Callithrix jacchus (white-tufted-ear marmoset): 100393912
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Entry
100393912 CDS
T03264
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100393912 (PARPBP)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100393912 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
100393912 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
SepF
Motif
Other DBs
NCBI-GeneID:
100393912
NCBI-ProteinID:
XP_009002738
Ensembl:
ENSCJAG00000014265
UniProt:
F7INL7
LinkDB
All DBs
Position
9:101651967..101720384
Genome browser
AA seq
579 aa
AA seq
DB search
MAVLNQKSVLDMIKEFRKNWHALCNSERTTVCGADSMLLALQLSMAENNKQHNGEFTVSL
SDVLLTWKYLLHEKLNLPVENMDVIDHYEDIRKIYDDLLKNSNMLDLIDVYKKCRTLTSN
CENNNRISPTQLLDFLSGTQYAVGGETDLYIPISPTSKYTQDNEKVQWLARKIIFSYLNL
LVNSKNDLAVAHILNIPDRGLGREAFTDLKHAAREKQMSIFLVATSFIRTIELGGKGYAP
PPSDPLRTHVKGLSNFISFIDKLDEILGEIPNPSLAGSQILSVIKMQLIKGQNSRDPFYK
AIEEVAQDLDFRIKNIINSQEGVIAVSTTDISPARPKSHAINHGTAYCGRDTVKTLLVLL
DEEAASAPTKNKAELLYDEENTIHPNRISVLTLFRSPTRVNNSMKPLRERICKSMQEKKI
KMKQTLIRSQFACTYKDDNMISKDNWKNINVASKPLCVLQMENNLSEGINSSIGRSTIGM
SFGNVHLDRSKNEKVSGKSSSQTGNKSSKRKQVALDGENILCDNGNEPPQHKSVKMPKKS
NDSQNKLYGKLAKVAKSNKCTAKNKLIPGQTKLTQFFRL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcttaatcagaagtctgtcttggatatgattaaagagtttcgaaagaattgg
catgctctttgtaactctgagagaactactgtatgtggtgcagactccatgctgttggca
ttgcagctttccatggcggagaacaacaagcagcacaatggagaatttacagtctctctc
agtgatgttttattgacctggaaatacttactccatgagaaattgaacttaccagttgaa
aatatggatgtgattgaccattatgaggacattaggaagatttatgatgatttgttgaag
aatagtaatatgttagatctgattgatgtttataaaaaatgtaggactctgacttctaat
tgtgaaaataataacagaatatcccctactcaactactggattttctgtctggcacacag
tatgcagtaggtggtgaaaccgatctttatataccaatatcaccaacgagtaaatatacc
caggataatgaaaaggtgcaatggctagcaaggaaaattatcttttcgtatttaaacctg
ctagtgaattcaaagaatgacctggctgtggctcatattctcaatattcctgatagagga
ctaggaagagaagccttcactgatttgaaacatgctgctcgagagaaacaaatgtctatc
tttttggtggccacatcatttattagaacaatagagcttggagggaaaggatatgcacca
ccaccgtcagatcctttaaggacacatgtaaagggattgtctaactttattagtttcatt
gacaaattagatgagattcttggagaaataccaaacccaagccttgcagggagtcaaata
ttatcagtgataaagatgcagctgattaaaggccagaacagcagggatcctttttacaaa
gcaatagaggaagttgctcaggatttggatttcaggattaaaaatattatcaattctcaa
gaaggtgttatagctgttagcactactgacatcagtcctgctcggccaaaatctcatgcc
ataaaccatggcactgcatactgtggcagagatactgtgaaaaccttactagttcttttg
gatgaagaagcagctagtgctcctaccaaaaacaaagcagagcttttatatgatgaggaa
aacaccattcatcctaatagaatttctgttcttacactttttaggtctcccacacgagtg
aataattcaatgaaacccctaagagagcgcatctgtaagtcaatgcaagagaaaaaaatt
aagatgaagcaaaccttaattagatcccaatttgcttgtacttataaagatgacaacatg
attagcaaggataattggaagaatattaatgtagcatcaaagcctttgtgtgttcttcag
atggaaaataacctttctgagggcataaattcatccattggaagatcaacaattggaatg
agttttggaaatgttcatctggacagaagtaaaaatgaaaaagtgtcaggaaaatcaagt
agtcagacaggaaataaaagctcaaaaaggaaacaggtggctttggatggtgaaaatatt
ctctgtgataatggaaatgaaccacctcaacataaaagtgttaaaatgcctaagaaatca
aatgattcacagaataaattgtatggcaaactagctaaagtagcaaaaagcaataaatgt
actgccaagaacaagttgattcctggccagacaaagttaactcagttttttagactataa
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