggcggcggctactgggcggtg
gtggtgctgtttgtcatcgggctcttcgccgcgggagcgttcatcctctacaagttcaaa
agcaggaaacggcccggcaggaccgtgtatgcccaaatgcacaatgagaaggagcaggag
atgaccagccctgtgagccacagcgaggacgtccagggcgccgtccagggtgaggagttt
atagatgatgatctcaactcacagactctaggcaaccactccggcgtggtcctgagcatc
aactcccgagagatgcacagctacctggtgagctga
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