Callithrix jacchus (white-tufted-ear marmoset): 100393825
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Entry
100393825 CDS
T03264
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03410
Base excision repair
cjc05166
Human T-cell leukemia virus 1 infection
cjc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100393825 (POLB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100393825 (POLB)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100393825 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100393825 (POLB)
Enzymes [BR:
cjc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100393825 (POLB)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100393825 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
100393825 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH
Cdd1
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
100393825
NCBI-ProteinID:
XP_002757050
Ensembl:
ENSCJAG00000007917
UniProt:
F7IKW6
LinkDB
All DBs
Position
13:complement(40904214..40937958)
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNAGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPYKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAYALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccgcaggagactctcaacgcgggaatcaccgacatgctcacg
gaactcgcaaactttgagaagaacgtgagccaagctatccacaagtacaatgcttacaga
aaagcagcatctgttatagcaaaatacccatacaaaataaagagtggagctgaagctaag
aaattgcctggagtaggaacgaaaattgctgaaaaaattgatgagtttttagcaactgga
aaattacgtaaactggaaaagattcggcaagatgatacaagttcatccatcaatttcctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acactagaagatctcagaaaaaatgaagataaattgaaccatcatcagcgaattgggctg
aaatattttggggactttgaaaaaagaatacctcgtgaagagatgttacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgaatacattgctacagtctgtggcagt
ttcagaagaggtgcagagtccagtggtgacatggatgttctcctgacccatccaagcttc
acttcagaatcaaccaaacagccaaaattattacatcaggttgtggagcagttacaaaaa
gtacattttatcacagataccctgtcgaagggtgagacaaagttcatgggtgtttgccaa
cttcccagtaaaaatgatgaaaaagaatatccacacagaagaattgatatcaggttgata
cccaaagatcagtattactgtggtgttctctatttcactgggagtgatattttcaataag
aatatgagggcttatgccctagaaaagggcttcacaatcaatgagtacaccatccgtccc
ttgggagtcactggagttgctggagaaccactgccagtggatagtgagaaagacatcttt
gattacatccagtggaaataccgagaacccaaggaccggagtgaatga
DBGET
integrated database retrieval system
