Callithrix jacchus (white-tufted-ear marmoset): 100395776
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Entry
100395776 CDS
T03264
Symbol
TNN
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04151
PI3K-Akt signaling pathway
cjc04510
Focal adhesion
cjc04512
ECM-receptor interaction
cjc04518
Integrin signaling
cjc05165
Human papillomavirus infection
cjc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100395776 (TNN)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100395776 (TNN)
04518 Integrin signaling
100395776 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100395776 (TNN)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100395776 (TNN)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100395776 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cjc00536
]
100395776 (TNN)
Glycosaminoglycan binding proteins [BR:
cjc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100395776 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Fn3_VIN3
DUF4998
EGF_2
EGF_Tenascin
DUF7949
Uroplakin_II
Motif
Other DBs
NCBI-GeneID:
100395776
NCBI-ProteinID:
XP_035135484
Ensembl:
ENSCJAG00000008930
UniProt:
F6YNG1
LinkDB
All DBs
Position
18:complement(21554870..21622934)
Genome browser
AA seq
1299 aa
AA seq
DB search
MSLQEMFCFPLGLLLGSVLLVASAPATLELPGCSNKEQQVTVSHTYKIDVPKSALVQMEA
DPQPLSDDGTSLLALGEAREEQNIIFRHNIRLQTPQKDCELATSVQDLLARVKKLEEEMM
EMKKQCSAQRCCQGATDLRHHCSGHGTFSLETCSCHCQEGWEGTTCEQQACPGACSGHGR
CVDGHCLCHEPYVGADCGYPPCPENCSGHGECVRGVCQCHEDFTSEDCSERRCPGDCSGH
GFCDTGECYCEEGFAGLDCAQVVVPQGLQLLKSTEDSLLVSWEPSSQVDHYLLSYYPLGK
EISGKQIQVPKEQHSYEILNLLPGTKYVVTLRNVKKEVSSSPQHLLATTDHAVLGTAWVT
DETENSLDVEWENPSTEVDYYKLRYGPMTGQEVAEVTVPKSSDPKSRYDITGLHPGTEYK
ITVVPMRGELEGKPILLNGRTEIDSPTNVITDRVTENTATVSWDPVQAVIDKYVVRYTSA
DGDTEEMAVHKDESSTVLTGLKPGEAYKVYVWAERGNQGSKKADTNALTEIDSPANLVTD
RVTEHTATISWDPVQATIDKYVVSYASADDQETREVPVGKEQSSTVLTGLRPGVEYMVHV
WAQKGDRESKRADTKAPTDIDSPKNLVTDRVTENMATVSWDPVQAAIDKYVVRYTSADGE
TREVPVGKEQSSTVLMGLRPGVEYTVHVWAQKGDQESKKADTKAQTDIDSPQNLVTDRVT
ENMAIVSWDPVQATIDRYVVRYTSAEDGETREVPVEKEERSTVLTGLRPGVEYTVHVWAE
KGAQESKKADTKAQTDIDSPKNLVTDEVTENMATVSWDPVQAAIDKYMVRYTSADGETRE
VPVGKEQSSTVLMGLRPGVEYTVHVWAQKGDQESKKADTKAQTEMDSPKNLMIDQVTENM
ATVSWDPVQAPIDKYVVRYASADGETREVPVGKEQSSTVLMGLRPGVEYTVHVWAQKGDR
ESKKADTKAQTELDPPRNLRPSAVTQSAGILTWTPPSAQIHGYILTYQFPDGTVKEMQLG
REDQRFELQGLEQGATYPVSLVAFKGDRRSRNVSTTLSTVGARFPHPSDCSQVRQNNNAA
SGLYTIYLHGDASRPLQVYCDMDTDGGGWTVFQRRNTGQLDFFKRWRSYVEGFGDPRKEF
WLGLDNLHNLTTGTPTRYEVRVDLQTANESAYAIYDFFQVASSKERYKLTVGKYRGTAGD
ALSYHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGRYGETKHSEGVNWEPW
KGHEFSIPYVELKIRPRGYSSEPVLGRKKRTLGGMLRTF
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccaggagatgttctgcttccccttggggctcctgcttggctctgtgctcttg
gtggcttctgccccggccactctggagcttcccggctgcagcaacaaggaacaacaggtc
actgtcagccacacctacaagatcgatgtgcctaagtctgccctggttcagatggaggct
gaccctcagcccctcagtgacgatgggacttcgctcttggccctgggggaggccagggag
gaacagaacatcatcttcagacacaacatccgccttcagacgccacagaaggactgtgaa
ttggcaaccagtgtccaggacctcctggcccgtgtgaagaagctggaggaagagatgatg
gagatgaagaagcagtgtagtgcccagcgctgctgccagggagctactgatctgaggcac
cactgcagcggccatgggaccttctccctggagacctgcagttgccactgccaggagggc
tgggagggcaccacctgtgagcagcaggcctgccccggggcatgcagcggccacgggcgc
tgcgtggacgggcactgcctgtgccacgagccctacgtgggcgccgactgcggctatcct
ccctgccctgagaactgcagcgggcacggcgagtgcgtgcgcggcgtatgccagtgccac
gaggacttcacgtcggaggactgcagcgagcggcgctgtcccggcgactgcagcggccac
ggcttctgcgacacgggcgagtgctactgcgaggagggctttgcaggcctggactgtgcc
caggtggtcgtcccacagggcctgcagctgctcaagagcacggaggattccctgttggtg
agctgggagccctccagccaggtggaccactacctcctcagctactaccccctggggaag
gagatctctgggaagcagatccaggtgcccaaggagcagcacagctacgagattctcaat
ttgctgcctggaaccaagtacgtagtcaccctgcgtaacgtcaagaaagaagtttctagc
agcccacagcatctacttgccaccacagaccatgctgtgcttggcactgcctgggtgaca
gatgagactgaaaactccctcgacgtggaatgggaaaacccctcgaccgaggtggactac
tacaagctgcgatacgggcccatgacggggcaggaggtagctgaggtcactgtgcccaag
agcagcgaccccaagagtcgatatgacatcactggtctgcacccggggacggagtataag
atcacggtggtgcccatgcgaggagaactggagggcaagcccattctcctgaatggcaga
acagaaattgacagtccaaccaatgtcatcaccgatcgagtgactgaaaacacagcaacg
gtctcctgggacccagtgcaggctgtcatagacaagtatgtagtgcgctacacttctgct
gatggggacaccgaggaaatggcagtgcacaaggacgagagcagcactgtcctgacaggc
ctgaagccaggagaggcatacaaggtctacgtgtgggctgaaaggggcaaccaggggagc
aagaaagctgacaccaatgccctcacagaaattgacagcccagcaaacctggtgaccgat
cgggtgacagagcatactgccaccatctcctgggacccagtgcaggccaccattgacaag
tacgtggtgagctacgcctctgctgatgaccaggagaccagagaggttccggtggggaag
gagcagagcagcaccgtcctgacaggcctgaggccaggcgtggagtacatggtacacgtg
tgggcccagaagggggaccgagagagcaagagggccgacaccaaggccccgacagacatt
gacagccccaaaaacctcgtgactgaccgggtgacagagaatatggccactgtctcctgg
gacccggtgcaggccgccattgacaagtacgtggtgcgctacacctctgctgacggagag
accagggaggttccggtggggaaggagcagagcagcactgtcctgatgggcctgaggccg
ggcgtggagtacacggtgcacgtgtgggcccagaagggggaccaggagagcaagaaggcc
gacaccaaggcccagacagacattgacagcccccaaaacctggtgaccgaccgggtgaca
gagaatatggccattgtctcctgggacccggtgcaggccaccattgacaggtatgtggta
cgctacacctctgctgaggacggagagaccagggaggttccagtggagaaggaggagagg
agcactgtcctgacgggtctgagaccaggcgtggagtacacagtgcacgtgtgggccgag
aagggggcccaggagagcaagaaggccgacaccaaggcccagacagacattgacagcccc
aaaaacctggtcactgacgaggtgacagagaatatggccactgtctcctgggacccggtg
caggctgccattgacaagtacatggtgcgctacacctctgctgacggagagaccagggag
gttcctgtggggaaggagcagagcagcactgttctgatgggcctgaggccgggcgtggag
tacacagtgcacgtgtgggcccagaagggggaccaggagagcaagaaggccgacaccaag
gcccagacagaaatggacagccctaaaaacctgatgattgaccaggtgacagagaatatg
gccactgtctcctgggacccggtgcaggcccccattgacaagtacgtggtgcgctacgcc
tctgctgacggagagaccagggaggttccggtggggaaggagcagagcagcaccgtcctg
atgggcctgaggccgggcgtggagtacacggtgcacgtgtgggcccagaagggggaccga
gagagcaagaaggccgacaccaaggcccagacagaactcgaccctcccagaaatcttcgt
ccatctgctgtgacgcagtctgctggcatattgacctggacacccccctctgctcagatt
catggctacattctgacctaccagttcccagacggcacggttaaggagatgcagctggga
cgagaagaccagaggtttgagttgcaaggccttgagcagggcgctacctaccctgtctcc
ctggttgcctttaagggtgatcgccggagcaggaatgtatccaccaccctctccacagtt
ggtgctcgtttcccacacccttcggactgcagtcaggttcggcagaataacaatgctgcc
agtggtctgtacaccatctacctgcacggcgatgccagccggcccctgcaggtgtactgc
gacatggacacggacggaggtggctggactgtcttccagaggcggaacactgggcagttg
gatttcttcaagcgatggaggagctatgtggaaggctttggggaccccaggaaggagttc
tggcttggacttgacaatctacacaacctcaccactggcaccccaacacggtatgaggtg
agagtggatttacagactgccaatgaatctgcctatgctatatatgattttttccaagtg
gcctccagcaaggagcggtataagctgacagttgggaaatacagaggcacagcgggggat
gctcttagttaccacaatggatggaagtttacaacttttgacagagacaacgatatcgca
cttagcaactgtgccctgacacatcatggaggctggtggtataagaactgccacttggcc
aaccccaatggcagatatggggagaccaagcacagtgagggggtgaactgggagccgtgg
aaaggacatgaattctccatcccttacgtggaattgaaaatccgccctcgtggctacagc
agcgagcctgtcctgggcagaaagaagaggacgctgggaggaatgctgcgaacgttctga
DBGET
integrated database retrieval system
