Callithrix jacchus (white-tufted-ear marmoset): 100395747
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Entry
100395747 CDS
T03264
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X2
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04517
IgSF CAM signaling
cjc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100395747 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100395747 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjc04812
]
100395747 (SPTBN1)
Cytoskeleton proteins [BR:
cjc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100395747 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
100395747 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
100395747
NCBI-ProteinID:
XP_002757793
Ensembl:
ENSCJAG00000010149
UniProt:
U3CSG0
LinkDB
All DBs
Position
14
Genome browser
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLVLSQDYGKHLLGVEDLLQKHTLVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTLDTLHEQANALPQEHAESPDVRGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEGDACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSSHPSEKKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
RETASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIQKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEEAESQQQWDTSKGEQVSQNGLPAEQGSPRMADTVDTSEMVNGATEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccagcagcagtacagtgat
gtcaacaaccgctgggacgtcgatgactgggacaatgagaacagctctgcgaggctcttt
gagcggtcccgcatcaaggctctggcagatgagcgtgaagccgtgcagaagaagaccttc
accaagtgggtcaattcccaccttgcccgagtatcttgccggatcacagacctgtacacc
gatcttcgagatggacggatgctcatcaagctgctggaggtcctctctggagagaggctg
cctaaacccaccaagggacgaatgcgcatccactgcctagagaatgtggacaaggccctt
cagttcctgaaggagcagagagtccatctcgagaacatggggtcccatgatatcgtggat
ggaaaccaccggctgacccttggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtggaaactgaagacaacaaagagaagaaatctgccaaggatgcgttgctg
ttgtggtgccagatgaagacagctgggtaccccaatgtcaacattcacaatttcaccact
agctggagggacggcatggccttcaatgcactgatacacaaacaccggcctgacctaata
gattttgacaaactaaagaaatccaatgcacactacaacctgcagaatgcatttaatctg
gcagagcagcaccttggcctcactaaactgttggatcctgaagacatcagcgtggaccac
cctgatgagaagtccataatcacttacgtggtaacttattaccattacttctctaagatg
aaggctttggctgttgaaggaaaacgaattggaaaggtccttgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctctgaccttctggaatggattgaacaa
accatcatcattctgaacaatcgcaaatttgccaattcactggtcggggttcaacagcag
cttcaggcattcaacacttaccgcactgtggagaaaccacccaaatttactgagaagggg
aacttggaagtgctgctcttcaccattcagagcaagatgagagccaacaaccagaaggtc
tacatgccccgggaggggaagctcatctctgacatcaacaaggcctgggaaagactggaa
aaagctgaacacgaaagagaactggctttgcggaatgagctcataagacaggagaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacttggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggatttgaccttcccgcagttgaggccgcc
accaaaaagcatgaggccattgagacagacattgccgcatacgaggagcgtgtgcaggct
gtggtagcagtggccagggagcttgaggctgagaattaccatgacatcaagcgcatcaca
gcgaggaaggacaatgtcatccggctctgggaatatctactggaactgctcagggcccgg
agacagcggctcgagatgaacctggggctgcagaagatattccaggaaatgctctacatt
atggactggatggacgaaatgaaggtgctagtattatctcaagactatggcaaacactta
cttggtgtggaagacctgttacagaagcacaccctggttgaagcagacattggcatccaa
gcagagcgggtgagaggtgtcaatgcctccgcccagaagttcgcaacagatggggaaggt
tacaagccctgcgacccccaggtaatccgagaccgcgtggcccacatggagttctgttat
caagagctttgccagctggcggctgagcgcagggcccgtctggaagagtcccgccgcctc
tggaagttcttctgggagatggcagaagaggaaggctggataagggaaaaggagaagatt
ctatcctctgatgattatgggaaagacctgaccagtgtcatgcgcctgctcagcaagcac
cgggcatttgaggacgagatgagtggccgcagtggccactttgagcaggccatcaaggaa
ggcgaagacatgatcgcagaggagcactttgggtcggagaagatccgtgagaggatcatt
tacatccgggagcagtgggccaacctggagcaactctcggccattcggaagaagcgcctg
gaggaggcctccctgctgcaccagttccaggcagatgctgatgacattgacgcctggatg
ctggatatcctcaagattgtctccagcagcgacgtgggccatgacgagtattccacacag
tctctggtcaagaaacacaaggacgtggcggaagagatcgccaattacaggcccaccctt
gacacgctgcatgagcaagccaacgccctcccccaggagcatgccgagtctccagacgtg
aggggcaggctgtcgggcatcgaggagcggtataaggaggtggcagagctgacgcggctg
cgtaagcaggcgctccaggacaccctggccctgtacaagatgttcagcgagggtgatgcc
tgtgagctctggatcgatgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcacagatttgagagcctagaaccagaaatgaacaac
caggcttcccgggttgcagtggtgaaccagattgcacgccagctgatgcacagcagccac
ccaagtgagaagaaaatcaaagcccagcaggacaaactcaacacgaggtggagccagttc
agagaactggttgacaggaagaaggatgccctcctgtctgccctgagcatccagaactac
cacctcgagtgcaacgaaactaaatcctggattcgggaaaagaccaaggtcatcgagtcc
acccaggacctgggcaatgacctggccggagtcatggccctgcagcgcaagctgaccggc
atggagagggacttggtggccattgaggcaaagctaagtgacctgcagaaggaggcggag
aagctggagtccgagcaccccgaccaggcccaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccaccctgaaaaaccgagaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggacttggacgacttccaatcctggctctccagg
acccagacagcaatcgcctcagaagacatgcccaacacactgactgaggctgagaagctg
cttacacagcacgagaacatcaagaacgagattgacaactatgaggaggactatcagaag
atgagggacatgggcgagatggtcacccaggggcagactgacgcccagtacatgtttcta
cggcagcggctgcaggccctggacactggatggaatgagctccacaagatgtgggagaac
agacaaaatctcctctcccagtcacacgcctaccagcagttcctcagagacacgaagcaa
gcggaagcctttcttaacaaccaggagtatgttctggctcacactgaaatgcctaccacc
ttggaaggagctgaagcagcaattaaaaagcaagaggacttcatgaccaccatggacgcc
aatgaggagaagatcaacgctgtggtggagactggccggagactggtgagcgatgggaac
atcaactcagatcgcatccaggagaaggtggactctattgacgacagacataggaagaat
cgtgagacagccagtgaacttttgatgaggttgaaggacaacagggatctacagaaattc
ctgcaagattgtcaagagctatcgctctggatcaatgagaagatgcttacagcccaggac
atgtcttacgatgaagccagaaatctgcacagtaaatggttgaaacatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaatccagaaggaaggaatgcagctc
atttcagaaaagcctgagacagaagctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccactacccagaccaaggctcagcggctctttgatgcaaac
aaggctgaacttttcacccagagctgtgcagatctagacaaatggctgcacggcctggag
agtcagattcaatctgatgactacggcaaagacctgaccagcgtcaatatcctgctgaaa
aagcaacagatgctggagaatcagatggaagtgcggaagaaggagatcgaagagctccaa
agccaagcccaggccctgagtcaggaagggaagagcaccgacgaggtggacagcaagcgc
ctcactgtgcagaccaagttcatggagttgctggaacccttgaacgagaggaagcataac
ctgctggcttccaaagagatccaccagttcaacagggatgtggaggacgagatcttgtgg
gttggagagaggatgcctttggcaacttccacggatcatggccacaacctccagactgtg
cagctgttaataaagaaaaaccagaccctccagaaagaaatccaggggcaccagcctcgc
attgacgacatctttgagaggagccaaaacatcgtcacagacagcagcagcctcaacgct
gaggccatcagacagaggcttgccgatctgaagcagctgtggggtctcctcattgaggag
acggagaaacgccaccggcggctggaggaggcacacagggcccagcagtactactttgat
gctgccgaggccgaagcctggatgagtgagcaggagctgtacatgatgtcagaggaaaag
gccaaggatgagcagagcgctgtctccatgttgaagaagcaccagatcttagaacaagct
gtggaggactatgcagagactgtgcatcagctctccaagaccagccgggccctggtggct
gacagccatcctgaaagtgaacgcattagcatgcggcagtccaaagtggataaactgtac
gctggtctgaaagaccttgctgaagagaggagaggcaagctagatgagagacacaggtta
ttccagctcaaccgggaagtagacgacctggaacagtggatcgctgagagggaggtggtc
gcagggtcccatgaactgggacaggactatgagcatgtcacgatgttacaagaacgattc
cgggaatttgcccgagatactgggaacattgggcaggagcgcgtggacacggtcaatcac
atggcagatgaactcattaactctggacattcggatgccgccaccatcgctgaatggaag
gatggtctcaacgaagcctgggccgacctcctggagctcattgacacaagaacacagatc
cttgccgcttcctatgaactgcacaagttttaccatgatgccaaggagatctttgggcgt
atacaggacaaacacaagaaactccctgaggagcttgggagagatcagaacacagtggag
accttacagagaatgcacactacatttgagcatgacatccaggctctgggcacacaggtg
aggcagctgcaggaggatgcagcccgcctccaggcagcctatgcaggtgacaaggctgac
gacatacagaagcgcgagaacgaggtcttggaagcctggaagtccctgttggacgcctgt
gagagccgcagggtgaggctggtggacacgggggacaagttccgcttcttcagcatggta
cgcgacctcatgctctggatggaggatgtcatccggcagatcgaggcccaggagaagcca
agggatgtatcatctgttgaactcttaatgaataatcatcaaggcatcaaagctgaaatt
gatgcacgtaatgacagtttcacaacctgcattgaacttgggaaatccttgttggcgaga
aaacactatgcatctgaggagatcaaggaaaagttactgcagttgacagaaaagaggaaa
gaaatgatcgacaagtgggaagaccgatgggaatggttaagattgattttggaggtccat
cagttctcaagagacgccagtgtggctgaggcctggctgcttggacaggagccgtaccta
tccagccgagagataggccagagcgtggacgaggtggagaagctcatcaagcgccatgag
gcatttgaaaagtctgcagcaacctgggatgagaggttctccgccctggaaaggctgact
acattggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccg
ccttctcccgagccgagcacgaaggtttcagaggaagccgagtcccagcagcagtgggat
acttcaaaaggagaacaagtttcccaaaacggtttgccggctgaacagggatctccacgg
atggcagatacggtggacacaagtgaaatggtcaatggcgctacagaacagaggacaagc
tctaaagagtccagccccatcccctccccgacctctgatcggaaagccaagactgccctc
ccagcccagagtgccgccaccttaccagccagaacccaggagacgccttcggcccagatg
gaaggcttcctcaatcggaaacacgagtgggaggcccacaataagaaagcctcaagcagg
tcctggcacaatgtttattgtgtcataaataaccaagaaatgggtttctacaaagatgca
aagactgctgcttctggaattccctaccacagcgaggtccctgtaagtttgaaagaagct
gtctgcgaagtggcccttgattataaaaagaagaaacacgtattcaagctaagactaaat
gatggcaatgagtacctcttccaagccaaagacgatgaggaaatgaatacatggatccag
gccatctcttccgccatctcctctgataaacatgaggtgtccgccagcacccagagcacg
ccagcatccagccgggcgcagaccctccccaccagcgtcgtcaccatcaccagcgagtcc
agtcccggcaagcgggagaaggacaaagagaaagacaaagagaagcggttcagccttttt
ggcaaaaagaaatga
DBGET
integrated database retrieval system
