Callithrix jacchus (white-tufted-ear marmoset): 100395279
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Entry
100395279 CDS
T03264
Symbol
ITGB5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04145
Phagosome
cjc04148
Efferocytosis
cjc04151
PI3K-Akt signaling pathway
cjc04510
Focal adhesion
cjc04512
ECM-receptor interaction
cjc04810
Regulation of actin cytoskeleton
cjc04820
Cytoskeleton in muscle cells
cjc05165
Human papillomavirus infection
cjc05205
Proteoglycans in cancer
cjc05410
Hypertrophic cardiomyopathy
cjc05412
Arrhythmogenic right ventricular cardiomyopathy
cjc05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100395279 (ITGB5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100395279 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100395279 (ITGB5)
04148 Efferocytosis
100395279 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100395279 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100395279 (ITGB5)
04810 Regulation of actin cytoskeleton
100395279 (ITGB5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100395279 (ITGB5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100395279 (ITGB5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100395279 (ITGB5)
05412 Arrhythmogenic right ventricular cardiomyopathy
100395279 (ITGB5)
05414 Dilated cardiomyopathy
100395279 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100395279 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100395279 (ITGB5)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100395279 (ITGB5)
Cell adhesion molecules [BR:
cjc04515
]
Integrins
Integrin beta subunits
100395279 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
EGF_2
I-EGF_1
vWA_SIBA-E
EGF_TEN
EGF_Teneurin
SCO4226-like
Motif
Other DBs
NCBI-GeneID:
100395279
NCBI-ProteinID:
XP_002758770
Ensembl:
ENSCJAG00000006606
UniProt:
U3FGD5
F7GMY8
LinkDB
All DBs
Position
15:72109857..72235764
Genome browser
AA seq
799 aa
AA seq
DB search
MPRAPAPLYACLLGLCALLPRLAGLNICASGSATSCEECLLIHPKCAWCSKEDFGSPRSV
ISRCDLRANLMRNGCGGQMESPASSSRVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLAEEMRKLTSNFRLGFG
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDKVDSFNEEVRKQRVS
RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLADNNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSVEARSCPSRHMEHVFTLRPVGFRDSLAVGVTYNCTCGCSVKLKPNSTSCSGSG
TYVCGLCECNAGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GKIYGTFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRNKDGQ
ICSDRGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
CRDEVITWVDTIVKDDQEAVLCFYKTPKDCVMMFTYAELPSGKSSLTVLREPECGNTPNA
MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
HTVDFTFNKFNKSYNGTVD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggccccagcgccgctgtacgcctgcctcctggggctctgcgcgctcctgccc
cggctcgcaggtctcaacatatgtgctagtggaagtgccacctcatgtgaagaatgtctg
ctaatccacccaaaatgtgcctggtgctccaaagaggactttggcagcccacggtcagtc
atctctcggtgtgatttgagggcaaaccttatgagaaatggttgtggaggccagatggag
agcccagccagcagctcccgtgtcctgcggagcctgcccctcagcagcaaaggttccggc
tccgcaggctgggatgtcattcagatgacgccgcaggagattgccgtgaacctccggccg
ggtgacaagaccaccttccagctgcaggttcgccaggtggaggactatcctgtggacctg
tattacctgatggacctctccctgtccatgaaggatgacttggacaatatccggaatctg
ggcaccaaactcgcagaggagatgaggaagctcaccagcaacttccggttggggttcggg
tcttttgtcgataaggacatttctcctttctcctacacggcaccgaggtaccagaccaat
ccatgcattggttacaagttgtttccaaattgcgtcccctcctttgggttccgccatctg
ctgcctctcacagacaaagtggacagcttcaatgaggaagttcggaaacagagggtgtcc
cggaaccgagatgcccctgagggaggctttgatgcagtactccaggctgctgtctgcaag
gagaagattggctggcgaaaagatgcactgcatttgctggtgttcacaacagacgatgtg
ccccacatcgcattggatggaaaactgggaggcctggtgcagccacacgatggccagtgc
cacctgaatgaggccaacgagtacactgcatccaaccagatggactatccatcccttgcc
ttgcttggagagaaattggcagataacaacatcaacctcatctttgcagtgacgaaaaac
cattatatgctgtacaagaattttacagccctgatacctggcacaacggtggagatttta
gacggagactccaaaaatattattcagctgattattaatgcatataacagtatccggtct
aaagtggagctgtcggtctgggatcagcctgaggatcttaatctcttcttcactgctacc
tgccaagatggggtatcctaccctggtcagaggaagtgtgagggcctgaagattggggac
acggcatcctttgaggtgtcagtggaggcccgaagctgccccagcagacacatggagcat
gtgttcaccctgcggccagtgggattccgggacagcctggcagtgggggtcacctataac
tgcacatgtggctgtagcgtgaagctgaaaccgaacagcaccagctgcagcgggagcgga
acctatgtctgcggcctgtgtgagtgcaacgccggctacctgggcaccaggtgcgagtgc
caggatggggagaaccagagcgtgtaccagaacctgtgccgggaggcagagggcaagccg
ctgtgcagcgggcgtggggagtgcagctgcaaccagtgttcctgcttcgagagtgagttc
gggaagatctatgggactttctgtgagtgcgacaacttctcctgtgccaggaacaaggga
gtcctctgctcaggccatggcgagtgtcactgcggggaatgcaagtgccacgcaggttac
atcggggacaactgtaactgctcgacagacatcagcacatgccggaacaaagatggccag
atctgcagtgaccgcgggcactgtctctgtgggcagtgccagtgcacagagccgggggcc
tttggggagatgtgtgagaagtgccccacctgcccggatgcatgcagcaccaagagagat
tgcgtcgagtgcctgctgctccactccggaaaacctgacaaccagacctgccacagcctg
tgcagggacgaggtgatcacgtgggtggacaccatcgtgaaagatgaccaggaggctgtg
ctttgtttctacaaaacccccaaggactgcgtcatgatgttcacctacgcggagctcccc
agtgggaagtccagcctgacggttctcagggagccagagtgcggaaacacccccaacgcc
atgaccatcctcctggctgtggttggcagcatcctcctggttgggcttgcactcctggct
atctggaagctgcttgtcaccatccatgaccggagggagtttgcaaagttccagagcgag
cgatccagggcccgctatgaaatggcttcaaacccactgtacagaaagcccatctccacg
cacaccgtagacttcaccttcaacaagttcaacaaatcctacaatggcactgtggactga
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integrated database retrieval system
