Callithrix jacchus (white-tufted-ear marmoset): 100393202
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Entry
100393202 CDS
T03264
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100393202 (DSCAML1)
Cell adhesion molecules [BR:
cjc04515
]
Immunoglobulin superfamily
DSCAM family
100393202 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
100393202
NCBI-ProteinID:
XP_002754510
Ensembl:
ENSCJAG00000012950
UniProt:
F7FZM3
LinkDB
All DBs
Position
11:complement(14852335..15226482)
Genome browser
AA seq
2113 aa
AA seq
DB search
MTGAGEPRREEPPPQPSAGLRSRESGARSAGGWERAERGRGAAARPATGPPPRRIGPLYG
MWLVTFLLLLDSLHKARPEDVGTSLYFVNDSLQQVTFSSSVGVVVPCPAAGSPSAALRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSTFNSFIHDNDYFCTAENAAGKIRSPNIRVK
AVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFLITYHG
GLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAS
HTVELPCTASGYPIPAIRWLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEVTNTF
GSAEATGTLTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPDEA
ISIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIALEDGTPRIVSSFSEKVVN
PGEQFSLMCAAKGAPPPTVTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNITGPQIRDG
GVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK
DALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQ
PFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVS
LKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPK
VMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKS
MFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIA
TKDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKA
RSMNLRWTQRFDGNSLITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSI
RMYSFNKIGRSEPSKELTVSTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIR
GYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSE
INATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWG
EMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAV
PSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQ
YLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNPVGDPAPA
VKWTKDSEDSAIPVSMDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLV
QVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDLFISSSERSF
KLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSRDQHLFTHINSTHARLNL
QGWNNGGCPITVIMLEYRPKGTWAWQALRANSSGEVFLTELREATWYELRMRACNSAGCG
NETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKR
LKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKA
TIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHST
RNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMST
PSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPC
PVVPPRETSIRNLGRTYHTQARHLTLDPASKPLGLPHPGAPAAASTATLPQRTLAMPAPP
AGTAPPAPGPTPAEPPTAPSAAPPAPSTEPPRGGGPHTKMGGSRDSLLEMSTSGVGRSQK
QGAGAYSKSYTLV
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagccggggagccgaggagggaggagccgccgccgcagccgagcgctgggctg
aggagcagagagagcggggcgcggagtgcgggcggctgggagcgcgctgagcgggggaga
ggcgctgccgcacggccggccacaggaccacctccccggagaatagggcctctttatggc
atgtggctggtaactttcctcctgctcctggactctttacacaaagcccgccctgaagat
gtcggcaccagcctctactttgtaaatgactccttgcagcaggtgaccttttccagctcc
gtgggggtggtggtgccctgcccggctgcaggctcccccagcgcggcccttcgatggtac
ctggccacgggggacgacatctacgacgtgccgcacatccggcacgtccacgccaacggg
acgctgcagctctaccccttctccccctccaccttcaatagctttatccacgacaatgac
tacttctgcaccgcggagaacgctgccggcaagatccggagccccaacatccgcgtcaaa
gcagttttcagggaaccctacaccgtccgggtggaggatcaaaggtcaatgcgtggcaac
gtggctgtcttcaagtgcctcatcccctcttcagtgcaggaatacgttagcgttgtgtct
tgggagaaagacacagtctccatcatcccagaaaacaggtttcttattacctaccatggc
gggctgtacatatctgacgtacagaaggaggacgccctctctacctatcgctgtatcacc
aagcacaagtacagcggggagacccggcagagcaatggggcacgcctctccgtgacagac
cctgctgagtcgatccctaccatcctagacggcttccactcccaggaagtgtgggccagc
cacactgtggagctgccctgcaccgcctcgggctaccctatccccgccatccgctggctt
aaggatggccggcccctcccagctgacagccgctggaccaagcgcatcacggggctgacc
atcagcgacttgcggaccgaggacagcggcacctacatttgtgaggtcaccaacaccttt
ggctcggcagaggccacaggcaccctcacagtcattgatccccttcatgtgaccctgaca
ccaaagaagctgaagaccggcattggtagcacggtcatcctctcctgtgccctcacgggc
tccccggagttcaccatccgctggtatcgaaacacggagctggtgctgcccgacgaggcc
atctccatccgcgggctcagcaacgagacgctgctcatcacctcggcccagaagagccat
tccggggcctaccagtgctttgccacccgcaaggcccagaccgcgcaggacttcgccatc
attgcactcgaggatggcacgccccgcatcgtctcgtccttcagcgagaaggtcgtcaac
cctggggagcagttctcactgatgtgtgcggccaagggtgccccgccccctacagtcacc
tgggccctggacgacgagcccatcgtgcgggatggcagccaccgaaccaaccagtacacc
atgtcagatggcaccaccatcagccacatgaacatcacaggcccccagatccgtgatggg
ggcgtgtaccggtgcacagcgcggaactcggtgggcagtgctgaatatcaggcgcgaata
aacgtaagaggcccccccagcatccgggccatgaggaacatcacagcagttgccgggcgg
gacacccttatcaactgcagggtcatcggctatccctactactccatcaagtggtacaag
gacgccctgctgctgccggacaaccaccgccaggtggtgtttgagaacgggaccctcaag
ctgaccgatgtgcagaagggcatggacgagggggagtacctgtgcagcgtcctcatccag
ccccagctctccatcagccagagcgtccacgtggccgtcaaagtaccccctctgatccag
ccctttgagttcccacctgcctccatcggccagctgctctacattccctgtgtggtgtcc
tcgggggacatgcccatccgaatcacctggaggaaggacggacaggtgatcatctcaggc
tcgggcgtgaccatcgagagcaaggaattcatgagctccctgcagatctccagtgtctcc
ctcaagcacaacggcaactacacgtgcatcgccagcaacgcggcggccaccgtgagccgg
gagcgccagctcatcgtgcgcgtgccccctcgatttgtggtacaacccaacaaccaggac
ggcatctacggcaaagctggtgtgctcaactgctcggtggacggctaccccccgcccaag
gtcatgtggaagcatgccaaggggagcgggaacccccagcagtaccaccctgtgcccctc
actggccgcatccagatcctgcccaacagctctctgctgatccgccacgtcctagaagag
gacatcggctactacctctgccaggccagcaacggcgtaggcactgacatcagcaagtcc
atgttcctcacagtcaagatcccggccatgatcacttcccaccccaacaccaccatcgcc
atcaagggccatgcgaaagaactgaactgcaccgcacggggtgagaggcccatcatcatc
cgctgggagaagggggacacggtcatcgaccctgaccgcgtcatgcggtacgccattgcc
accaaggacaatggtgacgaggtcatctccacgctgaagctcaagccagctgaccgtggg
gactctgtgttcttcagctgccatgccatcaactcgtatggggaggaccggggcttgatt
caacttactgtgcaagagcctccggaccccccagagctggagatccgggaggtgaaggcc
cggagcatgaacctgcgctggacccagcgattcgatgggaacagcctcatcacaggcttc
gacatcgaatacaagaacaaatcagattcctgggacttcaagcagtccacacgtaacatc
tcccccaccatcaaccaggccaacatcgtggacttgcacccagcatccgtgtacagcatc
cgcatgtactccttcaacaagattggccgcagtgagccaagcaaggagctcaccgtcagc
accgaggaggccgctcctgatgggccacccatggatgttaccttgcagccagtgacctca
cagagcatccaggtgacctggaaggcacccaagaaggagctgcagaatggtgtcatccgg
ggctaccagatcggctacagagagaacagccccggcagcaacgggcagtacagcatcgtg
gagatgaaggccacgggggacagtgaggtctacaccctggacaacctcaagaagttcgcc
cagtatggtgtggtggtccaggccttcaatcgggctggcacggggccctcatccagcgag
atcaatgccacaactctggaggatgtgcccagccagccccccgagaacgtccgggccctg
tccatcacttctgacgtggccgtcatctcttggtctgagcccccacgcagcaccctcaat
ggcgtcctcaaaggctatcgggtcatcttctggtcactctacgttgatggggagtggggc
gagatgcagaacatcaccaccacacgggagcgggtggagctgcggggcatggagaagttc
accaactacagcgtccaggtgctggcctacacccaggcgggggacggcgtgcgcagcagc
gtgctctacatccagaccaaggaggatgttccaggtccccctgctggcatcaaagctgtc
ccttcatcagctagcagtgtggttgtgtcttggctcccccctaccaagcccaacggggtg
atccgcaagtacaccatcttctgctccagccccgggtctggccagccggctcccagtgag
tacgagactagtccagagcagctcttctaccggatcgcccacctaaaccgcggtcagcag
tatctgctgtgggtggccgccgtcacctccgccggccggggcaacagcagcgagaaggtg
accatcgagcctgctggcaaggccccagcaaagatcatctcctttgggggcaccgtgaca
acaccttggatgaaagatgttcggctgccttgcaatccggtgggagatccagcccctgct
gtgaagtggaccaaggacagtgaagactcggccatcccagtgtccatggatggacaccgg
ctcatccacactaacggcacgctgctactgcgcgcagtgaaggctgaggactccggctac
tacacctgcacagccaccaacaccgggggcttcgacaccatcatcgtcaaccttctggtg
caagttcccccggaccagccccgcctcactgtctccaaaacctcagcttcatccatcacc
ctgacctggattccaggtgacaatgggggcagctccatccgaggcttcgtgctgcagtac
tcggtggacaacagcgaggagtggaaggacctgttcatcagctccagtgagcgctccttc
aagttggacagcctcaagtgtggcacgtggtacaaggtgaagctggcagccaagaacagc
gtgggctctgggcgcatcagcgagatcatcgaggccaagacccacgggcgggagccttcc
ttcagcagagaccaacacctcttcacccacatcaactccacgcatgctcggcttaacctg
cagggctggaacaacgggggctgccctatcacagtcatcatgctggagtaccggcccaag
gggacctgggcctggcaggccctccgcgccaacagctccggcgaggtgtttctgaccgaa
ctgcgagaggccacatggtacgagctacgcatgagggcttgcaacagcgccggctgcggc
aacgagacggcccagtttgccaccctggactacgatggcagcaccattccacccattaaa
tctgctcaaggtgaaggggatgatgtgaagaagctgttcaccattggctgccccgtcatc
ctggccacactgggagtggcactgctcttcatcgtacgcaagaagaggaaggagaagagg
ctgaagcgactccgagatgcaaagagtttggcagaaatgttgataagcaagaacaatcga
agctttgacacccctgtgaaagggccgccccagggcccacggctacacattgacatcccc
agggttcagctgctcattgaggacaaagagggcatcaagcagctgggagatgacaaggcc
accatccctgtgacagatgctgagttcagccaagctgtcaacccacagagcttctgtact
ggcgtctccttgcaccacccagccctcatccagagcacaggacccctcatcgacatgtct
gacatccggccaggaaccaatccagtgtccaggaagaatgtgaagtcggcacacagtacc
cggaaccggtactcaagccagtggaccctgaccaagtgccaggcctccacacccgcccgc
accctcacctctgactggcgcactgtgggctcccagcatggtgtcaccgtcactgagagt
gacagctacagtgccagcctgtcccaggacacagacaaaggaaggaacagcatggtgtcc
acggagagtgcctcttccacctatgaggagctggcccgggcctacgagcacgccaagctg
gaggagcagctgcagcacgccaagtttgagatcaccgagtgcttcatctctgacagttcc
tccgaccagatgaccacaggcaccaatgagaacgctgacagcatgacatccatgagcaca
ccctcagagcctggcatctgccgcttcaccgcctcaccacccaagccccaggatgctgac
cggggcaaaaatgtggctgtgcccatccctcaccgggccaacaagagtgactactgcaac
ctgccactgtatgccaagtcggaggccttctttcgaaaggcagatggacgtgagccctgc
cctgtggtcccaccgcgagagacctccatccggaacctgggccgaacctaccacacccag
gctcgccacctgaccctggaccctgccagcaagcccttgggcctcccgcacccaggggcc
cctgctgccgcctccacagccaccttacctcagaggactctggccatgccagccccccca
gccggcacagcccccccagcccccggccccacccctgctgagccccccactgcccccagc
gccgcccctccagctcccagcactgagcctccacgaggcgggggcccacacaccaaaatg
gggggctccagggactcacttctcgagatgagcacatcgggggtagggaggtctcagaag
cagggggccggggcctactccaaatcctacaccctggtgtag
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