KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100394123
Entry
100394123         CDS       T03264                                 
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100394123 (DHX8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjc03041]
    100394123 (DHX8)
Enzymes [BR:cjc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100394123 (DHX8)
Spliceosome [BR:cjc03041]
 Complex C
  Other components
   Step II factors
    100394123 (DHX8)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 GIPC1_GH2 AAA_19 nSTAND3 Flavi_DEAD AAA_16 T2SSE TsaE PhoH Sigma54_activ_2 OB_RRP5_4th ABC_tran
Other DBs
NCBI-GeneID: 100394123
NCBI-ProteinID: XP_035155536
Ensembl: ENSCJAG00000010659
UniProt: U3DQ08
LinkDB
Position
5:66486353..66526118
AA seq 1216 aa
MAVAVAMAGSVIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDTEHRDRTKKKKRSRSR
DRDRDRERNRDRDHKRRHRSRSRSRSRARERNKAKSRCRSRSRSQSPPKDRKDRDKYGER
NLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREG
RVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSM
RNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETG
ILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAK
ERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFG
GNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAE
AGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDG
MLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVK
FSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQE
EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAET
SLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYT
ERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL
GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDK
QALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLG
IMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR
QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNR
YEEPNAWRISRAFRRR
NT seq 3651 nt   +upstreamnt  +downstreamnt
atggctgtggctgtagccatggcaggatccgtaatcgggtcggagccaggcccagcggaa
gaacttgccaaacttgaatacctgtctttggtgtcgaaggtttgcactgagctggacaat
cacttggggatcaacgacaaggacctagctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacttttaaggcttctctcgtcaaaaatggtgcagaatttacggattct
cttattagtaacttgctgcgtctcatacaaaccatgcgacctccagcaaagccttccact
agcaaagatccagttgttaaacctaaaacggaaaaagaaaagctgaaggaactcttccca
gtcctttgccaaccggacaacccttctgttcggaccatgttggatgaagatgatgtgaaa
gttgctgtggatgtcctgaaagaattggaagctttaatgcccagcgcagcaggccaggag
aaacaaagagacactgagcaccgggacaggacaaagaagaagaagcggagtcgaagccga
gatcgagaccgagatcgagaacgaaatcgagatagagaccacaagcggagacaccgatcc
cgctcgcgatcacgctctagggcccgggagaggaacaaagccaagtctagatgccggtcc
aggagcaggagtcagagtccccccaaagaccggaaggaccgggacaaatacggagagagg
aatctggatagatggcgggataagcatgtggaccgccctcctccagaagagcccaccatt
ggggacatttataatggcaaagttaccagcatcatgcagttcggttgctttgtgcagctg
gaaggactaaggaagcggtgggaaggcctggtgcacatttctgagctccgacgggaaggt
cgtgtggccaatgtagctgatgtggtgagcaaaggccagagggtcaaagtcaaagtgctg
tccttcaccgggaccaagaccagcctgagcatgaaggatgtggatcaagagactggagaa
gatctaaacccaaatagacgacgaaatcttgttggggagaccaatgaagagacctcaatg
cggaatcctgatagacccactcacctgtcccttgtcagtgcccctgaagtagaggatgac
tcactggaacgcaagcgcctcacccgaatctctgatccagagaagtgggagatcaaacag
atgatcgctgccaatgtcctttccaaggaagagtttccagacttcgatgaagagactggc
attctccctaaggtggatgatgaagaagatgaggaccttgagattgaattggttgaagaa
gagcctccattcctgagagggcacactaagcaaagcatggacatgagccccattaaaatc
gtcaagaacccagatggctccctctcccaagcagcaatgatgcaaagtgccttggccaaa
gaaaggcgggaactcaagcaggcccagcgggaagctgagatggattctattcccatgggg
ctcaacaaacactgggttgaccctctgcctgatgcggaaggcagacagattgctgccaac
atgaggggtattgggatgatgcccaatgatattcctgagtggaagaaacatgcttttggg
ggcaacaaagcctcttatgggaaaaagacccagatgtcaatcattgaacagcgggagagc
ctgcccatctacaaactgaaggagcagttggtccaggccgtccatgacaatcagatcctg
attgttattggtgagacaggatctggaaagacaacacagatcacccagtacctggcggag
gcaggctacacttccaggggcaagattgggtgtacccagcccagaagagtggcagcaatg
tcagtggccaaaagggtgtcggaggagtttggttgttgcttaggccaagaggtgggctac
accattcgatttgaggactgcactagccctgaaacagtcatcaagtacatgacagatgga
atgttgcttagggagtgcttgattgaccctgacctcactcagtatgcaatcatcatgttg
gacgaggcacatgagaggacaattcacactgatgtgctctttggattgttgaaaaagaca
gttcagaaacggcaggacatgaagctgattgtcacctcagccaccttggatgcagtgaag
ttttctcaatacttctatgaagctcccattttcaccatcccaggtcgaacatatccagtg
gaaatactgtacacaaaggaacctgagacagattatctggatgccagcctgataactgtt
atgcagatccatttaacagagccaccaggtgatatcctggtcttcctgactggtcaggaa
gagattgatactgcttgcgagatcctgtatgaaagaatgaaatccctgggacctgatgtt
ccggagttaattatcctcccagtgtactctgctcttcccagtgagatgcagacccgaatc
tttgacccagctccaccaggcagcagaaaggttgtgattgccaccaatatcgcagagacg
tcgctgactattgatggcatctactacgtggtggacccaggattcgtgaagcagaaagtt
tacaattccaagacggggattgaccagcttgtggtgacgcctatttctcaggctcaggca
aagcaacgagctggcagagctgggagaacaggcccagggaagtgttacagactatataca
gaacgtgcctaccgagatgaaatgctcaccaccaacgtgccggaaattcagagaaccaac
ttagcaagcacggtgctgtcactcaaggccatgggtatcaatgacctgctgtcctttgat
ttcatggatgccccaccaatggaaactttgatcactgccatggagcagctgtatacactg
ggggccctggacgatgagggcctgctcactcgcttgggccgccggatggcagagtttcct
ctggagccaatgctatgcaaaatgctcatcatgtctgtgcatctgggctgcagtgaggaa
atgctgaccattgtatccatgctgtctgtgcagaacgtcttctataggcccaaggataaa
caagcccttgcagatcagaagaaggccaaattccaccagaccgaaggggaccacctcacc
ctgctagctgtgtacaactcctggaagaataacaagttctccaacccatggtgctatgag
aactttatccaggctcgttccctgcgccgggcccaggacattcgcaagcagatgttaggc
ataatggacagacataagctggatgttgtttcctgtggcaagtccacagtccgagtacag
aaggccatctgcagtgggttcttccgtaatgccgccaagaaagacccgcaggagggttac
cggaccctgatcgaccagcaggtggtctacatccatccttccagtgccctcttcaacaga
cagccagaatgggtcgtataccatgagctggtgctgaccaccaaggaatacatgcgtgag
gttaccaccatcgacccgcggtggcttgtggagtttgccccggctttctttaaggtctcc
gacccaactaagctaagcaaacagaagaagcagcagcgtctggaacccctgtacaaccgc
tatgaggaacccaatgcctggagaatatcccgggccttccgacggcgctga

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