Callithrix jacchus (white-tufted-ear marmoset): 100394908
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Entry
100394908 CDS
T03264
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04390
Hippo signaling pathway
cjc04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100394908 (LIMD1)
04392 Hippo signaling pathway - multiple species
100394908 (LIMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100394908 (LIMD1)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100394908 (LIMD1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100394908 (LIMD1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
100394908 (LIMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf-ChsH2
Motif
Other DBs
NCBI-GeneID:
100394908
NCBI-ProteinID:
XP_035130947
UniProt:
A0A5F4VYJ5
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All DBs
Position
15:22088212..22174464
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AA seq
667 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGAGNNPEFEETRRVFATKMAKIHLQQQ
QQLLQEETLPRGSRGPVNGGGRLGLQAHREAGAGSRLTLDGAAKPPLAASTGAPGAATTL
AAGQPPCPPQEQRARPYLHGTRHGSQDCGSRESPASSEMSAFQQPGPCEDPSCLTHGDYY
DNLCLASPKWGDKPGVSPSVGLGVGSGWPRPPGSDPSLPKPCGDHPLNQRQLPLSSSRSS
EGSLGGQDTGISGRSIEKPAGLWSTASSQRVSPGLPSPNLENGAPALGPAQPRIPSVSAP
LALSCPRQGGLPRTNSGPGGEVSSVVSKPNVDPQAWFHDGPKSYLSSSAPSSSPAGLDGS
QSGAVPGLGTGPKLSSTSLVHPVMSTLPELSCKEGPLGWSSDSSLGPVLLEGPSSPRVRL
PCQPLVPGPELRPSAAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVFGAGQACQAM
GNLYHDTCFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMIL
QALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPPEG
SDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEKRTSST
ALHQHHF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggataagtatgacgatctgggcctggaggccagtaaattcatcgaggacctgaacatg
tatgaggcctccaaggatgggctcttccgagtggacaagggtgcaggcaacaaccccgag
tttgaggaaactcgcagggtgttcgccaccaagatggccaaaatccacctccagcagcag
cagcagctcctgcaagaggagaccctgccccgggggagcagaggccctgtcaatggaggg
ggccgcctgggcctgcaagcccatcgggaagctggtgcgggcagcaggctgactctggat
ggtgctgccaagccccctcttgctgcctcgacaggggcacctggggcagccaccaccctc
gctgctgggcagcccccgtgcccaccgcaggagcagagagccaggccatacctgcatggc
acaaggcatggcagccaggactgtggttccagggagagcccagccagttctgagatgtct
gctttccagcagccaggcccctgcgaggatccttcctgcctcactcatggagactattac
gacaacctctgcttggccagtcctaagtggggtgacaaaccaggagtgtcccctagcgtt
ggcctgggtgtagggagcgggtggcctagacccccagggagtgacccatcactgcccaaa
ccctgcggggaccatcccctaaaccagcgacagctccccctgagctccagcaggtcttct
gagggtagcctcggtggtcaggatactggcattagtggccgcagcatcgagaagccagca
ggtctttggtccactgcctcctcccagcgagtgagccctggcttgccttccccaaatttg
gagaatggagctccagccctggggcctgctcagcccaggatcccttctgtgtcagcaccc
ctggccctgagctgccccaggcaaggaggtcttccaagaacaaactcagggccagggggt
gaggtttcaagtgtggtgtccaaacccaatgtggacccccaagcctggttccacgatggt
cccaaatcttacctttcgagttctgccccgtcatcctcacctgctggcctggacggttca
caatcgggtgcagtccctgggctgggcactggtcccaagctcagctccaccagccttgtc
catccagtgatgtccaccctgcctgagttatcttgtaaagagggtcccctgggctggtcc
tctgatagcagcctgggacctgtgctcctggagggccccagctcccctagggtaaggctg
ccctgtcagcccctcgtcccaggtcctgagctgagaccctcggccgctgagttgaaatta
gaagccctcacccaacgtctggagcgagagatggatgctcacccgaaggccgattacttt
ggagcctgtgtgaaatgcagcaaaggggtgttcggggctggccaggcctgccaggccatg
gggaacctctaccatgacacatgcttcacctgtgcagcttgcagccggaagctgagagga
aaagccttttattttgtcaatggcaaagtgttttgtgaagaagacttcctgtactctggt
ttccagcagtcggctgacaggtgttttctttgtggacatctgatcatggacatgatccta
caggccctggggaagtcctaccaccccggctgtttccgctgtgtcatctgtaatgagtgt
ttggatggagtgcccttcaccgtagactcagagaacaagatctactgtgtccgagattac
cacaaggtgctggcccccaagtgtgcagcctgcgggcttcccatccttccacctgagggc
tcagacgagaccatccgtgttgtgtccatggacagagactaccacgtggagtgttaccac
tgtgaggactgtggtctggagctcaatgatgaagatggccatcgctgttatccgctggag
gatcacctgttctgtcactcctgccacgtgaagaggctggagaagagaacctcgtccaca
gcccttcaccagcaccacttctag
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