Callithrix jacchus (white-tufted-ear marmoset): 100395720
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Entry
100395720 CDS
T03264
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04068
FoxO signaling pathway
cjc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100395720 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
100395720 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100395720 (RAG1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100395720 (RAG1)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100395720 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100395720
NCBI-ProteinID:
XP_009006192
Ensembl:
ENSCJAG00000011082
LinkDB
All DBs
Position
11:98665166..98676866
Genome browser
AA seq
1043 aa
AA seq
DB search
MAASFPPTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKTPEEAQKEKKDSSEGKSSLE
QSPAVLDKADGQKPVQTHPMLKPHPKFSKKFHDDGKARGKAIHQANLRYLCRICGNSFKT
DEHNRRYPVHGPVDGKTLGLLRKKEKRATSWPDLIAKVFRINVKADVDLIHPTEFCHNCW
SVMHRKFSSALGEVYFPRKATVEWHPHTPSCDICNTVRQGLKRKSLQPNLQLSKKLKTVL
NHARQARQRKRRAQARISSKDIMKKTANCSKIHLSTKLLAVDFPEHFVKSISCQICEHIL
ADPVETSCKHVFCRVCIIRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPA
QECNEVVSLEKYNHHISSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCMTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHHFEWQPPLKNVSSRTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMKSQDLEDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTIMKITIAHNSQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSELMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKTSGFTMN
SQASLGDPSGIEDSLESQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctttcccacctaccttgggactcagttctgccccagatgaaattcaacat
ccacatattaaattttcagaatggaaatttaagctattccgggtaagatcctttgaaaag
acacctgaagaagctcaaaaggaaaagaaggattcctctgaggggaaatcctctctagag
caatctccagcagtcctggacaaggctgatggtcagaagccagtccaaactcatccaatg
ttaaaaccccaccctaagttttccaagaaatttcacgatgatgggaaagcaagaggcaaa
gcaatccaccaagccaaccttcgatatctctgccgtatctgtgggaattcttttaaaact
gatgaacacaacaggagatacccagtccatgggcctgtggatggtaaaaccctaggcctt
ttaagaaaaaaggaaaagagagctacttcctggccagacctcattgccaaggttttccgg
atcaatgtgaaggcagatgttgacttgatccatcccactgagttctgccataattgttgg
agcgtcatgcacaggaagttcagcagtgccctgggtgaagtttacttcccgaggaaagcg
actgtggagtggcacccccacacaccatcctgtgatatctgcaacactgtccgtcaggga
ctcaagaggaagagtcttcagccaaacttgcagctcagcaaaaaactcaaaactgtgctt
aaccacgcaagacaagcccgtcagcgcaagagaagagctcaggcaaggatcagcagcaag
gatattatgaagaagactgccaattgcagtaagatacatcttagtaccaagctccttgca
gtggacttcccggagcactttgtgaaatccatttcctgccagatatgtgaacacattctg
gctgaccctgtggagaccagctgtaagcatgtcttttgcagggtctgcattatcagatgc
ctcaaagtcatgggcagctattgtccctcttgccgatatccgtgcttccctactgacctg
gagagtccagtgaagtcctttctgagcatcttgaattccctgatggtgaaatgtccagca
caagagtgcaatgaagtggtcagtttggaaaaatataatcaccacatctcaagtcacaag
gaatcaaaagagacttttgtgcacattaataaagggggccggccccgccaacatcttctg
tcactgactcgcagagctcagaagcaccggctaagggagctcaagctgcaagtcaaagcc
tttgctgacaaagaagaaggtggagatgtgaagtccgtgtgcatgaccttattcctgctg
gctctgagggcaagaaatgaacacaggcaagccgatgagctggaggccatcatgcagggt
cggggctctggcctgcagccagctgtttgcttggccatccgtgtcaataccttcctcagc
tgcagtcagtaccacaagatgtacaggaccgtgaaagccattacagggagacagattttt
cagcctttgcatgcccttcggaatgctgagaaggtccttctgccaggctaccaccacttt
gagtggcagccacctctgaagaatgtgtcttcccgcactgatgttggcattattgatggg
ctgtctggactatcgtcctctgtggacgattacccagtggacaccattgcaaagagattt
cgctacgattcagctttggtgtctgctttgatggacatggaagaagacatcttggaaggc
atgaaatcccaagatcttgaggattacttgaatggccccttcactgtggttgtgaaggag
tcttgtgacggaatgggagatgtgagtgagaagcatgggagtgggccagtagtcccggaa
aaggcagtccgtttttcattcacaatcatgaaaattactatagcccacaactctcagaac
gtgaaagtgtttgaagaagccaaacctaactctgaactgtgttgcaagccattgtgcctt
atgctggcagatgagtctgaccacgagaccctgactgccatcctgagtcctctcattgcc
gagagggaggccatgaagagcagtgaattaatgcttgagatgggaggcattctccggact
ttcaagttcatcttcaggggcactggatatgatgaaaaacttgtgcgggaagtggaaggc
cttgaggcttctggttcagtctacatctgtactctttgtgatgccacccgtctggaagcc
tctcaaaatcttgtcttccactctataaccagaagccatgccgagaacctggaacgttat
gaggtctggcgttccaacccttaccacgagtctgtggaagaactacgggatcgggtgaaa
ggggtctcagccaaacctttcattgagacagtcccttccatagatgcactccactgtgac
attggcaatgcggctgagttctataagatcttccagctagagataggggaggtgtataag
aatcccaatgcttccaaagaggaaaggaaaaggtggcaggccacattggacaagcatctc
cggaagaagatgaacctcaaaccaatcatgaggatgaatggcaactttgccaggaagctc
atgactaaagagactgtagatgcagtttgtgagttaattccttctgaggagaggcacgag
gctctgagggagctgatggatctttacctgaagatgaaaccagtatggcggtcatcatgc
cctgctaaagagtgcccagaatctctctgccagtacagtttcaattcacagcgttttgct
gagctcctttctaccaagttcaagtataggtatgaggggaaaatcaccaattattttcac
aaaaccctggcacatgttcctgaaattattgagagggatggctccattggggcatgggca
agtgagggaaatgagtctggtaacaaactgtttaggcgcttccggaaaatgaatgccagg
cagtccaaatgctatgagatggaagacgttctgaaacaccactggctgtacacctccaaa
tacctccagaagtttatgaatgctcataacgcattaaaaacctctgggtttaccatgaac
tctcaggcaagtttaggggacccatcaggcatagaggactctctggaaagccaagattca
atggaattttaa
DBGET
integrated database retrieval system
