Callithrix jacchus (white-tufted-ear marmoset): 100394414
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Entry
100394414 CDS
T03264
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100394414 (PRPF39)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100394414 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
100394414
NCBI-ProteinID:
XP_002753900
Ensembl:
ENSCJAG00000015991
UniProt:
F7IP73
LinkDB
All DBs
Position
10:75509848..75541947
Genome browser
AA seq
669 aa
AA seq
DB search
MQNSHMDEYRNSSNGSTGSSSEVVVEHPADFSTEIMNVTEMEQSPDDSPNVNASTEESEM
ASAVDLPVTLTETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDK
FFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPG
DPETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKEHVQNNLPRDLLTGEQFIQFRRELASVNGHSGDDGPPGDDLPSGIEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNLEEAEHLLQD
AIKNAKSNNESSFYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILSCFDKAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QDSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAVYNYSAWYQYNYQNPWNY
GQYYPPPPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgaatacagaaattctagtaatggcagcacgggcagcagt
tcagaggtagtggtagaacatcctgctgatttcagtactgagattatgaatgttacagaa
atggaacagtcacccgatgactctcccaatgtgaatgcatctacagaagaaagtgaaatg
gcaagtgctgtggaccttccagtgacactgacagaaacagaagcaaatttccctccagaa
tatgaaaaattttggaaaaccgtagaaaataatcctcaggattttacaggctgggtatat
ttgcttcaatatgtagaacaggagaatcacttgatggctgccaggaaggcatttgacaaa
tttttcatacactatccatattgctatggttactggaaaaagtatgcagaccttgaaaag
cggcatgacaacattaaacaatcagatgaggtttatcggcgggggcttcaggcaatacct
cttagtgttgacctctggatacattatataaacttcttaaaagaaacattggaccctggt
gatcctgagacaaacaatacaataagaggaacttttgagcatgctgttctagctgcagga
acagatttccgttctgacagactgtgggaaatgtacataaactgggaaaatgagcaggga
aacctgagagaagttacagctatatatgatcgtattcttggtattccaacacagttgtat
agtcatcattttcagagatttaaagaacatgtacagaataacttgcctagagatctttta
actggtgaacagtttattcagtttcgaagggaattagcttctgtaaatggacatagtggt
gatgatggtcctcctggtgatgatctaccatcaggaattgaagacataactgatcctgca
aagctaattacagaaatagaaaacatgagacatagaatcattgagattcatcaagaaatg
tttaattataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaaga
ccttactttcatgtgaaacctttggaaaaggcacaactgaaaaactggaaagaatactta
gaatttgaaattgaaaatgggacacatgaacgagttgtggttctcttcgaaagatgtgtc
atatcatgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccat
agcattgaaggagtgaggcatgtcttcagcagagcttgtactatacatctcccaaagaaa
cccatggtgcatatgctttgggcagcttttgaggaacagcagggtaatattaatgaagcc
aggaatatcttaagaacatttgaagaatgtgttctaggattggcaatggttcgtttacga
agagtaagtttagaacgacggcatggaaatctggaagaagctgaacatttgcttcaggat
gccattaagaatgccaaatcaaataatgaatcttcattttatgctgtcaaactagcccgg
catctattcaaaatacagaaaaaccttccaaaatcaagaaaggtacttttggaagcaatt
gaaagagacaaagagaacacaaaattatacctcaatttacttgaaatggaatacagtggt
gacctcaaacaaaatgaagaaaatatcctaagttgttttgacaaagctgtacatggttca
ttacctattaaaatgagaatcacattttctcagagaaaagtggaatttcttgaagatttt
ggttccgatgtcaataagcttctgaatgcttatgatgaacatcagacactcttaaaagaa
caggattctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagca
catacagaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaat
caagctgtatataattatagtgcctggtatcaatacaattatcagaatccttggaattat
ggacagtattatcctccccctccaacctga
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