Callithrix jacchus (white-tufted-ear marmoset): 100395406
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Entry
100395406 CDS
T03264
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100395406 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100395406 (ARFGEF1)
Membrane trafficking [BR:
cjc04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
100395406 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
100395406
NCBI-ProteinID:
XP_035132296
Ensembl:
ENSCJAG00000004730
UniProt:
U3BBV1
LinkDB
All DBs
Position
16:complement(21356342..21505062)
Genome browser
AA seq
1849 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKA
GSSTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQHHHLLQSPVSHHE
PESPQLRYLPPQTVDHISQEHEGHLDPHTNDVDKSLQDDTEPENGSDISSAENEQTEADQ
ATAAETLSKNDILYDGENHDCEEKPQDIVQNIVEEMVNIVVGDMGEGTTINASADGNIGA
IEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQ
KDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINA
IKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTS
SFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGM
SNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQEMSEIKHPESIN
RYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYL
QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSA
LRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHS
PQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQN
VASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAF
SVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQ
KNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSL
TGTKDQAPDEFAGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAI
VDFVRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGC
NPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCI
AQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFEKHFPATIDSF
QDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVR
GWFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKL
PEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSG
TNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPTSGETAPLPPSPVSEK
PLDTISQKSVDIHDSIQPRSVDNRPQAPLVSASAVNEEISKIKSTAKFPEQKLFAALLIK
CVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLF
KLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMD
ESRISAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHA
SFYYPLLCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQELGINKQ
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggaagaagacgaagaacatgttcctgacccgggccctggagaagattttg
gccgacaaggaagtgaagaaggcgcatcactcccagctgcgcaaagcttgcgaggtagca
ttagaggaaataaaagcggaaactgaaaaacagagtcctcctcatggagaagcaaaagct
ggatcaagcacccttccaccagtgaaatcaaagacaaattttattgaagcagacaagtac
ttcttgccttttgagttggcatgccagtccaaatgcccccgcatagttagtacatctcta
gattgcttacagaaacttattgcttatgggcacttgactggcaatgctccagatagtaca
acaccaggcaaaaaattaattgatagaattattgaaacaatatgtggctgttttcaaggt
cctcagacagatgaaggagttcagctgcagataataaaggctttacttactgcagtaaca
tcacaacacatagaaattcacgaagggactgtactgcaagctgtgagaacatgttacaat
atctatttagcaagcaaaaatctcatcaatcagacaacagccaaagctactctcactcag
atgctaaatgttatctttgcacgcatggaaaaccaagcattacaggaagcaaaacaaatg
gaaaaagaaaggcatcggcagcatcatcatctgttacagtctccagtaagccatcatgag
cctgaatcacctcaacttagatatttgccacctcagactgttgatcatatatcccaagag
catgaaggtcaccttgatccccatacaaatgatgtagataaaagtcttcaggatgataca
gagcctgaaaatggatctgatatttccagtgcagaaaatgaacagactgaagctgatcag
gcaactgcagctgaaactttatctaaaaatgacatattatatgatggagaaaaccatgat
tgtgaggaaaagccacaagatattgtacagaacattgtagaagaaatggtgaacattgtt
gttggagatatgggagaagggactactataaatgcaagtgcagatggcaacattggagct
atagaagacggtagtgacagtgaaaatattcaagcaaatggaattccaggaacaccaatt
tctgttgcatatacaccatccttacctgatgatagattgtcagtctcttccaatgatact
caggaatctggaaattcttcaggaccttcacctggtgctaagttttcccacattttacaa
aaggatgcctttctagtattcaggtcattgtgtaaactgtcaatgaaaccactgtcagat
ggaccgccagatccaaagtctcatgaactacgatccaagattctttcattgcagttactt
ctatcaattctgcagaatgcgggacctgttttcaggacaaatgagatgtttattaatgct
attaagcagtatctttgcgttgcactctcaaaaaatggagtctcatctgttccagaggtt
tttgaactttctctttctatatttcttactttgttgtcaaatttcaagacacatctgaag
atgcaaattgaggtgttctttaaagaaattttcttatacattttggaaacttctaccagc
tcatttgatcacaagtggatggttattcagacactaacaagaatttgtgcagatgctcaa
agtgtagtggatatttatgtaaactatgactgtgacttaaatgcagccaatatatttgaa
agactggtaaatgatctatcaaaaattgctcaaggaagaggcagtcaagaacttggtatg
agtaatgttcaggaattgagcctgaggaaaaaaggtttagaatgcttagtgtcaattttg
aagtgtatggttgaatggagtaaggatcagtatgtgaatcccaactctcagacaactctt
ggtcaggaaaaaccctcagaacaagagatgagcgaaatcaaacaccctgagtcaataaac
agatatggaagtttaaattccctggagtcaacatcatcatcaggaataggcagctacagt
acacagatgtctggcactgataatccggaacaatttgaggtcctaaagcaacagaaagaa
ataatagaacaagggatagatttatttaataagaaaccaaagagaggaatacagtacctc
caagaacaagggatgcttggcaccacacctgaagatattgcgcaattcttacatcaagag
gaaagattagattctacccaagtgggtgagttcctgggagataatgataaatttaacaaa
gaagtcatgtatgcatatgtggaccaacatgacttttcaggaaaagactttgtttcagcc
cttcgtatgtttctggaaggatttcgtcttccaggggaagctcagaaaattgatcgatta
atggaaaaatttgctgcaagatacctagaatgcaaccaaggacaaaccctttttgctagt
gcggatactgcttatgttttggcttattcaattatcatgttgaccacagaccttcacagt
ccgcaggtgaaaaataaaatgacaaaggaacagtacattaaaatgaatagaggtatcaat
gacagtaaagaccttcctgaagagtatctatcagccatctataatgaaatagctgggaaa
aagatatcaatgaaagaaacaaaagaactaacaattcctacaaaatcaagtaaacaaaat
gtagccagtgaaaaacaaagaagacttctgtataacttagaaatggagcagatggccaag
acagctaaagcgctcatggaggccgtgagccatgttcaggcaccttttacaagtgcaaca
catttggagcatgtgaggcccatgtttaagttggcttggacaccttttctggctgcattc
agtgtcggtctacaagattgtgatgatactgaagtagcctctctttgcctggaaggtata
agatgtgcaatcagaattgcatgcattttcagcattcagctggaaagagatgcatatgtc
caggcactagcaagatttactttactcacagtgagttctggtattactgaaatgaaacag
aagaacattgacacaataaaaacacttatcacagtggctcatacagatggaaattattta
ggaaattcatggcatgagattctgaagtgcatcagtcagttggagctggcacagcttata
ggaactggagtgaaacctcgatacatttctggaacagtgcgaggcagagaaggatctctt
actggaacaaaagatcaggctcctgatgaatttgcaggtttaggactagttggaggaaat
gtggactggaaacagatagcaagtattcaggaatccattggagaaaccagttctcagagt
gttgttgttgctgtagatagaatattcacaggatctacaaggctagatggtaatgctatt
gtggattttgtccgttggctttgtgctgtgtctatggatgaattactttccacgacacac
ccaagaatgtttagtctgcaaaaaatagtagaaatatcatattacaacatgggaagaata
agattgcagtggtctcgaatttgggaagttattggagatcactttaataaggttgggtgt
aatcctaatgaagatgtagcgatttttgcagtagactccttgaggcagttgtcaatgaaa
ttcttagagaaaggggaacttgctaatttcagattccagaaggatttcttaagacctttt
gaacatataatgaaacggaacaggtctccaacaattcgagatatggttgtacggtgtata
gcacagatggttaattctcaagctgctaacattcgatctggatggaagaacattttctct
gtatttcatctagctgcatctgatcaagatgaaagtatagtggaacttgcattccaaaca
acagggcatattgtcacccttgtatttgaaaaacactttccagcaaccattgattctttc
caggatgcagtgaagtgtttgtctgaatttgcgtgcaatgcagctttcccagacacaagt
atggaagcaattcgacttattcgccattgtgcaaaatatgtgtctgatagacctcaggct
ttcaaggaatacacaagtgatgatatgaatgtggcacctgaagacagggtgtgggtgaga
ggatggttcccaattctctttgagttatcctgtatcatcaatagatgcaaattagatgta
agaaccaggggtttaacagtaatgtttgaaataatgaaaacatatggccacacttacgaa
aaacactggtggcaggatttatttagaattgttttcagaatctttgacaatatgaaattg
ccagaacaacagacagagaaagctgaatggatgacaacaacttgcaatcatgcactttat
gcaatctgtgatgtgttcactcagtatttagaagtactcagtgatgtacttttggatgat
atttttgctcagctctactggtgtgtgcagcaagacaatgagcagttagcacgatctggt
acaaattgtttagagaacgttgttattctgaatggtgaaaaatttaccctagaaatctgg
gataaaacttgcaactgcacactggatatcttcaaaaccacaatcccacatgcgctctta
acctggcgacccacttctggagaaactgcccccctacctccatctcctgtaagtgaaaag
ccattggatacaatatcacagaagtctgtagatattcatgattctattcagccaagatca
gtagataacagaccacaagcaccactggtttctgcctctgctgttaatgaagaaatcagc
aaaattaaatctacagcaaaatttccagaacaaaaattgtttgctgccctgttgattaaa
tgtgttgtgcagctggaactcatccagactatcgacaacattgtcttcttcccagccaca
agtaagaaggaagatgcggaaaacttagctgcagcccagagagacgcggtggactttgat
gttcgagttgatactcaagaccaaggaatgtaccggtttttaacatcacaacaacttttt
aagctactggactgcttattagagtcacatagatttgcaaaagcatttaattccaacaac
gaacagaggactgctctgtggaaggcaggattcaaaggcaaatccaagcccaaccttctg
aagcaggagaccagtagcctggcgtgtgggctgcgcattctcttccggatgtacatggat
gagagccgcattagtgcctgggaggaagtccagcagaggcttttgaatgtctgcagcgaa
gccctaagttacttccttactctaacatcagaaagtcatcgggaagcctggactaactta
ctgcttttgtttctaactaaagttctaaagataagtgataacaggtttaaagctcatgca
tcattctactaccctctcttatgtgaaattatgcaatttgacttgattcctgaacttcgt
gctgttcttagaagattttttctgcgaattggagtagtttttcagatatcacaaccacct
gaacaggaacttggaataaacaagcaatga
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integrated database retrieval system
