Callithrix jacchus (white-tufted-ear marmoset): 100394665
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Entry
100394665 CDS
T03264
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01524
Platinum drug resistance
cjc03430
Mismatch repair
cjc05200
Pathways in cancer
cjc05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100394665 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100394665 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
100394665 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100394665 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100394665 (MSH2)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100394665 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
100394665
NCBI-ProteinID:
XP_035128510
Ensembl:
ENSCJAG00000000620
UniProt:
F7A2G4
LinkDB
All DBs
Position
14:complement(65110976..65198831)
Genome browser
AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTVHGEDALLAAREVFKT
QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDTSASIGVVGVRMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITEKKKADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLLDKNRIEERL
NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFLRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQKLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVYFEKN
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IECAKQKALELEEFQYVGESQGYDDMEPAAKRCFLEREQGEKIIQEFLSKVKQMPFTEMS
EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggcggaggtcggcttcgtg
cgcttctttcaaggcatgccggagaagccgaccactacggtgcgccttttcgaccggggc
gacttctatacggtgcacggcgaggacgcgctgctggcggcccgggaagtgttcaagacc
cagggggtgatcaagtacatggggccggcaggagcaaagaatctacaaagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctggttcgtcagtatagagtt
gaagtttataaaaatagagctggaaataaggcatccaaggagaatgactggtatttggca
tttaaggcttctcctggcaatctgtctcagtttgaagacattctctttggtaacaatgat
acgtcagcttccattggtgttgtgggtgttagaatgtccacagttgatggccagagacag
gttggagttggctatgtggattccatacagaggaagctaggactgtgtgaattccctgat
aatgatcagttctccaatcttgaggctctcctgatccagattggaccaaaggaatgtgtt
ttacctggaggagagactgctggagacatggggaaactgaggcagattattcaaagagga
ggaattctgatcacagaaaaaaaaaaagctgacttttccacaaaagacatttatcaggac
ctcaacaggttgttgaaaggcaaaaagggagaacagatgaatagtgctgtattgccagaa
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactatta
tctgatgattccaattttggacagtttgaactgactacttttgactttagccagtacatg
aaattggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagatacc
actggctctcagtctctggctgccttgctgaataagtgtaaaacccctcaaggacaaaga
cttgttaaccagtggattaagcagccccttttggataagaacagaatagaggagagattg
aatttagtggaagcttttgtagaagatgcagaattgaggcaaactttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaagtttctaagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttatacaggct
ctggaaaaatatgaaggaaaacaccagaaattgttgttggcagtttttgtgactcctctt
actgatcttcgttctgatttctccaagtttcaggaaatgattgaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaatctcagtgaa
ttaagagaaataatgaatgacttggaaaagaagatgcagtcaacattaataagtgcagcc
agagatcttggcttggaccctggcaaacagattaaactggattccagtgcacagtttgga
tattactttcgtgtaacctgtaaggaagaaaaagtccttcgtaacaataaaaactttagt
actgtagatatccagaagaatggtgttaaatttaccaacagcaaattgacttctttaaat
gaagaatataccaaaaataaaacagaatatgaagaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcaaacactcaatgatgtgttagct
caactagatgctgttgtcagttttgctcatgtgtcaaatggagcacctgttccatatgta
cgaccagtcattttggagaaaggacaaggaagaattattttgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgtatactttgaaaaaaat
aaacagatgttccacatcattactggccccaatatgggaggtaaatcaacatatattcga
caaactggggtgatagtacttatggcccaaattgggtgttttgtgccatgtgagtcagcg
gaagtgtccattgtggactgcatcttggcccgggtaggggctggtgacagtcaattgaaa
ggagtctccacattcatggctgaaatgttggaaactgcttctatcctcaggtctgcaacc
aaagattcattaataatcatagatgaattgggaagaggcacttctacctacgatggattt
gggttagcatgggctatatcagaatatatcgcaacaaagattggtgctttttgcatgttt
gcaacccattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactcaccactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgcgatcaaagttttgggattcatgttgcagagcttgctaatttccctaagcatgta
atagagtgtgctaaacagaaagccctggaactggaggagtttcagtatgttggagaatca
caaggatatgatgacatggaaccagcagcaaagaggtgctttctggaaagagagcaaggt
gaaaaaattattcaggagttcctgtccaaggtgaaacaaatgccctttactgaaatgtca
gaagaaaacatcacaataaagttaaaacagctaaaagctgaggtaattgcaaagaataat
agctttgtaaatgaaatcatttcacgaataaaagttactacgtaa
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