Callithrix jacchus (white-tufted-ear marmoset): 100393231
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Entry
100393231 CDS
T03264
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100393231 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100393231 (PNPT1)
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100393231 (PNPT1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
100393231 (PNPT1)
Messenger RNA biogenesis [BR:
cjc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
100393231 (PNPT1)
Transfer RNA biogenesis [BR:
cjc03016
]
Prokaryotic type
tRNA degradation factors
100393231 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
RST
Motif
Other DBs
NCBI-GeneID:
100393231
NCBI-ProteinID:
XP_002757788
Ensembl:
ENSCJAG00000009740
UniProt:
F7GWJ1
LinkDB
All DBs
Position
14:56542129..56601731
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AA seq
784 aa
AA seq
DB search
MAACRRCCSCLRLRPLSDGPFRLPGRNRALNQLQVRALWGSAGSRAVAVDLGTRKLEISS
GKLARFADGSAVVQSGDTAVMVTVVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGTSDKEILTSRVIDRSIRPLFPAGYFYDTQVLCNLLAVDGINEPDVLAINGASVALSLS
DIPWNGPVGAVRIGMIDGECVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQD
FCHAIKFGVKYTQQIIQGIQQLVKEIGVTKRTPQKLFTPSPEIVKHAHKLTMEKLYAVFT
DYEHDKISRDEAVNKIRLDTEEQLKEKFPEADPFEIIESFNVVAKEVFRSIILNEYKRCD
GRDLTSLRNVSCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDQVITAINGIKD
KNFMLHYEFPPYATNEIGKVTGLNRRELGHGALAEKALYPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDSGVPISSAVAGVAIGLVTKTDPEKGEIDDYRLLTDILGIEDYN
GDMDFKMAGTNKGITALQADIKLPGIPIKIVMEAVQQASVAKKEILQIMNKTISKPRASR
KENGPIVETVQVPLSKRAKFVGPGGYNLKKLQAETGVTVSQVDEETFSVFAPTPSAMHEA
RDFITEICKDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDQRKIKHP
TALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVVRTLNDRSSIVMGEPLSQSSS
HSSQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgcagacgctgctgctcgtgcctccggctccggccgctgagtgatggcccc
ttccgtctgccagggcggaatcgggcactcaaccagttgcaagtgcgagcactgtggggc
agcgcagggtctcgagctgtggctgtggacttaggcaccaggaaactggaaatatcctct
ggaaagctggccagatttgcagatggctctgctgtagtacagtcaggtgatactgcagta
atggtcacagtggtcagtaaaacaaaaccttcaccttcccagtttatgcctttggtggtt
gactacagacaaaaggctgctgcagcaggtagaattcccactaactatctgagaagagag
attggtacttctgataaggaaattcttacaagtcgagtaatagatcgttcgattagaccc
ctcttcccagctggctacttctatgatacacaggttctgtgtaatctgttagcagtagat
ggtattaatgagcctgatgtcctagcaattaatggcgcttctgtagccctctcattatca
gatattccttggaatggacctgttggggcagtacgaataggaatgattgatggagaatgt
gttgttaacccaacaagaaaagaaatgtcttctagtactttaaatctggtggttgctgga
gcacctaaaagtcagattgtgatgttggaagcctctgcagagaacattttacagcaggac
ttttgccatgctatcaaatttggagtgaaatatacccaacaaataattcaaggcatccag
cagttggtaaaagaaattggtgttaccaagaggacacctcagaagttatttaccccttcg
ccagagattgtgaaacatgctcataaactcactatggagaaactttacgcagtttttaca
gattatgaacatgataagatttccagggatgaagctgttaacaaaataagattagataca
gaggaacaactaaaagaaaaatttccagaggccgatccatttgaaataatagaatccttc
aatgttgttgcaaaggaggtttttagaagtattattttgaatgaatacaaaaggtgcgat
ggtcgggatttgacttcacttaggaatgtaagttgtgaggtagatatgtttaaaaccctt
catggatcagcactatttcaaagaggacaaacacaggtgctttgtactgttacatttgat
tccttagaatcgagtattaagtcggatcaagttataacagctataaatgggataaaagat
aaaaatttcatgctgcattatgagtttcctccttatgcaactaatgaaattggcaaagtc
actggtttaaatagaagagaacttgggcatggtgctcttgctgagaaagctttgtatcct
gttattcccaaagattttcctttcaccataagagttacatctgaagtcctggagtcaaat
gggtcatcttctatggcatctgcatgtggtggaagtttagcattaatggattcaggggtt
ccaatttcatctgctgtcgcaggcgtagcaataggattggtcaccaaaaccgatcctgag
aagggtgaaatagatgattatcgtttgctgacagatattctgggaatcgaagattacaat
ggtgacatggacttcaaaatggctggcactaataaaggaataactgcgttacaggctgat
attaaattacctggaataccaataaaaattgtaatggaggctgttcaacaagcttcagtg
gcaaaaaaggagatattacagatcatgaacaaaactatttcaaaacctcgagcatctaga
aaagaaaatggacctattgtagaaactgttcaggttccattgtcaaaacgagcaaaattt
gttggaccaggtggatataacttaaaaaaacttcaggcagaaacaggtgtaactgttagt
caggtggatgaagaaacgttctctgtatttgcaccaacacctagtgctatgcatgaggca
agagacttcattactgaaatctgcaaggatgatcaggagcagcaattagaatttggagca
gtgtataccgccacaataactgaaatcagagatactggtgtcatggtaaaattatatcca
aatatgactgcggtactgcttcataacacacaacttgatcaacgaaagattaaacatcct
actgccctaggattagaagttggccaagaaattcaggtgaaatactttggacgtgaccca
gccgatggaagaatgaggctttctcgtaaagtgcttcagtctccagctacaactgttgtc
agaactttgaatgacagaagtagtattgtaatgggagaacctctttcacagtcatcctct
cattcttctcagtga
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