Callithrix jacchus (white-tufted-ear marmoset): 100393955
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Entry
100393955 CDS
T03264
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X5
KO
K09103
early B-cell factor
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100393955 (EBF1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100393955 (EBF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
100393955
NCBI-ProteinID:
XP_002744152
Ensembl:
ENSCJAG00000019016
LinkDB
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Position
2:complement(19608168..20021228)
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AA seq
592 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGSAAMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccaacggagtggaagcagcatgaaggaagagccgctg
ggcagcggcatgaacgcggtgcggacgtggatgcagggcgccggggtgctggacgccaac
acggcggcgcagagcggggtggggctggcccgggctcactttgagaagcagccgccttcc
aatctgcggaaatccaacttcttccacttcgtcctggccctctacgacagacagggccag
cccgtggagatcgagaggacagcgtttgtggggttcgtggagaaggaaaaagaagccaac
agcgaaaagaccaataacggaattcactaccggcttcagcttctctacagcaatgggata
aggacggagcaggatttctacgtgcgcctcattgactccatgacaaaacaagccatagtg
tatgaaggccaagacaagaacccagaaatgtgccgagttttgctcacacatgagatcatg
tgcagccgctgttgtgacaagaaaagctgtggcaaccgaaatgagactccctcagatcca
gtgataattgacaggttcttcttgaaatttttcctcaaatgtaaccaaaattgcctaaag
aatgcgggaaacccacgtgacatgcggagattccaggtcgtggtgtctacgacagtcaac
gtggatggccatgtcctggcagtctctgacaacatgtttgtccataataattccaagcat
gggcggagggctcggaggcttgacccctcggaaggtacgccctcttatctggaacatgca
gctactccctgtatcaaagccatcagcccgagtgaaggatggacgacgggaggcgcgact
gtgatcatcataggggacaatttctttgatgggttacaggtcatattcggtaccatgctg
gtctggagtgagttgatcactcctcatgccatccgtgtgcagacccctcctcggcacatc
cctggtgttgtagaagtcacactgtcctacaaatcgaagcagttctgcaaaggaacacca
ggcagattcatttacacagcgctcaacgaacccaccatcgattatggtttccagaggtta
cagaaggtcattcctcggcaccctggtgaccctgagcgtttgccaaaggaagtgatactc
aaaagggctgcggatctggtagaagcgctgtatgggatgccacacaacaaccaggaaatc
attctgaagagagcagctgacattgcagaggccctgtacagtgttccccgtaatcacaac
caactcccggcccttgctaacacctcggtccatgcagggatgatgggcgtgaattcgttc
agtggacaactggccgtgaatgtctccgaggcatcgcaagccaccaatcagggtttcacc
cgcaactcaagcagcgtatcaccacacgggtacgtgccgagcaccaccccccagcagacc
aactataactccgtcaccacgagcatgaacggatacggctcggctgccatgtccaatctg
ggtggctcccccaccttcctcaatggctcagctgccaactcgccctatgccatagtgcca
tccagccccaccatggcctcctccacaagcctcccctccaactgcagcagctcctcgggc
atcttttccttctcaccagccaacatggtctcagccgtgaaacagaagagtgctttcgca
ccagtcgtcagaccccagacctccccccctcccacctgcaccagcaccaacgggaacagc
ctgcaagcgatatctggcatgattgttccccccatgtga
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