Callithrix jacchus (white-tufted-ear marmoset): 100396004
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Entry
100396004 CDS
T03264
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X2
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01524
Platinum drug resistance
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100396004 (TOP2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjc03032
]
100396004 (TOP2B)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100396004 (TOP2B)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
100396004 (TOP2B)
DNA replication proteins [BR:
cjc03032
]
Eukaryotic type
DNA Topoisomerases
100396004 (TOP2B)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
100396004 (TOP2B)
Centrosome formation proteins
Centriole proteins
100396004 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
DUF7180
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
100396004
NCBI-ProteinID:
XP_002759705
Ensembl:
ENSCJAG00000003963
UniProt:
U3BD56
LinkDB
All DBs
Position
17:complement(57096675..57165438)
Genome browser
AA seq
1620 aa
AA seq
DB search
MAKSGGCGAGAGVGGGNGALTWVNNAAKKEESETANKNDSSKKLSVERVYQKKTQLEHIL
LRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTC
IKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNG
YGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKIKHFDGEDYTCITFQPDLS
KFKMEKLDKDIVALMTKRAYDLAGSCKGVKVMFNGKKLPVNGFRSYVDLYVKDKLDETGV
ALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKK
NKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFKAASN
CGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDS
AKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDD
AESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNK
QELSFYSIPEFDEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPE
DDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELI
LFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQAL
MMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDN
LLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLD
PHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPML
NGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFD
HMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKIT
IENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDTQNQHDDSSSDSGTPSGPDFNY
ILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAFVEELDKVEAQERE
DILAGMSGKAIKGKVGKPKVKKLQLEETMPSPYGRRIIPEITAMKADASKKLLKKKKGDL
DTAAVKVEFDEEFSGVPVEGAGEEALTPSMPINKGPKPKREKKEPGTRVRKTPTSSGKPT
AKKVKKRNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDFSEEEDDDADDD
DDNNDLEELKVKASPITNDGEDEFVPSDGLDKDEYTFSPGKSKATPEKSLHDKKSQDFGN
LFSFPSYSQKSEDDSAKFDSNEEDTASVFSPSFGLKQTDKVPSKTVAAKKGKPSSDTAPK
PKRAPKQKKIVETVNSDSDSEFGIPKKTTTPKGKGRGAKKRKASGSENEGDYNPGRKTSK
TTSKKPKKTSFDQDSDVDIFPSDFPSEPPSLPRTGRARKEVKYFAESDEEEDDVDFAMFN
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtcgggtggctgcggcgcgggagccggcgtgggcggcggcaacggggcactg
acttgggtgaacaatgctgcaaaaaaagaagagtcagaaactgccaacaaaaatgattct
tcaaagaagttgtctgttgagagagtatatcagaagaagacacaacttgaacacattctt
cttcgtcctgatacatatattggatcagtggagccattgacacagttaatgtgggtgtat
gatgaagatgtgggaatgaattgcagagaggttacctttgtgccaggtttatataagatc
tttgatgaaattttggttaatgctgctgacaataaacagagggataagaacatgacttgt
attaaagtttctattgatcctgaatctaacattataagcatttggaataatgggaaaggc
attccagtagtagaacacaaggtagagaaagtttatgttcctgctttaatttttggacag
cttttaacatccagtaactatgatgatgatgaaaaaaaagttacaggtggtcgtaatggt
tatggtgcaaaactttgtaatattttcagtacaaagtttacagtagaaacagcttgcaaa
gaatataaacacagttttaagcagacatggatgaataatatgatgaagacttctgaagcc
aaaattaaacattttgatggtgaagattacacatgcataacattccaaccagatctgtcc
aaatttaagatggaaaaacttgacaaggatattgtggccctcatgaccaagagggcatat
gatttggctggttcatgtaaaggggtcaaggtcatgtttaatggaaagaaattgcctgta
aatggatttcgcagttatgtagatctttatgtaaaagacaaattggatgaaactggggtg
gccctgaaagttattcatgaacttgcaaatgaaagatgggatgtttgtctcacattgagt
gaaaaaggattccagcaaatcagctttgtaaatagtattgcaactacaaaaggtggacgg
cacgtggattatgtggtagatcaagttgttggtaaactgattgaagtagttaagaaaaag
aacaaagctggtgtatcagtgaaaccatttcaagtaaaaaaccatatatgggtttttatt
aattgccttattgaaaatccaacttttgattctcagactaaggaaaacatgactctgcag
cccaaaagttttgggtctaaatgccagctttcagaaaaattttttaaagcagcctctaat
tgtggcattgtagaaagtatcctgaactgggtgaaatttaaggctcagactcagctgaat
aagaaatgttcatcagtaaaatacagtaaaatcaaaggtattcccaaactggatgatgct
aatgatgctggtggcaaacattccctggagtgtacacttatattaactgagggagactcc
gccaaatcactggctgtgtctggattaggtgtgattggccgagacagatatggagttttt
ccactcaggggcaaaattcttaatgtacgggaagcttctcataaacagatcatggaaaat
gcagaaataaataatattattaaaatagttggtctacaatataagaaaagttacgatgat
gcagaatctctgaaaacgttacgctatgggaagattatgattatgactgatcaggatcaa
gatggttctcacataaaaggcctgcttattaatttcatccatcacaattggccatcactt
ctgaagcatggttttctcgaagagttcattactcctattgtaaaggcaagcaaaaataag
caggaactttccttctatagtattcctgaatttgatgagtggaaaaaacacatagaaaat
cagaaagcctggaaaataaagtactataaaggattgggtactagtacagctaaagaagca
aaggaatattttgctgatatggaaaggcatcgaatcttgtttagatacgctggtcctgaa
gatgatgctgccattacattggcattcagtaagaagaagattgatgacagaaaagaatgg
ttaacaaattttatggaagaccggagacagcgtaggttacatggcttaccagagcaattt
ttatatggtactgcaacaaagcatttgacttacaatgatttcatcaacaaggaattgatt
ctcttctcaaactcagacaatgaaagatctataccatctcttgttgatggctttaaacct
ggccaacggaaagttttatttacctgtttcaagaggaatgataaacgtgaagtgaaagtt
gcccagttggctggatctgttgctgagatgtctgcttatcatcatggagaacaagcattg
atgatgactattgtgaatttggctcagaactttgtgggaagtaacaatattaacttactt
cagcctattggtcaatttggaactcggcttcatggtggcaaagatgctgcaagccctcgt
tatattttcacaatgttaagctctttagcaagactactttttcctgctgtggatgacaac
ctgcttaagtttctttatgatgataatcaacgtgtagagcctgagtggtatattcctata
attcccatggttttaataaatggtgctgagggcattggtactggatgggcttgtaaacta
cccaactatgatgctagggaaattgtgaacaatgtcagacgaatgctagatggcttggat
cctcatcccatgcttccaaactacaaaaactttaaaggcacaatccaagaacttggtcaa
aaccagtatgcggtcagtggtgaaatatttgtagtggacagaaacacagtagaaattaca
gagcttccggttagaacttggacacaggtatataaagaacaggttttagaacctatgcta
aatggaacagataaaacaccagcattaatttctgattataaagaatatcatactgacaca
actgtgaaatttgtggtgaaaatgactgaagagaaactagcacaagcagaagctgctgga
ttgcataaagtttttaaacttcaaactactcttacctgtaattccatggtactctttgat
catatgggatgtctgaagaaatatgaaactgtgcaagacattctgaaagaattctttgat
ttacgattaagttattatggtttacgtaaggagtggcttgtgggaatgttgggagcagaa
tctacaaagcttaacaatcaagcccgtttcattttagagaagatacaagggaaaattact
atagagaataggtcaaagaaagatttgattcaaatgttagtccagagaggttatgaatct
gacccagtgaaagcctggaaagaagcacaagaaaaggcagcagaagaggaagacacacaa
aaccaacatgatgatagttcctccgattcaggaactccttcaggcccagattttaattat
attttaaatatgtctctgtggtctcttactaaagaaaaagttgaagaactgattaaacag
agagatgcaaaagggcgagaggtcaatgatcttaaaagaaaatctccttcagatctttgg
aaagaagatttagcagcatttgttgaagaactggataaagtggaagctcaagaacgagaa
gatattctggctggaatgtctggaaaagcaattaaaggtaaagttggcaaacccaaggtg
aagaaacttcaattggaagagacaatgccctcaccttatggcagaagaataattcctgaa
attacagctatgaaggcagatgccagcaaaaagttgctgaagaagaagaagggtgatctt
gatactgcagcagtgaaagtggaatttgatgaagaattcagtggagtgccagtagaaggt
gcaggagaagaggcattgactccgtcaatgcctataaataaaggtcccaaacccaaaagg
gagaaaaaggagcctggtaccagagtgagaaaaacacctacatcatctggtaaacctact
gcaaagaaagtgaagaagcggaatccttggtcagatgatgaatccaagtcagaaagtgat
ttggaagaaacagaacctgtggttattccaagagattctttgcttaggagagcagccgct
gaaagacctaaatacacatttgatttctcagaagaagaggatgatgatgctgatgatgat
gatgataataatgatttagaggaactgaaagttaaagcatctcccataacaaatgatggg
gaagatgaatttgttccttcagatggcttggataaagatgaatatacattttcaccaggc
aaatcaaaagctactccagaaaaatctttgcatgacaaaaaaagtcaggattttggaaat
ctcttctcatttccttcatattctcagaagtcagaagatgattcagctaaatttgacagt
aatgaagaagatactgcttctgttttttcaccgtcatttggtctgaaacagacagacaaa
gttccaagtaaaacagtagctgctaaaaagggaaaaccatcttcagatacagcgcctaag
cccaagagagcccccaagcagaagaaaatagtagagactgtaaactctgactccgattca
gaatttggcattccaaagaagactacaacaccaaaaggtaaaggccgaggggcaaagaaa
aggaaagcatctggttctgaaaatgaaggtgattacaaccctggcaggaaaacatccaaa
acaacaagcaagaaaccgaagaaaacatcttttgatcaggattccgatgtggacatcttc
ccctctgacttcccttctgagccaccttctctgccacgaaccggtcgggctaggaaagaa
gttaagtactttgcagagtctgatgaagaagaagatgacgttgattttgcaatgttcaat
taa
DBGET
integrated database retrieval system
