Callithrix jacchus (white-tufted-ear marmoset): 100395446
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Entry
100395446 CDS
T03264
Symbol
SOX12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100395446 (SOX12)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100395446 (SOX12)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100395446
NCBI-ProteinID:
XP_035154075
UniProt:
A0A2R8ML84
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Position
5:5989023..5992282
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AA seq
314 aa
AA seq
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MVQQRGARAKREGGPPPPGPGQAEEGAREPGWCKTPSGHIKRPMNAFMVWSQHERRKIMD
QWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPA
KARPRPPGGGGGGSRLKHGPQLAGRGGRRAAGGPLGGGAAAPEDDDEDDDEELLEVRLVE
TPGRELWRMVPAGRAARGQAERAQGPSGEGTAATAASPTLSEDEEPEEEEEEAAAAEEGE
EETVASGEEPLGFLSRMPPGPAGLDCSALDRDPDLPPPSGTSHFEFPDYCTPEVTEMIAG
DWRPSSIADLVFTY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcagcggggcgcgagggccaagcgggaaggcgggccgccgcccccgggaccc
gggcaggccgaggagggggcgcgcgagcccggctggtgcaagaccccgagcggccacatc
aagaggccgatgaacgcgttcatggtgtggtcgcagcacgaacggcggaagatcatggac
cagtggcccgacatgcacaacgccgagatctccaagcgcctgggccgccgctggcagctg
ctgcaggactcggagaagatcccgttcgtgcgggaggcggagcggctgcgcctcaagcac
atggcggattacccggactacaagtaccggccgcgcaaaaagagcaagggggcgcccgcc
aaggcgcggccccgcccccccggtggcggcggtggcggcagccggctcaagcacgggccg
cagctggccggccgcgggggccgccgagcggctggagggcctttggggggcggggcggca
gcgcccgaggacgacgatgaagacgacgacgaggagctgctggaagtgcgcctggtggag
accccggggcgcgagctgtggaggatggtcccggcgggacgggccgcccggggacaagcg
gagcgcgcccaagggccgtcgggcgaggggacggccgccaccgccgcttccccgacactg
tcggaggatgaggagccggaggaagaggaggaggaggcggcagcggctgaggaaggcgaa
gaggagacggtggcgtcgggggaggagccgctaggctttctgtccaggatgccccctggc
ccggccggcctagactgcagcgccctggatcgcgacccggacctgccgcctccctcgggc
acgtcgcacttcgagttcccggactactgcacccccgaggttactgagatgatcgcgggg
gactggcgcccgtctagcatcgccgacctggttttcacctactga
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