Callithrix jacchus (white-tufted-ear marmoset): 100394786
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Entry
100394786 CDS
T03264
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X6
KO
K24885
homeobox-containing protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100394786 (HMBOX1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100394786 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
CUT
HTH_24
HTH_31
HTH_37
HTH_26
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
100394786
NCBI-ProteinID:
XP_008977302
Ensembl:
ENSCJAG00000015654
UniProt:
U3DHA5
LinkDB
All DBs
Position
13:complement(9524788..9698095)
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AA seq
420 aa
AA seq
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MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDK
FGRRSSYGGSSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
NNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRP
APIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttcctttccagtggttttgctggaaaccatgtctcattatacagatgaaccc
agatttaccatagagcagatagatctgcttcagcgccttcggcgtactggaatgactaaa
catgaaattctccatgccttggaaactttggatcgtcttgatcaagagcatagtgacaag
tttggaagaaggtccagctatggaggaagttcatatgggaatagtaccaacaatgtccca
gcatcttcctctacagctacagcttccacacagacgcagcattcgggaatgtccccatca
cctagcaacagttatgatacttccccacagccttgcactaccaatcaaaatgggagagag
aataacgagcgattatctacgtccaatggaaagatgtcaccaactcgctaccatgcaaac
agcatgggtcagaggtcatacagttttgaagcctcagaagaggacctagatgtagatgat
aaagtggaggaattaatgaggagggacagcagtgtgataaaagaggaaatcaaagccttt
cttgccaatcggaggatttcccaagcagttgttgcacaggtaacaggtatcagtcagagc
cggatctctcactggctgttgcagcagggatcagacctgagtgaacagaagaaaagagca
ttttaccgatggtatcaacttgagaagacaaaccccggggctacgctaagtatgagacca
gcccccattccaatagaggaccctgaatggagacaaacacctcccccagtgtctgccaca
tctggtactttccgactacgacgagggagtcgatttacctggagaaaggagtgcctggct
gttatggaaagttacttcaatgagaatcaatacccagatgaagcaaagagggaagaaatt
gcaaacgcttgcaatgcagttatacagaagccaggtaaaaaactgtctgatctggaaaga
gttacctccctgaaagtatataattggtttgctaacagaaggaaggagatcaagaggaga
gccaatattgaagcagcaatcctggagagtcatgggatagatgtgcagagtccaggaggc
cactccaatagtgatgatgtcgatgggaatgactactctgagcaggatgacagtacgagc
catagtgaccaccaagaccccatctcattagctgtggaaatggcagcagtcaaccacact
atcttggcattggcccgacaaggagccaacgaaatcaagacagaggccctggatgatgac
tga
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