Callithrix jacchus (white-tufted-ear marmoset): 100394560
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Entry
100394560 CDS
T03264
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100394560 (GEMIN5)
03041 Spliceosome [BR:
cjc03041
]
100394560 (GEMIN5)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100394560 (GEMIN5)
mRNA cycle factors
P-body specific factors
100394560 (GEMIN5)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100394560 (GEMIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SCAP
PROPPIN
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
100394560
NCBI-ProteinID:
XP_035145242
Ensembl:
ENSCJAG00000007336
UniProt:
F6VDQ0
LinkDB
All DBs
Position
2:complement(52155276..52216272)
Genome browser
AA seq
1507 aa
AA seq
DB search
MGQEPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPDAGESPGTPPFRVIGEL
VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPR
VKDLIVSGDEKGVVFCYWLNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSINQEETSEDPEITNGNALAQVPVTIGC
YLATGSKDQTVRIWSCSRGRGVMILKLPFLKRRGGGIDPTVKERLWLTLHWPSNQPSQLV
SSCFGGELLQWDLTQSWRRKYTLFSASSEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDMATLDCCWTLPSLGGFAYSLAFSPVDIGSLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPTKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PVPPMSLGGEGDRPSLALYSCGGEGIVLQHNPWKLSGEAFDINKLIRDSNSIKYKLPVHT
EISWKADGKIMALGNEDGTIEIFQVPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLM
ASGSNNAVIYVHNLKTVIESSPESPVTITEPYRTLSGHTAKITSVAWSPHHDGRLVSASY
DGTAQVWDTLREEPLCNFRGHRGRLLCVAWSPLNPDCIYSGADDFCVYKWLTSMQDHSRP
PQGKKSIELEKKRLSQPKPKPKKKKKPTLRTPVKLESIDGNEEESMKENSGPVENGVSDQ
EGEEEAREPELPCGLAPAVSREPVICTPISSSFEKSKVTINNKVIFLKKEPPKEKPETLV
KKRKARSTLPLSTSLDHRSKEELHQDCLVLAMAKHSKELNEDVSADLEERFHLGLFTDRA
TLYKMIDIEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDNLVAMAPAAGYHV
WLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVALLKSNHFYREAIAVAKARLRPEDP
VLKDLYLSWGTVLERDGHYAIAAKCYLGATSAYDAAKVLAKKGDAASLRTAAELAGIVGE
DELSASLALRCAQELLLANNWVGAQEALQLHASLQGQRLVFCLLELLFRHLEEKQLSEGK
SSSSYHTWTIGTEGPFMERVTAVWKSIFSLDTPEQYQEAFQKLQNIKYPSATNNTPSKQL
LLHICHDLTLAVLSQQMASWDEAVQAFLRAVVRSYDSGSFTIMQEVYSAFLPDGCDHLKD
KLVDHQSPAIPAFKSLEAFFLYGRLYEFWWSLSRPCPNSSVWVRPGHSTFSVEPSQQLDT
ISTEETDPETSQPEPSRPSELDLRLTKEGERILSTFKALLSEKHASLQNSQRTVAEVQET
LAEMIRQHQKSQLCKSTANGPDKSEPDLEAEPLSSSQSQCKEEKNEPLSLPELTKRLTEA
NQRMAKFPESVKAWPFPDVLECCLIFLLIRFHFPDCLTQEMQQQAQELLQKYGNTKTYQR
HCQTFCT
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggggcaggagccgcggacgctgccgccctctcccaactggtactgcgcccgctgcagc
gatgccgtgcccgggggcctctttggcttcgccgcgcggacctccgtcttccttgtccgc
gtgggcccggacgcaggcgagagtcctgggacacctccgtttcgagtcataggagagttg
gtgggacacaccgagagggtctctggcttcacattttctcatcaccctggtcagtacaac
ctgtgtgccaccagctccgacgatgggactgttaaaatatgggacgtagagacaaaaaca
gttgtgacagaacatgcactccatcagcatacgatatcaacattacattggtctcctcga
gtaaaggacttaatagtatctggggatgaaaaaggggtagttttctgttactggcttaac
agaaatgacagccagcacctctttatagaacccaggacaattttctgtcttacttgttca
cctcatcatgaagatttagtagccattgggtacaaagatggcatagtggttataattgac
atcagtaagaaaggagaagttattcataggcttcgaggccatgatgatgaaatccactcc
atagcctggtgtcccctgcctggtgaagattgtttatctataaaccaagaggaaacatca
gaagaccctgaaattaccaacgggaatgctttggcacaagttccagtaacaattggctgc
tacttagccactggaagcaaagatcaaactgttagaatctggagctgttcgagaggccga
ggggtgatgattttgaaattgccctttctgaagagaagaggagggggtatagacccaact
gttaaagagcgcctttggctgacactccattggcccagcaatcagccgtcacagctggta
tctagctgttttggaggtgaactgttgcaatgggatctcactcagtcttggagacggaaa
tacaccctctttagtgcttcatcagaagggcaaaatcattcaagaattgtgtttaattta
tgtcctctacaaacagaggatgacaaacagctgctactttctacatcaatggatagagat
gtaaaatgttgggacatggccaccctggattgctgctggaccctgccttcccttggtggg
tttgcatacagcctggctttctctcctgtggacataggctctttggccataggtgttggg
gatggcatgatccgtgtatggaatacactctccataaagaacaactatgatgtgaaaaat
ttttggcaaggtgtcaagtccaaggttacagcgctctgctggcacccaaccaaggaaggt
tgcttagcttttggaactgacgatggaaaagtaggattgtatgacacttactccaacaag
cctccacagatttctagcacatatcataagaagactgtttatactttagcgtgggggcca
ccagtacccccgatgtcacttggaggagaaggagacagaccttcccttgctttatacagc
tgtggaggagaagggattgtcttacagcataacccttggaagcttagtggagaggccttt
gacatcaacaaactcatcagagacagcaattcaatcaaatataaattgcctgtacacaca
gagatcagttggaaagcagatggcaaaatcatggctcttggcaatgaagatggaacaata
gaaatatttcaggttcccaacttgaaactgatctgtactatccaacagcatcacaagctt
gtgaataccattagctggcatcatgagcatggcagccagccagagctgagctatctgatg
gcctctggctccaacaatgcagtcatttatgtgcacaacctgaagactgtcatagagagc
agccctgagtctccagtgaccattacagagccctatcggactctctcggggcatacagcc
aagatcaccagtgtggcatggagcccacatcatgatggaaggctggtatctgcttcctat
gatggtacagcccaggtgtgggatactctccgggaagaacccctgtgtaatttccgagga
catcgaggtcgactgctttgtgtggcgtggtctcctttgaacccagactgcatctattca
ggggcagatgacttttgtgtgtacaagtggctcacttccatgcaagatcattcccggcct
cctcaaggcaaaaaaagtattgaattagagaaaaaacgactctctcaacctaagccaaag
ccgaaaaagaagaaaaagcccaccttgagaactcctgtaaagctggaatcgatagatggg
aatgaagaagaaagcatgaaggagaactcaggacctgttgagaatggtgtgtcagaccaa
gaaggggaggaggaagcacgggagccagaattaccctgtggcctggctccagcggtttct
agggaaccagttatctgcactccaatttcctcaagctttgaaaagtcaaaagtcaccatt
aataacaaagtcattttcctgaaaaaggagccacctaaagagaagccagaaaccttagtc
aagaagagaaaagctcgttccacgcttcccctgagtacaagcctggaccacagatccaaa
gaggagcttcatcaggactgtttggtattagcaatggcaaagcactccaaagagctgaat
gaagatgtatctgctgatcttgaggaaagatttcatctggggcttttcacagacagggct
accctgtacaaaatgattgatattgaaggaaaaggtcacttagaaaatggccaccctgag
ttatttcaccagcttatgctttggaaaggagatctcaaaggtgttctccagactgcagca
gaaagaggggagctgacagacaaccttgtggctatggcaccagcggctggctaccacgtg
tggctctgggctgtggaagcttttgccaaacagctgtgttttcaggatcagtatgtcaag
gccgcttctcacctactttccatccacaaagtgtatgaagctgtggcgctgctgaagtca
aaccatttttacagggaagctattgcagttgccaaggcccggctgcgtccagaggaccca
gtcctgaaggacttgtacctaagctggggaaccgtcctagaaagagatggccattatgcc
atagcagccaaatgctacttaggggccacttctgcttatgatgcagccaaagttttggcc
aaaaagggggatgcagcatcacttagaacagctgcagagttggctggcatcgtaggagag
gatgagttgtctgcttccctggctctcagatgtgcccaagagctgcttctggccaacaac
tgggtgggagcccaggaagccctgcagctgcatgcaagtctacagggtcagagattggtg
ttttgccttctggagctactattcaggcatctagaagaaaagcagctttcagaaggcaaa
agttcctcctcttatcacacttggaccataggcaccgaagggcctttcatggagagggtg
actgcagtgtggaagagcatcttcagccttgacacccctgagcagtatcaggaagccttt
cagaagctgcagaacatcaagtacccatctgctacaaataatacaccctccaaacagctc
ctgcttcatatttgccatgacttgaccctggcagtgctgagccagcagatggcctcctgg
gacgaggctgtgcaggcgttccttcgggcagtggtccggagctatgactcagggagcttc
accatcatgcaggaagtgtactcagcttttctccctgacggctgtgaccacctaaaagac
aaattggttgaccatcaatcccctgccataccagctttcaaaagtttggaggcctttttt
ctttatgggcgtctgtatgaattctggtggtctctctccaggccttgcccaaattccagt
gtctgggtaaggcctggtcacagcacattctctgttgagccaagccagcagttagacact
atcagcactgaagaaactgaccctgaaacttctcagccagagccaagcaggccttcagaa
ctagacttgagactcacaaaagaaggtgagcgaatactgagcacatttaaggcgctcctt
tcagaaaagcatgccagtctccaaaactcacagagaactgttgctgaagtccaagagacc
ttggcagaaatgatccgccaacaccagaagagtcaactctgtaaatccacagcaaatggt
cctgataagagtgaaccggacctagaagcagagcctctctccagttctcagagccagtgt
aaagaagaaaaaaacgagccactttctctgcctgaattaaccaaaaggcttacagaggcc
aatcagagaatggcgaaatttcccgagagtgttaaggcctggcccttcccggatgtgctg
gagtgctgcctcatcttccttctcatcaggttccactttcctgactgtctgacccaggaa
atgcagcagcaggcccaagagctccttcagaaatacggcaacactaaaacttaccaaagg
cactgccagaccttctgcacatga
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integrated database retrieval system
