Callithrix jacchus (white-tufted-ear marmoset): 100394680
Help
Entry
100394680 CDS
T03264
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100394680 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cjc00536
]
100394680 (COL23A1)
Glycosaminoglycan binding proteins [BR:
cjc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100394680 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100394680
NCBI-ProteinID:
XP_035146580
Ensembl:
ENSCJAG00000012175
LinkDB
All DBs
Position
2:66998249..67361608
Genome browser
AA seq
544 aa
AA seq
DB search
MGPGESAGGGGDAGKGNAAGGGGRPARIAGSRAVSALCLLLSMGSAAACLLLGVQAAALQ
GRVAALEEERELLRRAGPPGSGAAWAEPHLERLLQEKLDGLVKLRTAREAPSECVCPPGP
PGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRGDQGQDGA
AGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGQKGSPGPKGEPGALGK
KGDDGTPGQPGPRGLPGPPGPKGEPGSMGPQGENGVDGAPGPKGEPGHQGADGAAGPRGA
PGLKGEQGDTVVIDYDGRILDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPK
GQKGDPGEPGPTGLKGEAGEMGLSGLPGADGLKGEKGESASDSLQESLAQLIVEPGPPGP
PGPPGPMGLQGIQGPKGLDGAKGEKGASGERGPSGLPGPVGPPGLIGLPGTKGEKGRPGE
PGLDGFPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPG
CWHK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggcccaggcgagagcgccggtggcggtggcgacgcggggaagggcaacgcggcgggc
ggcggaggccgcccggcgaggatcgccgggtcgcgggcggtaagcgcgctgtgcctgctg
ctctccatgggctccgcggccgcctgcctgctgctgggcgtccaagcggccgcgctgcag
ggccgggtggcggcgctcgaggaggagcgagagctcctgcggcgcgcggggccccccggc
tccggggccgcctgggcagagccgcacctggagcgtctgctgcaagagaagttggacgga
ctagtgaagctccggactgctcgggaagccccatctgaatgtgtctgccccccagggccc
cctggacggcgtggcaagcctgggagaagaggcgaccctggtcctccagggcaatcagga
cgagatggctacccgggacccctgggtctggatggcaagcctggacttcctggcccaaaa
ggggaaaagggtgcaccaggagacttcggcccccggggagaccaagggcaagatggagct
gctgggcccccagggccccctggacctcctggggcccggggccctcctggtgacactggg
aaagatggccccaggggagcacaaggcccagcgggccccaaaggagagccgggacaagat
ggcgagatgggccagaagggatccccagggcccaagggtgagcctggagcacttggaaag
aagggtgatgatgggacaccaggccagcctggaccacgaggactccctggaccaccaggg
cccaagggtgagccagggagcatggggcctcagggagagaatggcgtggatggtgcccca
ggaccaaagggggagcctggccaccaaggtgcggacggagctgcagggccccggggcgcc
ccaggcctcaagggagagcagggagacactgtggtgatcgactatgatggcagaatcttg
gatgccctcaaggggcctcccgggccacaggggcccccagggccaccagggatccctgga
gccaagggagagcttggattgcctggtgccccaggaatcgatggagagaagggtcccaaa
ggacagaaaggagacccaggagagccagggccaactggactcaaaggagaagcaggcgag
atgggcttgtctggcctcccgggtgccgacggcctcaagggggagaaaggggagtcagcg
tctgacagcctacaggagagcctggctcagctcatagtggagccagggccccctggcccc
cctggccccccaggccccatgggcctccagggaatccagggtcccaagggcttggatgga
gcaaagggagagaagggcgcgtcgggtgagagaggccccagtggcctgcctgggccagtt
ggcccaccaggccttattgggctgccaggaaccaaaggagagaagggcagacccggggag
ccaggactagatggtttccctggacctcgaggagagaaaggtgaccggagtgagcgtgga
gagaagggagagcgaggagttcccggccggaaaggagtgaagggccagaaaggggagccg
ggaccgccaggcttggaccagccgtgtcctgtgggccccgacgggctgcctgtgcctggc
tgctggcataagtga
DBGET
integrated database retrieval system
