Callithrix jacchus (white-tufted-ear marmoset): 100395205
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Entry
100395205 CDS
T03264
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X2
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cjc01001
]
100395205 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100395205 (TRIM28)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100395205 (TRIM28)
Protein kinases [BR:
cjc01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
100395205 (TRIM28)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100395205 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-B_box_Trim66
zf-RING_2
PHD-1st_NSD
PHD_2
YaaC
Motif
Other DBs
NCBI-GeneID:
100395205
NCBI-ProteinID:
XP_008987100
Ensembl:
ENSCJAG00000000240
UniProt:
U3E3Y4
LinkDB
All DBs
Position
22:49781196..49808371
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AA seq
834 aa
AA seq
DB search
MAASAAAASAAAASAASGSPGPGEGSAGGEKRSTASSAAGSASASAAASSPAGGGAEALE
LLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPASANSSGDGGAAGDGAVVDCPVC
KQQCFSKDIVENYFMRDSGSKTATDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEA
HQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDH
QYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAIL
QIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTA
LLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGP
APMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSGEGEVSGL
MRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQPGTVPAGT
PGAPPLAGLAIVKEEETEAAIGAPPAATEGPETKPVLMALPEGPGTEGPRLASPSGSTSS
GLEVVAPEGTSAPGGGPGTLDDSATICRVCQKAGDLVMCNQCEFCFHLDCHLPALQDVPG
EEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPVNQRKCERVLLALFCHEPCRPLH
QLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKAD
VQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPMSLPGAGLSSQELSGGPGDGP
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctcggcagcagcggcctcggccgcctctggcagcccc
ggcccgggtgagggctccgctggcggcgaaaagcgcagcaccgcctcttcggccgcaggc
tcggcgtcggcctcggccgcggcgtcgtcgcccgcggggggcggtgccgaggcgctggag
ctgttggagcactgcggcgtgtgcagagagcgcctgcgacccgagagggagccccgcctg
ctgccttgtttgcactcggcctgtagtgcctgcctaggccccgcggcgcccgcttccgcc
aacagttcgggggacggcggggcggcgggagacggcgcagtggtggactgtcccgtatgc
aagcaacaatgcttctccaaagacatcgtggagaattatttcatgcgtgacagtggcagc
aagactgccaccgacgcccaggatgcgaaccagtgctgcactagctgtgaggataatgcc
ccagccaccagctactgtgtggagtgctcggagcctctgtgtgagacctgtgtagaggca
caccagcgggtgaagtacaccaaggatcacactgtgcgctctactgggccagccaagtct
cgggatggtgaacgtaccgtctattgcaacgtacacaagcatgaaccccttgtgcttttt
tgcgagagctgtgatactctgacctgccgagactgccagctcaatgcccacaaggaccac
cagtaccagttcttagaggatgcagtgaggaaccagcgtaagctcctggcctcactggtg
aagcgccttggggacaaacatgcaacattgcagaagagcaccaaggaggttcgcagctcg
atccgccaggtgtctgacgtacagaagcgtgtgcaagtggatgtcaagatggccatcctg
cagatcatgaaggagttgaataaacggggccgtgtgctggtcaacgatgcccagaaggtg
actgaggggcagcaggagcgcctggaacggcagcactggaccatgaccaagatccagaag
caccaggagcacatcctgcgctttgcttcttgggctctggagagtgacaacaacacagcc
ctcctgctttctaagaagttgatctacttccagctccaccgggccctcaagatgattgtg
gatcctgtggagccacatggcgagatgaagtttcagtgggacctcaatgcctggaccaag
agtgccgaggccttcggcaagattgtggcagagcgtcctggcactaactcgacaggccct
gcacccatggctcctccaagagccccagggccactgagcaagcagggctctggcagcagc
cagcctatggaggtgcaggaaggctatggctttgggtcagatgatccctactcaagtgca
gagccccatgtatcaggtgtgaaacggtcccgctcaggtgagggcgaggtgagcggcctt
atgcgcaaggtcccacgagtgagccttgaacgcctggacctggacctcactgctgacagc
cagccacccgtcttcaaggtcttcccaggcagtaccactgaggactacaaccttattgtt
attgaacgtggcgctgctgctgcagctgccggccagccagggactgtgcctgcaggaacc
cctggggccccacccctggctggcctggccattgtcaaggaggaggagacggaggctgcc
attggagcccctcctgctgccactgagggccctgagaccaaacctgtgcttatggctctt
ccggagggtcctggtaccgagggtcctcgcctggcctcacccagtggcagcaccagctca
gggctggaggtggtggctcctgaaggtacctcagctccaggtggtggtccgggaaccctg
gatgacagtgccaccatttgccgtgtctgccagaaggcaggtgatctggtcatgtgcaac
cagtgtgagttttgtttccacctggactgccacctgcctgccttgcaggatgtgccaggg
gaggagtggagctgctcactctgccatgttctccctgacctgaaggaggaggatggcagc
ctcagcctggatggtgcagacagcactggcgtggtggccaagctctcgccagtcaaccag
cggaaatgtgagcgtgtactgctggccctgttctgtcatgagccctgccgccccctgcat
cagctggctaccgactccaccttctccctggaccagcctggtggcaccctggatctgacc
ctgatccgtgcccgtctccaggagaagttgtcacctccctatagctccccacaggagttt
gcgcaggatgtgggccgcatgttcaagcaattcaacaagttaactgaggacaaggcagac
gtgcagtccatcatcggcctgcagcgcttcttcgagacgcgcatgaacgaggccttcggc
gacaccaagttctctgctgtgctggtggagcccccgccgatgagcctgcctggtgctggc
ctgagttcccaggagctgtctggtggccctggtgatggcccgtga
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