Callithrix jacchus (white-tufted-ear marmoset): 100393743
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Entry
100393743 CDS
T03264
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D isoform X1
KO
K14007
protein transport protein SEC24
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100393743 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100393743 (SEC24D)
Membrane trafficking [BR:
cjc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100393743 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Nore1-SARAH
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
100393743
NCBI-ProteinID:
XP_008991019
Ensembl:
ENSCJAG00000003283
UniProt:
U3CPH5
LinkDB
All DBs
Position
3:74803908..74909677
Genome browser
AA seq
1033 aa
AA seq
DB search
MSQQGYVATPPYSQPQPGIGLSPPHYGHYGDPSHTASPTGMMKPAGPLGPTATGAILPPG
PPPPGPHQFGQNGAHATGHPPQRFSGPPPVNNVASSYAPYQPSAQSSYPTPMSTSSVTQL
GSQLSAMQINSYGSGMAPPSQGPPGPQSATSFQTPPRPPQPSILQPGSQVLPPPPTKLNG
PGASPLPPPMYRPDGLAGPPPPNAQYQLPPLPGQTLGAGYPPQQEANSGPQMAGTQLSYP
GGFPGGPAQMAGPPQPQKKLDLDSIPSPIQVIENDRASRGGQVYATNTRGQIPPLVTTDC
IIQDQGNASPRFIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNETPLYLVNHGESG
PVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSL
GSYEYVATLDYCRKNKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTVLEKLPKEEQEE
MSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSVIHNL
LDQIPDMFADSNENETVFAPVIQAGMEALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDK
KLVNTDKEKILFQPQTNVYDSLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLY
KYSNFQMHLDSQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMA
AIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLYKS
CETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSM
KVLPVYMNCLLKNCVLLSRPEISTDERAFQRQLVMTMGVADSQLFFYPQLLPIHTLDVKS
TTLPAAVRCSESRLSEGGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDTTLL
PEVGNPYSQQLRMIMGIIQQKRPYSMKLTLVKQREQPEMVFRQFLVEDKGLYGGSSYVDF
LCCVHKEICQLLN
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaaggttacgtggctacaccgccatattctcagccccagcctggaataggc
ctttctccacctcattatgggcactatggggatccatcacacacagcatctccaacaggt
atgatgaagccagcaggacctttggggcccactgctactggagcgatattgcctccaggt
cctccacctcctggaccccatcagtttggccagaatggagctcatgccactggtcaccct
ccccaaagattttcaggccctccacctgtcaacaatgtggcatcctcatatgcaccatac
caaccctctgcacaatcatcttatccaactcctatgtccacttcatctgtcacccagctg
ggcagccagctcagtgctatgcaaatcaacagctatggttcaggcatggctcctccaagc
cagggaccccctggccctcagtcagccacatcattccagactcctccacgacctccacag
ccatccattttgcagcctggatctcaggttcttccaccaccacccaccaaactcaatggt
cctggtgcttcacctttgcctccgccaatgtacaggccagatgggctcgctgggcctcct
cctccaaatgcccagtaccagctcccgcctcttccaggccagaccctgggcgctggatat
cctccacagcaggaagccaactctggcccccagatggcaggcacacagctctcttaccca
ggaggcttccctggaggtcctgcacagatggctggtccaccacagccccagaagaagctg
gatcttgactctatccctagcccaattcaggtgatcgagaatgatagagccagcagagga
ggacaagtttatgccaccaacaccagaggccagatccctcccctggtcactacagattgt
ataatacaagaccaaggaaatgccagtcctcgatttatccgttgcacaacatactgtttt
ccatgcacatcagatatggcaaagcaagctcagattccattagctgctgtcatcaaaccc
tttgccaccattccttcaaatgagactcccctttacttggtaaatcacggcgagagtgga
ccagtcagatgcaataggtgcaaggcctacatgtgcccatttatgcagttcatcgaagga
ggaaggagatatcagtgtggattttgcaactgtgtgaatgatgttccaccattctatttc
caacatctggaccacattggaagaagactagaccactatgagaaaccagagttatctcta
ggatcttatgaatatgttgcaactttagattattgcagaaagaataagcctcccaaccca
ccagccttcatcttcatgattgatgtttcatatagtaacataaagaatggacttgtcaag
ctcatatgtgaagaactgaagaccgtgctggaaaaacttccaaaggaagagcaagaagag
atgtctgcaattcgagtgggttttatcacgtataacaaagttctccatttctttaatgtg
aagagtaatttggcccagcctcagatgatggtagtgacagatgttggagaagtctttgtt
cctttgttggatggtttccttgtcaactatcaagaatcccaatctgtgattcataatttg
ttggaccagattccagacatgtttgcagactctaatgaaaatgagactgtctttgctcct
gtcatccaggctggcatggaagcactaaaggcagcagactgtcctgggaagctgttcatc
ttccattcttccttgccaactgctgaagcaccaggaaagctcaaaaacagagatgataaa
aaactggttaatacagacaaagagaagatacttttccagccccaaacaaatgtctatgac
tcattggccaaggactgtgtggctcacggctgctctgtgaccctcttcctctttcccagt
cagtatgtggatgtggcctcactggggctggttcctcagctcactggaggaaccctttac
aaatacagcaatttccagatgcacttggatagccaacaatttttgaacgacctcagaaat
gatattgaaaagaaaataggctttgatgctattatgagggttcgtaccagcacaggtttc
agagccaccgatttctttggtggaatcttgatgaacaacaccactgatgtagaaatggct
gccatcgactgtgacaaggcagttactgtggagttcaagcacgatgacaaactcagcgaa
gacagtggagccttaatccagtgtgctgtgctttacacaacaatcagtggtcaaagaaga
cttcggattcacaatcttggcttaaactgcagttcccagctggccgatctttataagagc
tgtgaaacagatgcccttatcaacttctttgccaagtcagcttttaaagcagttctccac
cagcctttgaaggtcatccgggaaattctagttaatcagactgcccatatgttggcatgt
taccggaagaattgtgccagtccttctgcagcaagccagcttattctaccagattccatg
aaagtactgccagtgtacatgaactgtttgttgaaaaactgtgtgctgctcagcagacca
gagatctcaactgatgagcgggcattccagagacagctggtcatgaccatgggtgtggct
gactctcagcttttcttctatccacaacttctgcccatacacacattagatgtcaagagt
acaacattacctgctgctgttcgttgctctgagtcccgtctttcagaaggaggaatattc
ttactagctaatggtctacacatgttcctatggttgggagtaagcagcccaccagaactg
atccaaggaatatttaatgtgccatcttttgcacatatcaacacagatacgacattgctg
cctgaggtaggaaacccatactctcaacaactcagaatgataatgggtattatccaacaa
aagaggccatattcaatgaagctcacattagtaaagcagcgagaacagccagaaatggtt
ttccgacagttcctggtagaagacaaaggactttatggaggctcttcttatgtggatttc
ctttgctgtgttcacaaggagatctgtcagctgcttaattaa
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