Callithrix jacchus (white-tufted-ear marmoset): 100395323
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Entry
100395323 CDS
T03264
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04136
Autophagy - other
cjc04140
Autophagy - animal
cjc05010
Alzheimer disease
cjc05014
Amyotrophic lateral sclerosis
cjc05016
Huntington disease
cjc05017
Spinocerebellar ataxia
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100395323 (WIPI1)
04136 Autophagy - other
100395323 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100395323 (WIPI1)
05014 Amyotrophic lateral sclerosis
100395323 (WIPI1)
05016 Huntington disease
100395323 (WIPI1)
05017 Spinocerebellar ataxia
100395323 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
100395323 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100395323 (WIPI1)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100395323 (WIPI1)
Membrane trafficking [BR:
cjc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100395323 (WIPI1)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100395323 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
ANAPC4_WD40
WDR55
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
DUF5711
Beta-prop_WDR35_TULP_N
EIF3I
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
100395323
NCBI-ProteinID:
XP_002748706
Ensembl:
ENSCJAG00000000236
UniProt:
F7H3D8
LinkDB
All DBs
Position
5:complement(120596751..120634419)
Genome browser
AA seq
444 aa
AA seq
DB search
MEAEVADAPPGGVESALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEHLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDVPANPTGLCALSINHSNSYLAYPGSLTSGEIVLYDGNSLKTVC
TIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKVYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEQVTNSRPEEPSTWSGYMGKMFMAATNYLPTQVSDMMHQ
DRAFATARLNFSGQRNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
GSGTEENKNDLRPSLPQSYAATVARPSASSASTVPGYSEDGGALRGEVIPEHEFATGPVC
LDDENEFPPIILCRGNQKGKTKQS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagaggtcgcggacgctcccccgggcggggtcgagtcggcgctcagctgcttc
tcattcaaccaggactgcacatccctagcaattggaactaaagccgggtataagctgttt
tctctgagttctgtggagcatctggatcaagtccatggaagcaatgaaatcccggatgtc
tacatcgtggagcgcctcttttccagtagcctggtggtggtggtcagtcacacaaaaccc
cggcaaatgaacgtgtaccacttcaagaaaggcacggagatctgtaattacagctactcc
agcaacatcttgtccataaggctgaaccggcaaaggctgctggtttgcctagaagagtcc
atttatattcacaacattaaggacatgaagctgttgaagactctcctggatgttcctgca
aacccaacaggtctatgtgctctctctatcaaccattccaattcttacttggcctatccc
ggaagcctgacttcaggcgagattgtgctttatgatggaaactccctgaaaacagtctgc
actattgctgcccacgaggggacgctggctgccatcaccttcaatgcctcaggctccaaa
ctagcaagtgcatctgaaaaaggcacggtcatccgggtgttctccgtccctgatgggcaa
aaggtctatgagttccggagagggatgaaaaggtatgtgacaatcagctctctagtgttc
agcatggactcacaattcctctgtgcctccagtaacactgagacagtgcacatcttcaag
ctggaacaggtcaccaacagtagaccagaagagccttcgacctggagtggctacatggga
aagatgttcatggctgctaccaactacctccccacccaggtgtcagatatgatgcatcag
gacagggcttttgccaccgcacgtttgaatttctctgggcagaggaacatctgcacactc
tcaacgatccagaagttgccaaggctgctagttgcatcatctgacggacacctttatatc
tacaatttggatcctcaggacggaggagagtgtgtcttaatcaaaacccacagcttgctt
ggctcaggaacagaagagaataaaaatgacctcagaccttccttacctcagtcttacgca
gcaactgtagccagaccaagtgcatcttcagcctctacggtgccaggttattccgaggat
ggtggggccctgcgaggagaagttattcctgaacatgagtttgcaacgggaccagtgtgt
cttgatgatgagaatgaattccctcctataatcttgtgccgtggaaatcagaagggcaaa
acgaagcagtcatga
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integrated database retrieval system
