Callithrix jacchus (white-tufted-ear marmoset): 100395301
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Entry
100395301 CDS
T03264
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc03250
Viral life cycle - HIV-1
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100395301 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100395301 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100395301 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100395301 (NUP153)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100395301 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
100395301
NCBI-ProteinID:
XP_002746241
Ensembl:
ENSCJAG00000006685
UniProt:
F7EHG8
LinkDB
All DBs
Position
4:11624623..11700835
Genome browser
AA seq
1470 aa
AA seq
DB search
MASGAGGVGGGGGGKIRMRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQKYFN
KNEDVCSCSTDTSEIPRWPENKEDHLIYANEDSSNITDGRITPEPAVSNTEEPSTTSTAS
NYPDVLTRPSLHRSHLNFSMLESSALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
ISTTSGFSSRASDKDIAVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDVTDFQAKREKVDSQ
YPPVQRLMTPKPVSIATNRSVYFKPSLTPTGEFRKTNQRIDKKCSTGYEKNTTPGQNREQ
QESGFSYPNFSLPAANGLSSGGGKMRRERTRFVASKAPEKEEMEVPVLPKISLPITSSSL
PTFNFSSPGITASSPSPISSSQSLTNKVQMTSPSGTGSPMFRFSSPIVKSTEADVLPPSS
IGFTFSVPVAKTAELPGSSSTVESVLSSSAEDVTAVNSRSCKKKTPAEDCEGPFRPAKIL
KEGSVLDLLKSPGFASPKIDSLAAQPTTTSPLVYTRPAISSFSSSGTGFGESSKAGSSWQ
CDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPVI
GTWDCDTCLVQNKPEVVKCVACETPKPGTGVKRVLTLTVVSESAETVTASSSSCTVTTGT
LGFGDKFKRPVGSWECSVCCVSNNAEDNKCVSCMSEKPGNSVPTSSSSTVPVSLSSEGSL
GLEKFKKPEGSWECDVCLVQNKADSTKCVACESAKPGTKSEFKGYDTSSSSLNPAASSSF
KFGIPSSSSGPSQTLTSTGNFKFGDQGGFKISVSSDSGSGNPVSEGFKFSKPIGDFKFGV
SSESKPEEVKKDNKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQQEKKEELPKSSSAGFS
FGTGVINPTPAAANTLVTSENKSSFNFGTIETKSASVAPFTCKTSEAKEEMPATKGGFTF
GNMEPASPPSATVFVLGRTEEKQQEPVTSTSLVFGKKADSEEPKCQPVFSFGNSEQTKDE
NSSKSTFSFNVTKPSEKESEQPAKATFAFGAQTSTTTDQGASKPVFNFLNNSSSNSSTPA
TSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNSAESSTSQSLLFSQDSKLATTS
STGTAVTPFVFGPGASSNSTATSGFSFGATTTSSSAGSSFVFGTGPSVPSASPAFGANPT
PTFGQSQGASQPNPPGFGSISSSTALFSTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFG
SGTTANSSSVFQFGSSTTNFNFTNNNPSGVFTFGANSSTPAASAQPSGSGGFPFNPSPAF
TVGSNGKNVFSSSGTAVPGRKIKTAVRRRK
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggagccggaggagtcggagggggcggtggcggcaagatccggatgcggcgt
tgccatcaggggccaattaagccttaccagcaggggcgacaacagcaccagggcattctt
agcagggttacagaatctgttaagaatattgtgccagggtggctacaaaaatacttcaac
aagaatgaagatgtatgcagctgttcaacagacacaagtgagattccacgctggccagaa
aataaagaggaccatttgatatatgccaatgaggacagctctaacattactgatgggaga
atcacacctgagccagcagtcagtaatacagaagaaccttcaacaactagtactgcttca
aattatccagatgtgttaacaaggccttctcttcatcggagtcatctgaatttctctatg
ttggaatcctctgcattgcactgtcagccgtctacatcctcggcattcccaattggcagt
tcgggattttcccttgtaaaggaaattaaagattctacctcgcagcatgatgatgataac
atctcaactaccagtggtttttcttcaagagcttctgataaagatatagctgtttcaaag
aacacttcattgccacctctgtggtccccagaagctgaacgttctcactcactctcacag
cacactgccaccagctcaaaaaaaccagcattcaacttgtctgcctttggaacactttcc
ccttcacttgggaattcttcaatccttaagacgagtcagcttggagattctcctttttat
cctggaaaaacaacatatggtggggcagcagctgctgtaagacagtctaaactacgaaat
acaccttatcaggcaccagttagaagacagatgaaagctaagcaactcagtgcacaatct
tatggtgtgaccagttcaacagctcggcgaatattgcagtctttagagaagatgtcaagc
cctttagcggatgcaaaaagaattccatccattgtttcttctcctctgaattctcctctt
gataggagtgggatagatgtcacagattttcaggccaaaagagaaaaggtggattctcag
tatcctcctgttcagagacttatgaccccaaagccagtttccatagcaacaaatcgaagt
gtttattttaaaccctctctgactccaactggtgaattcaggaagactaatcaaagaata
gataaaaagtgcagtactggatatgaaaaaaatacgacaccaggacaaaatagagaacaa
caagaaagtggcttttcatatccaaatttcagtttacctgcagccaatggtttatcttct
ggaggtggcaagatgagacgagaaaggacacgctttgttgcttctaaagctccagagaaa
gaggaaatggaagttccagtattaccgaaaatctctctaccgatcaccagttcttcactg
cctacctttaatttcagttcccctggaatcacagcttcctctccatcacccatcagttcg
tctcaatcattaacaaacaaggtacagatgacctctccgagcggcactggcagtcccatg
tttagattttcatctccaatcgtaaaatctactgaggcagatgtactacctccatcatct
atcggatttacatttagtgtgcctgttgcaaaaacagcagaacttcctggttctagtagt
actgtagaatcagttttaagtagttcagctgaagatgtgactgcagtgaacagtagaagt
tgtaagaagaagacaccagctgaagattgtgagggtccttttagaccagcaaaaatcctg
aaagaaggaagtgttctagatcttctaaaaagccctggttttgcatcaccgaagatagat
tctcttgctgctcagcctaccacaacaagcccactagtttatacaagaccagcaataagt
agcttttcttcaagtggaactgggtttggggaaagttcaaaagctgggtcatcatggcag
tgtgatacatgtctactccagaacaaagttacagacaacaaatgcatagcctgtcaagca
gcaaaattgtcacccagagatactgctaaacagactggaattgaaacaccaaataaaagt
ggcaaaaccactctttctgcatcagggacaggctttggagacaagtttaaaccagtgata
ggcacttgggattgtgatacctgtttagtgcaaaataaacctgaagtggtaaaatgtgta
gcctgtgaaacaccaaaacctggaactggtgtgaagcgagtccttacattgacagtggtt
tctgaaagtgctgagactgtgactgcttcatcttctagctgcactgtgaccactggtacc
ttaggatttggagataaattcaaaaggcccgttggatcttgggagtgttcagtatgctgt
gtttctaataatgcagaagacaataagtgtgtgtcctgtatgtctgagaaaccaggaaat
tcagtacctacttcaagtagcagcactgtacctgtttctctgtcttctgagggttctcta
ggattggaaaagttcaagaaacccgagggaagctgggagtgtgatgtgtgcctagtgcag
aataaggcagactctaccaaatgtgtggcatgtgaaagtgcaaagccaggcacaaaatct
gaatttaaaggctatgacacatcttcctcatctttgaacccagcggcctcctcatccttc
aaatttggtatcccatcatcctcttctgggccttctcagactttaacaagcactggaaat
tttaaatttggagatcagggaggattcaaaataagtgtgtcctctgattctgggtctgga
aaccctgtgagtgaaggctttaaattttctaaaccaataggagattttaaatttggagtt
tcatctgaatctaagcctgaagaagttaaaaaagacaataagaatgataattttaagttt
ggactttcttctggtttaagcaacccagtttctttaactccatttcaatttggggtatct
aatcttggacagcaagaaaagaaagaggaactgcccaaatcttcatctgcaggttttagc
tttggtacaggtgttattaaccccacccctgctgctgctaacaccttagtgacctctgag
aacaagagcagtttcaactttggaaccatagaaacgaagagtgcttcagtggctcctttc
acatgtaagacatcagaagctaaagaagaaatgcctgccaccaaaggagggttcactttt
ggcaatatggaacctgcctctccgccatctgccacagtgtttgttttgggaaggacggaa
gaaaaacagcaagagcctgtcacttctacttccttagttttcgggaagaaagctgacagt
gaagagccaaagtgtcaaccagtgttttcctttgggaattcagagcaaaccaaagatgag
aattcttcaaagtccacatttagttttaatgtgacaaaaccatctgagaaggaatctgaa
cagccagcaaaagccacttttgcctttggagctcaaactagtactacaactgatcaaggt
gcatcaaagccagtttttaatttcttgaacaacagttcctctaattcaagtacaccagcc
acttctgctggtggtggcatatttggtagttccacctcttcctccaatccgcctgtagct
acctttgtatttggacagtccagcaatcctgtgagcagctctgcctttggtaactctgct
gaatccagcacctctcagtcgctgctattttctcaagatagcaaactagcaaccacatcc
agcacaggtacagctgtcaccccctttgtctttggtccaggagccagcagtaatagtact
gccacctctggtttcagctttggagccacaaccacatctagctctgcaggatcctccttt
gtatttggaactggaccctcagtaccttctgccagtccagcatttggtgctaacccgacc
ccaacatttggacaaagtcaaggtgccagccagcctaatcctccaggctttggatctata
tcatcttccacagcattattttccactggttctcagcctgcaccgcctacttttgggaca
gtgtcaagcagtagccagcctcctgtgtttggacagcaacctagtcagtctgcatttggc
tctggaacaactgctaattccagttcggttttccagttcggcagcagcactacaaatttc
aacttcacaaacaacaatccatcaggagtgttcacatttggtgcaaattctagcacacct
gcagcctcagcccagccttcaggctcggggggctttccgtttaacccgtctccagcattt
acagtggggtcaaatgggaaaaatgtgttctcatcttctggaactgcagtccctggccgc
aagataaagactgctgttagacgcagaaaataa
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integrated database retrieval system
