Callithrix jacchus (white-tufted-ear marmoset): 100396005
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Entry
100396005 CDS
T03264
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100396005 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100396005 (TRIM71)
04121 Ubiquitin system [BR:
cjc04121
]
100396005 (TRIM71)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100396005 (TRIM71)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100396005 (TRIM71)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100396005 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100396005
NCBI-ProteinID:
XP_017821416
UniProt:
F6QNE6
LinkDB
All DBs
Position
17:64072821..64157500
Genome browser
AA seq
868 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSSSSASSSSSQTSTSSGGGGGAPGAAPRRLHVLP
CLHAFCRPCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGTPAGAGGHSNHRHHAHHAHPRASASAPPLPQAPPPPAPSRSA
PGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIER
GPPGAGAAAAAQQLGLGPPFPGPPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRE
CTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVV
QSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQ
VLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSS
GAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEV
SDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEG
DSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVA
CDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTR
NHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQS
ARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQ
MDRPSGIAITPDGMIVVVDFGNNRILVF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccctgagaccgatttccagatctgcctgctgtgcaaggagatgtgcggc
tcgcctgcgccgctctcctccagctcgtccgcgtcgtcgtcgtcttcgcagacgtccacg
tcgtcggggggcggcggcggggctcctggggcggctccgcgccgcctacacgtcctgccc
tgcctgcacgccttctgccgcccctgcctcgaggcgcaccggctgccggcggcgggcggc
ggcgcgcctggagagcctctcaagctgcgctgccccgtatgcgaccagaaagtagtgcta
gccgaggcggcgggcatggacgcgctgccttcctccgccttcctgctcagtaacctgctg
gacgcggtggtggccactgccgacgagccgccgcccaagaacggacgcgccggcactccg
gcgggcgcgggcggccacagcaaccaccggcaccacgcgcaccacgcgcacccgcgcgcg
tccgcctccgcgccgccactcccgcaggcgccaccgccgcctgctccttcccgctcggcc
cccggcggcccggccgcttccccgtcggcgctactgctgcgccgacctcacggctgcagc
tcgtgcgatgagggcaacgcggcttcctcgcgctgcctcgactgccaggagcacctgtgc
gacaactgcgtccgagcgcaccagcgcgtgcgcctcaccaaggaccactacatcgagcgc
ggcccgccgggtgccggcgccgcggctgcggcgcagcagctcgggcttgggccgccgttt
cccggcccgcccttctccatcctctcggtgtttcccgagcgcctcggcttctgccagcat
cacgacgacgaggtgctgcacctgtactgtgacacttgctctgtgcccatctgtcgtgag
tgcacaatgggccgacacgggggccacagcttcatctacctccaggaggcgctgcaggac
tcacgggcactcaccatccagctgctggcggatgcgcagcagggaagacaggcaatccag
ctgagcatcgagcaggcccagacggtggcggaacaagtggagatgaaggcaaaggttgtg
cagtcggaggtgaaagccgtgaccgcgcggcataagaaagccctggaggagcgcgagtgc
gagctgctgtggaaggtagaaaagattcgccaggtgaaagccaagtctctgtacctgcag
gtggagaagctgcggcaaaacctcaacaagcttgagagcaccatcagtgccgtgcagcag
gtcctggaggagggccgagcactagacatcctgctggcccgagaccgcatgctggcccag
gtgcaggagctgaagaccgtgcggagcctcctgcagccccaggaagatgaccgagtcatg
ttcacacccccagatcaggcattgtaccttgccatcaagtcttttggctttgttagcagc
ggggcctttgcaccactcaccaaggccacaggcgacggcctcaagcgtgccctccagggt
aaggtggcctccttcacagtcattggttatgaccacgatggtgagccccgcctctcggga
ggtgatctgatgtcagctgtggtccttggccctgatggcaacctgtttggtgcagaagtg
agcgatcagcaaaatgggacatatgtggtgagttaccggccccagctggagggcgagcac
ctggtgtcagtgacactgtgcaaccagcacatcgagaacagccctttcaaggtggtggtc
aagtcaggccgcagctacgtgggcatcgggctcccaggcctgagcttcggcagcgagggt
gacagcgatggcaagctctgccgcccttggggcgtgagtgtagacaaggagggctacatc
attgtcgccgaccgcagcaacaaccgcatccaggtgtttaagccctgtggcgccttccac
cacaaattcggcaccctgggctcccggccagggcagttcgaccgaccagccggggtggcc
tgtgacgcctcacgcaggatcgtggtggctgacaaggacaatcatcgcatccagatcttc
actttcgagggccagttcctcctcaaatttggtgagaagggaaccaagaacgggcagttc
aactacccttgggatgtggcagtgaattctgaaggcaagatcctggtctcagatacgagg
aaccaccggatccagctgtttgggcctgacggtgtcttcctaaataagtacggcttcgag
ggggctctctggaagcactttgactccccacggggtgtggccttcaaccatgagggccac
ttggtggtcaccgacttcaacaaccaccggctcctggtcattcaccccgactgccagtca
gcacgcttcctgggctcagagggcacaggcaatgggcagttcctgcgcccacaaggtgtc
gccgtggaccaggaagggcgtatcatcgtggcggattccaggaaccatcgggtacagatg
tttgaatccaacggcagcttcctgtgcaagtttggtgctcaaggcagcggtttcgggcag
atggaccgcccttcaggcatcgccatcacccccgacggaatgatcgtcgtggtggacttt
ggcaacaatcgaatcctcgtcttctaa
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integrated database retrieval system
