Callithrix jacchus (white-tufted-ear marmoset): 100393883
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Entry
100393883 CDS
T03264
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100393883 (NUP85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100393883 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100393883 (NUP85)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100393883 (NUP85)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100393883 (NUP85)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100393883 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
Motif
Other DBs
NCBI-GeneID:
100393883
NCBI-ProteinID:
XP_002748772
Ensembl:
ENSCJAG00000014508
UniProt:
F7IG61
LinkDB
All DBs
Position
5:127214771..127263636
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AA seq
656 aa
AA seq
DB search
MEELDGEPTVTLIPGVNSKKHQMCFDWGPGEMLVCETSFNKKEKSEVVPSCPFIYIIRKD
VDVYSQVLRKLFNESHGIFVGLQRIEEELTGKSRKSQLVRVSKNYRSVIRACMEEMHQVA
IAAKDPASGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSL
SADVLGSENPSKHESFWNLVTILVLQGRLDEARQMLSKEADTSPTSAGMCRIMGELMRTM
PILSPGNTQTLTELELKWQHWHEECERYLQDCTFASNPHLESLCKIMLGDEAALLEQKEL
LSNWYHFLVTRLLYSNPTVKPIDLQYYAQSSLDLFLGGESSPEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMRECLLLEYASGLFAHPSLWQLG
VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRVYGEKRFADAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MQCLEDLTSGRPVHGGPDTQQCQDDDIETTKVEMLRLALARNLARAIVREGSLEGF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcttgatggcgagccaacagtcactttgattccaggtgtgaattccaagaag
caccaaatgtgttttgactggggtccaggggaaatgctggtgtgtgaaacttccttcaac
aaaaaagaaaaatcagaggtggtgccaagttgcccctttatctatatcatccggaaggat
gtagatgtttactctcaagtattgagaaaactcttcaatgaatctcatggaatctttgtg
ggcctccagagaattgaagaagaattgactggaaaatccagaaaatctcaattggttcga
gtgagtaaaaactaccgatcagtcataagagcgtgtatggaggaaatgcaccaggttgca
attgctgctaaagatccagccagtggccgccagtttagcagccaggtctccattttgtca
gcaatggagctcatctggaacctgtgtgagattctttttattgaagtggccccagctggc
cctctcctcctccacctccttgactgggtccggctccatgtgtgtgaggtggacagtttg
tcggcggatgttctgggcagtgagaatccaagcaaacacgagagcttctggaacttggtg
accatcttggtgctgcagggccggctggatgaggcccgacagatgctctccaaggaagct
gacaccagccccacctctgcaggcatgtgccgaatcatgggggaactgatgaggacaatg
cccattctcagtcctgggaacacccagacactgacagagctggagctgaagtggcagcac
tggcacgaggagtgtgagcggtacctccaggactgcacgtttgccagcaaccctcacctg
gagtctctttgcaagatcatgctgggagacgaagctgccttgttagagcagaaggagctt
ctgagtaactggtaccatttcctagtgactcggctcttgtactctaatcccacagtaaaa
cccattgatctgcagtactacgcccagtccagcctagacctgtttctgggaggtgagagc
agcccagaacccctggacaacatcttgatggcggcctttgagtttgacatccatcaagtg
ataaaagaatgcagcatcgccctgagcaactggtggtttgtggcccacctgacggacctg
ctggaccactgcaaactcctccagtcacacaacctctattttggttccaacatgagagag
tgcctcctgctggagtacgcctcgggactgttcgctcatcccagcctgtggcagctggga
gtggattactttgattactgccctgagctgggccgagtctccttggagttgcacattgag
cggatacctctgaacaccgagcagaaagccctcaaggtgctgcggatctgtgagcagcgg
cagatgactgaacaagttcgcagcatttgtaagatcttagccatgaaagccgtccgcaac
aatcgcctgggttctgccctctcttggagcatccgcgctaaggatgccgcctttgccacg
cttgtgtcagaccggttcctcagggattactgtgagcgaggctgcttttctgatttggat
ctcatcgacaacctggggccagccatgatgctcagtgaccgactgacattcctgggaaag
tatcgcgagttccaccgtgtgtatggggagaagcgttttgccgatgcagcttcactcctt
ctgtccttgatgacgtctcagattgcccctcggtctttctggatgactctgctgacagat
gccctgccccttttggaacagaaacaggtgattttttcagcagaacagacgtatgagctg
atgcagtgtctggaggacttgacttcaggaagaccagtgcatggaggacccgacacccag
cagtgccaggatgatgacatagagactaccaaggtggaaatgctgaggcttgctcttgca
cgaaatcttgctcgggcaattgtaagagaaggctcactggaaggcttctga
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