Callithrix jacchus (white-tufted-ear marmoset): 100394364
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Entry
100394364 CDS
T03264
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X4
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00260
Glycine, serine and threonine metabolism
cjc00630
Glyoxylate and dicarboxylate metabolism
cjc00670
One carbon pool by folate
cjc01100
Metabolic pathways
cjc01200
Carbon metabolism
cjc01230
Biosynthesis of amino acids
cjc01240
Biosynthesis of cofactors
cjc01523
Antifolate resistance
cjc04981
Folate transport and metabolism
Module
cjc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
100394364 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
100394364 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
100394364 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
100394364 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
100394364 (SHMT1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
100394364 (SHMT1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
100394364
NCBI-ProteinID:
XP_017827723
Ensembl:
ENSCJAG00000001063
UniProt:
U3B9A5
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Position
5:complement(78762621..78804845)
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AA seq
483 aa
AA seq
DB search
MVMPVNGAHRDADLWSSHDKMLVQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRA
VLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGY
INYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADENGAYLMADMAHISGLVVAGV
VPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVQSVDPKTGKEILYNLESLINSAVFPGL
QGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVSGGSDNHLIL
VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFGK
VAHFIHRGIELTLQIQSDIGVRATLKEFKERLAGDKYKGAVQALREEVESFASLFPLPGV
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NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgccagtcaatggggcccacagggatgctgacctgtggtcctcacatgacaag
atgctggtgcagcccctcaaagacagtgatgttgaggtttacaacatcattaagaaggag
agtaaccggcagagggttggattggagctgattgcctcagagaattttgccagccgagca
gttttggaggccctaggctcttgcttaaataacaaatactctgaggggtacccaggccag
agatactatggcgggactgagtttattgatgagctggagaccctctgtcagaagcgagcc
ctccaggcctataagctggacccacagtgctggggggtcaacgtccagccctactcaggc
tcccctgcaaacttcgctgtatacactgccctggtggaaccccatggacgcatcatgggc
ctggacctgccggatggcggccacctgacccacgggttcatgacagacaagaagaaaatc
tccgccacatccatcttctttgaatctatgccctataaggtgaacccagacactggctac
atcaactatgaccagctggaggagaacgcccgcctcttccacccgaagctgatcatcgca
ggaaccagctgctactcccgaaacctggactatgcccgcctgcgcaagattgcagatgag
aatggggcatatctcatggcggacatggcacacatcagcgggctggtggtggctggcgtg
gtgccctccccatttgaacactgccacgtggtgaccaccaccactcacaagaccctgcga
ggctgccgagctggcatgatcttctacaggaaaggagtgcaaagtgtggatcccaagact
ggcaaagagattctgtacaacctagagtctctcatcaactctgctgtattccctggcctg
cagggaggtccccacaaccatgccattgctggggttgctgtggccctgaagcaagctatg
actctggaatttaaagtttatcagcaccaggtggtggccaactgcagggctctgtctgag
gcactgacagagctaggctacaaaatagtctcaggtggttccgacaaccatttgatcctc
gtggatctccgttccaaaggcacagatggtggaagggctgagaaggtactggaagcctgt
tctattgcctgcaacaagaacacctgcccaggtgacagaagcgctctacggcccagtgga
ctgcggctggggacaccggcactgacgtcccgtggacttttggaaaaagactttggaaaa
gtagcccactttattcacagagggatagagctaaccctgcagatccagagcgacattggt
gtcagagccaccctgaaggagttcaaggagagactggcaggggataaatacaagggggcc
gtgcaggctctccgggaggaggtcgagagcttcgcttctctcttccctctgcctggcgtg
cccgacttctaa
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