Callithrix jacchus (white-tufted-ear marmoset): 100396053
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Entry
100396053 CDS
T03264
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04020
Calcium signaling pathway
cjc04080
Neuroactive ligand-receptor interaction
cjc05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100396053 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100396053 (PTAFR)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
100396053 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cjc04030
]
100396053 (PTAFR)
G protein-coupled receptors [BR:
cjc04030
]
Rhodopsin family
Others
Platelet activating factor
100396053 (PTAFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
CitMHS
SHNi-TPR
SK_channel
Motif
Other DBs
NCBI-GeneID:
100396053
NCBI-ProteinID:
XP_017829948
Ensembl:
ENSCJAG00000022642
UniProt:
F7IRI3
LinkDB
All DBs
Position
7
Genome browser
AA seq
342 aa
AA seq
DB search
MEPQDSSHVDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPSKKLNEIKIFMVNLT
MADMLFLITLPLWIVYYQNRGNWILPKFLCNLAGCFFFINTYCSVAFLGVITYNRFQAVT
QPIKTAQTNTRKRGISLSLAIWVAIVGAASYFLIMDSTNTVSNSAGSGNITRCFEHYEKG
SMPVLIIHIFIVFSFFLVFLIIFFCNLVIIRTLLMQPVQQQRNAEVKRRALWMVCTVLAV
FIICFVPHHVVQLPWTLAELGFQNSNFHQAINDAHQVTLCLLSTNCVLDPVIYCFLTKKF
RKHLSEKFYSMRSSRKCSRATTDTVTEVVVPLNQVPGTPLKN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagccacaagactcctcccacgtggactctgagttccgatacactctcttcccgatt
gtttatagcatcatctttgtgcttggggtcattgctaatggctacgtgctgtgggtcttt
gcccgcctgtacccttccaagaaactcaatgagataaagatcttcatggtgaacctcacc
atggcggacatgctcttcttgatcaccctgccactgtggattgtctactaccaaaaccgg
ggcaactggattctccccaaattcctgtgcaacctggctggctgcttcttcttcatcaac
acctactgctctgtggccttcctgggcgtcatcacttataaccgtttccaggcagtgact
cagcccatcaagactgctcagaccaacacgcgcaagcgtggtatctctttgtccctggct
atctgggtggccattgtgggggctgcatcctacttcctcatcatggactccaccaacaca
gtgtccaacagtgctggctccggcaatatcacccgctgcttcgagcattacgagaagggc
agcatgccagtcctcatcatccacatcttcatcgtgttcagcttcttcctggtcttcctc
atcatcttcttctgcaacctggtcatcattcgtaccttgctcatgcagccggtgcagcag
cagcgcaatgctgaagtcaagcgccgggcgctgtggatggtgtgcacggtcttggcggtg
tttatcatctgctttgtgccccaccacgtggtgcagctgccctggaccctggctgaactg
ggattccagaacagcaacttccaccaggccattaacgacgcacatcaggtcaccctctgc
ctccttagcaccaactgtgtcttagaccctgtaatctactgtttcctcaccaagaagttc
cgtaagcatctctccgaaaagttctacagcatgcgaagcagccggaaatgctcccgggcc
accacagatacagtcactgaagtggttgtgccactcaaccaggtccctggcactcccctc
aaaaattag
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