Callithrix jacchus (white-tufted-ear marmoset): 100393760
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Entry
100393760 CDS
T03264
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin isoform X2
KO
K06548
sialoadhesin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100393760 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cjc04090
]
100393760 (SIGLEC1)
04091 Lectins [BR:
cjc04091
]
100393760 (SIGLEC1)
CD molecules [BR:
cjc04090
]
Proteins
100393760 (SIGLEC1)
Lectins [BR:
cjc04091
]
I-type lectins (Siglecs)
100393760 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
C2-set_2
Ig_4
Ig_5
C1-set
Izumo-Ig
Ig_CD22
BiPBP_C
Ig_7
GATase_4
Motif
Other DBs
NCBI-GeneID:
100393760
NCBI-ProteinID:
XP_008993939
Ensembl:
ENSCJAG00000021174
UniProt:
A0A8I3ZZ37
LinkDB
All DBs
Position
5:complement(9100942..9126992)
Genome browser
AA seq
1702 aa
AA seq
DB search
MDFLPELLLLASFFSAGQASWGVSSPQNVQGVKGSCLLIPCIFSFPADVEVHDGITTIWY
YDYSGRQWVVSHSADLTRVEAHFRGRAEFVGHPEHRVCSLLLKDLRPEDSGSYNFRFEIS
EGNRWSDMKGTLVTVTEEPRAPTITSPAELLEGTEVDFNCSTPYMCLQEKVSLQWQGQDP
ARSVTSSSYKSEPTGVSHLETLHMAVSWQDHGRVLHCQLSMASHSAQAKIHLQVKYAPKG
VKILLSPSGRNILPGELVTLTCQVNSSYPAVSSITWLKDGVLLRGKTGMLQLFQATWSDA
GVYTCQAWNGVGSSVSPPINLHIFMAEVQVSPAGAILENQTVTLGCSTPNQAPSDLRYSW
YKNHAPLEDAHSHTLQLHSATRADTGYYFCEVQNAQGSERSGAVSVVVNHPPLIPVLTAF
LETQAGLVGILHCSVVSEPLATLVLSHGGHILASTSGDGDHSPRFSSTSGPNSLHLEIRD
LEEADSGEYKCSATNSLGNATSTLDFHANAARLLISPAAEVVEGQAVTLSCRSGLRPTPD
ARFSWYLNGALLHEGPSSSLLLPAASSTDAGSYHCRAQDSHSTSGPSSPAILTVLYPPRQ
PIFTTRLDFDAAGAGAGRRGLLLCRVDSDPPARLQLLHKDHVVATSLPSGGGCSTCGGCS
PRMKVTKAPNLLRIEIHNPLLEEEGLYLCEASNALGNTSASATFNGQATVLVIAPSHTLQ
EGTEANLTCNVSREAAGSPANFSWFRNGVLWAQGPLETVTLLPVARTDAALYTCCILTEA
DTQLSTPVHLNVLYPPDPPKLSALLDVGQGHMAVFVCTVDSHPLALLALFHGEHLLTTSL
GPQLPSQGRLRAKAEANSLKLEVRELGLGDSGSYRCEATNVLGSANTSVFFQVRGAWVQV
SPSPELQEGQAVVLSCQVPTGVPEGTSYRWYRDGQPLQEPTSAMLRFAAITLTQAGAYHC
QAQGPGSAITSLAAPVSLHVSYAPRQVTLTTLMDTGPGRLGLILCRVNSDPPAQLRLLHG
DRLVASTLQGMGGPAGGSPRLQVAAAPNTLRLEIHEAMLEDEGVYTCEASNTLGQVSASA
DFNAQAVNVQVWPGAAVQEGQLVNLTCLVWTTRPAQLTYTWYQDGKQRLGARSILLPNVT
VRDAASYHCSVDPPGQAPRLSRPITLDVLYAPRNLRLTYLLESRGGQLALVLCTVDSRPP
AQLALSHAGHLLASSTAASIPNTLRLELREPQPSDEGFYSCSARSPLGQANTSLELRLEG
VQVILAPEATVPEGTPITVTCEDPAALPPTLYAWYHNGRWLQEGPDASISFPVATRAHAG
AYSCQAQDAQGTRSSRPAALQVLYAPQDIVLSSFRDSRTRSMAVIQCTVDSEPPAELALS
HDGKVLATSGRVHSLASGTGHVQVARNSLRLQVQDVPAGDDDTYVCTARNLLGSVSTTRR
LQVEGPSVVAEPGLDVPEGTALNLSCHLPGGPGPVGNSTFAWFWNDRRLHTEPVPTLTFT
HVARAQAGMYHCLAELPAGAATSAPVMLRVLYPPKTPTMTVFMEPEDGLQGILDCRVESE
PLASLTLHLGSRLVASSQPRGIPAEPHIHVLASPNALRVDIEALRPSDQGEYVCSASNAL
GSASTSTYFGARALHHLRQFQQLLWALGVLVVLLLLLLGLWAYHTWSSLILMQPHGRPHP
VTRPWADWWCRLPSGGEGCQCL
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctgccggagcttctcctcctggcctcgttcttctccgcaggccaggcctca
tggggcgtttccagcccccagaatgtgcagggcgtgaaggggtcttgcctgctcatcccc
tgcatcttcagcttccctgccgatgtggaggtgcatgacggcatcacgaccatctggtac
tatgactactcaggccggcagtgggtggtgagccactcggcagacctcacgcgggtggag
gcccacttccgcggccgcgccgagttcgtggggcaccccgagcacagggtgtgcagcctg
ctgctgaaggacctccggcccgaggactccggctcttacaacttccgcttcgaaatcagc
gagggcaaccgctggtcagatatgaaaggcaccttggtcacagtgacagaggaacccagg
gcacccaccatcacctccccggccgagcttcttgagggcacagaggtggacttcaactgc
tccaccccctacatgtgcctgcaggagaaggtcagcctgcagtggcaaggccaggaccct
gctcgctctgtcacctccagcagctataagtctgagcccaccggtgtcagccacctggag
accctccacatggctgtgtcctggcaggaccatggccgggtcctgcactgccagctctca
atggccagtcacagcgctcaggccaagattcacctccaagtgaagtatgcccccaagggt
gtgaagatcctcctcagcccctcagggaggaatatccttccaggtgagctggtcacactc
acctgccaggtgaacagcagctaccctgcagtcagctccattacctggctcaaggatggg
gtgctcctccggggcaagactggtatgctgcagctgttccaggcaacctggagcgacgct
ggtgtctacacctgccaagcttggaatggcgtgggttcctcggtctcaccccccatcaac
ctccacattttcatggctgaggtccaggtgagcccagcaggtgccatcctagagaaccag
acagtgacactaggctgcagtacacccaaccaggcacccagcgatctccgctacagctgg
tacaagaaccacgccccactggaggatgcccactcccataccctccagctgcactcggcc
accagggctgacactggctactacttctgcgaggtgcagaatgcccaaggcagcgagcgt
tcaggcgctgtcagcgtggtagtcaaccacccacctctcatcccggtcctaacagccttc
ctggagacccaggcggggcttgtgggcatccttcactgctccgtggtcagtgagcccctg
gccacactggtgctgtcacatgggggtcatattttggcctccacctctggggatggagat
cacagcccacgcttcagcagcacctctggtcccaactccctgcacctggagattcgagac
ctggaagaagctgacagtggggaatacaagtgctcagccaccaactcccttggaaatgca
acctccaccctggacttccatgccaacgccgcccgcctcctcatcagcccggcagcagag
gtggtggaaggacaggcagtgacactgagctgcagaagcggcctgcgccccacgcctgat
gcccgcttctcctggtacctgaatggagccctgcttcacgaaggccccagcagcagcctc
ctgctccccgcggcctccagcactgacgccggctcataccactgccgggcccaggacagc
cacagtaccagcggcccctcctcgccagccatcctcactgtgctctacccccctcgccaa
ccaatattcaccacacggctggacttcgatgccgctggggccggggctggacggcgaggc
ctccttttgtgccgtgtggacagtgaccccccagcccggctgcagctgctccacaaggac
cacgtggtggccacttctctgccatcagggggtggctgcagcacctgtgggggctgttcc
ccacgaatgaaggtcaccaaagcccccaacttgctgcgcatagagattcacaaccctttg
ctggaggaggagggcttgtatctctgtgaagccagcaatgccctgggcaacacctctgcc
tctgccaccttcaatggccaggccactgtcctggtcattgcaccatcacacacactgcag
gagggcacagaggccaacttgacttgcaatgtgagccgggaagccgccggcagccctgcc
aacttctcctggtttcgaaatggggtgctgtgggcccagggtcccctggagaccgtgacg
ctgctgcccgtggccaggactgatgctgccctttacacctgctgcatcctcaccgaggct
gacacccaactctccactcccgtgcacctgaatgtactctatcccccagaccctccgaag
ctgtcggccctcctagacgtgggccagggccacatggctgtgtttgtctgcactgtggac
agccaccccctggccctgctggcccttttccacggggagcacctcctgaccaccagcctg
ggtcctcagctcccatcccaaggccggctccgggctaaggctgaggccaactccctgaag
ttagaggtccgagaattgggccttggggactctggcagctaccgctgtgaggccacaaat
gttcttggatcagccaacacttcagtcttcttccaggtccgaggagcctgggtccaggtg
tcaccatcacctgagctccaagagggccaggctgtggtcctgagctgtcaggtacccaca
ggagtcccagagggaacctcatatcgctggtatcgggatggccagcccctccaggagccg
acctcagccatgctccgatttgcagccataactttgacacaagctggggcctatcattgc
caagcccagggcccaggctcagccatcacgagcctcgccgcacccgtcagcctccacgtg
tcttacgccccacgccaggtcacactcactaccctgatggacacaggccctgggcggctg
ggcctcatcctgtgccgtgtgaacagcgaccctccagcccagctgcggctgctccatggg
gaccgcctcgttgcctccaccctacaaggcatggggggacctgcaggtggttctcccagg
ctgcaggtggctgcagcccccaacacactgcgcctggagatccacgaggcaatgctggag
gatgagggtgtctacacctgtgaggcctccaacaccctaggccaggtctcggcctctgct
gactttaatgctcaggctgtgaatgtgcaggtgtggcctggggcagccgtgcaggagggg
cagctggtgaacctgacctgccttgtgtggaccactcgcccggcccagctcacctacacg
tggtaccaggatgggaagcagcgcctgggtgcccggtccatcctcctgcccaacgtcacg
gtcagggatgccgcctcctaccactgtagtgtagatccccctggtcaggcaccccgcctt
tccagaccaatcaccttggacgtcctctacgcgcctcgcaatctgcgcctgacctacctc
ctggagagccgtggtgggcagctggccctggtactgtgcactgtggatagccgcccacct
gcccagctggccctcagccacgccggccacctcctggcctcctcgacagcagcctctatc
cccaacaccctgcgcctggagctgcgggagccacagcccagtgacgagggtttctacagc
tgctctgcccgcagccctttgggccaggccaacacatccctggaactgcggctagagggt
gtgcaggtgatcctggctccagaggctactgtgcccgagggtacccccatcacagtgact
tgtgaagaccctgctgccctcccacccaccctctatgcgtggtaccacaatggtcgttgg
ctgcaggagggtccagatgcttcgatttcattcccggtggccacgcgggctcatgcaggc
gcctactcctgccaggcccaggatgcccagggcacccgcagctcccgtcctgctgccctg
caagtcctctatgcccctcaggacatcgtgctgtcttccttccgggactccaggaccaga
tccatggctgtgatacagtgcaccgtggacagtgagccacctgctgagctggccctatct
catgatggcaaggtgctggccacgagtggcagggtccacagcttggcatcggggacaggc
catgtccaggtggcccgaaactccctacggctacaggtgcaagatgtgcccgcaggtgat
gatgacacctatgtttgcacagctcgaaacttgctgggctcagtaagcaccaccaggcgg
ctgcaggtggaagggccaagcgtggtggcagagcctggcctggatgtgcctgagggcact
gccctgaacctcagctgccacctcccaggtggccctgggcctgtgggcaactccaccttt
gcatggttctggaatgaccggcggctgcacacggagcctgtgcccactctcaccttcacc
catgtggctcgtgctcaagctgggatgtaccactgcctggctgagctccctgctggggct
gccacctccgctccggtcatgcttcgagtgctttaccctcccaagacgcccaccatgaca
gtcttcatggagcctgaggatggcctccagggcatcctggattgccgagtggagagtgag
cccctcgccagcctgactctccaccttggcagtcgactggtggcctccagtcagccccgg
ggtattcctgcagagccacacatccatgtcctggcctcccccaatgccctgagggtagac
atcgaggctctgaggcccagcgaccaaggggaatatgtgtgttctgcttcaaatgccctg
ggctctgcctctacctccacctactttggggccagagccctgcaccacctgcgtcagttc
cagcagctgctctgggccctgggagtactggtggtcctcctgctcctgctgttgggcctg
tgggcctaccacacctggagctcattgatcctgatgcagccacatgggagacctcatcct
gtgacccgcccctgggctgactggtggtgtcgcctgccctctggaggagaaggttgccag
tgcctgtga
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integrated database retrieval system
