KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100395183
Entry
100395183         CDS       T03264                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100395183 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjc03021]
    100395183 (TAF5L)
   03036 Chromosome and associated proteins [BR:cjc03036]
    100395183 (TAF5L)
Transcription machinery [BR:cjc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100395183 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     100395183 (TAF5L)
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100395183 (TAF5L)
    STAGA complex
     100395183 (TAF5L)
    TFTC complex
     100395183 (TAF5L)
    SAGA complex
     100395183 (TAF5L)
    SLIK complex
     100395183 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd TFIID_NTD2 WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40 RMC1_N Tricorn_2nd Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN Beta-prop_IP5PC_F Ge1_WD40 WD_LRWD1 Nbas_N Mala_s_1-like vATP-synt_AC39
Other DBs
NCBI-GeneID: 100395183
NCBI-ProteinID: XP_008983536
Ensembl: ENSCJAG00000010986
UniProt: U3F810
LinkDB
Position
19:17124138..17156830
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCRVLTLHIHLDVQPAKRTDYQLYASGSSSRSENNGLEPPDMPSPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR
NTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgagtgcgtaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtatgtggactcagatggtcccctgaaacaaggactgcggctgtcacagactgctgaa
gagatggcggccaatctcacggtgcaatcagaatctggttgtgccaacatagtgtctgca
gccccttgccaggcagaaccccagcaatatgaagtacagtttggacgactgcggaatttt
ctcaccgattctgattcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccagaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaacgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaagaagacagctacaactaccttatccgctacctccaa
agtgacaacaatactgccctgtgcagagtcctcaccttacatattcatcttgacgtgcag
cctgccaagagaacagactaccagctgtatgccagtggcagctcctcccgcagtgagaac
aacggcttggagccccctgacatgcccagccctattctacagaatgaggctgccctggag
gtcttacaggagagcattaagcgcgtcaaagatgggcctccctccctcactaccatctgc
ttctatgccttctataacacagagcagctgttgaacactgcagaaatctcccccgatagc
aaactacttgccgctgggtttgacaactcctgtataaaactttggagtttacgatccaag
aagttaaaatcagagccccatcaagtagacgtgtcccgcatccatttggcttgtgatatt
ctggaggaggaggatgatgaggatgataacgcaggcacagagatgaagatacttcgggga
cactgcggaccagtatacagcacgaggttcctcgcggacagctcagggttgctctcttgt
tctgaagacatgtccatcagatactgggatctggggagtttcaccaacactgtgttgtac
caaggacatgcctatcccgtgtgggatctggacatcagtccatatagcctgtacttcgcc
agtgggtcccacgaccgcaccgccaggctgtggtcatttgatcggacgtacccactgagg
atatatgcaggacacctggcagatgtggactgtgtcaaattccaccctaattcaaactac
ttagctacgggctcaaccgacaagaccgtccggctgtggagtgctcagcaggggaactcg
gtgaggcttttcacaggccaccgtggccccgtgctttctcttgccttttctcctaacggt
aagtacttggcgtctgctggcgaggaccagcggttgaagctgtgggacttggcctctggg
accctttataaagagctgagaggccacacagacaatatcaccagcctcaccttcagtcca
gacagcggcttgattgcctctgcctccatggacaactcagtgcgcgtctgggacatcagg
aatacttactgcagtgcacctgccgacggctcctccagtgagctcgtgggtgtgtacacc
gggcagatgagcaacgtcttgagcgtgcagttcatggcctgtaaccttcttctggtgact
ggaattacacaagaaaatcaggaacattaa

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