Callithrix jacchus (white-tufted-ear marmoset): 100396141
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Entry
100396141 CDS
T03264
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100396141 (TAF1C)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100396141 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
100396141
NCBI-ProteinID:
XP_002761259
Ensembl:
ENSCJAG00000003961
UniProt:
F6QR88
LinkDB
All DBs
Position
20:complement(38438145..38447000)
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AA seq
843 aa
AA seq
DB search
MDFPSSLRPTLFMTGPLGLNDVSDLSMCSWQNVLTQPEAQPQNLKNGALHVTKDLLWEPA
TPGPLPMLPPLVDSWEPGLTAQDLLFRGGYRYRRRPRVVLDVTEQISRFLWDHGDIAFAP
IGKLMLENFKLEGAGRCTKKTTVVSVKKLLQDLGGHQPWGCPWASLSNRQRRFSILGGPI
LGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQIGQLVYPAGGALDRLH
FQEVVLAPGDNPQFLGKPGHIQLQGPVRQVVTGTVQGETLLAVRSDYHCAVWKFGKQWQP
ALLQAIQVDKGATGISLSPHLPGELAICSRSGAVCLWSPENGLQQVYKDPETLVFRDSSS
WRWADFTAHPRVLTLGDRTGVKMIDTQGPPGCGLLLFRVGAEASCQKGERVLLTQYLRHS
SPECLPPTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSPILLAQLLPPPRPGCVQPLLL
GGQAGHLQLLHLAGEGVSAPRLAGPPQSLPSRTDSLPAFPLLEPKIQWRLQERLKAPTIG
LAAVVPPLPSASTPGLVVFQLSVAGDVFYQQLRPQADSSPRRDAQPPGDTRPDCRAPTAS
WTPQDTAGCSQWLKALLKVPLAPPVWTAPTFNHHHLLGSMELQREEGVVQQPGVLREAMA
QGRLLLQRDLGSLPLADPPPAPESGPADELSERLREAWAGRGAAWWERRRQARTSGPRRQ
PRRPKRRTQLSSTFSFSGHVDPSDGTSPPHSPEGPPAGALPRSPITSPSQELTPDAWSQG
IPSERRQTLHDYMAKLPLQRDTPGHAGTPPSSQASSTRATHSRQHTPILSGSQHPRKKPR
MGF
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggactttcccagctccctccgccccacattgtttatgaccggcccccttggtctgaac
gatgtctctgacctgtccatgtgcagctggcagaacgtgctgactcagccagaggcccag
ccccagaacttgaagaatggggcactgcatgtgaccaaggacctgctgtgggagccggcg
acccctgggcctctccccatgctgcctccccttgtcgattcctgggaacctggcctgact
gcccaggacctgctcttccgaggagggtaccggtatcggaggcgaccccgagtcgtgctg
gatgttactgagcagatcagccggttcctctgggatcatggagacatagcctttgcacca
atagggaagctgatgctggagaatttcaagctggagggagcagggcgctgcaccaagaag
acgacagttgtcagtgtgaagaagctgctccaggacctcggtggacaccagccctggggg
tgtccctgggcttccctcagcaaccgacaacgccgcttctcaatcctcgggggccccatc
ctgggcacatcggtggccagccacttggcagagctgctgcatgaggagctggtgctgcga
tgggagcagctacttctggatgaggcctgcaccgggggcgcgctggcctgggtgcctgga
aggacgccccagatcgggcagctggtctaccctgctggaggcgccctggacaggctgcat
ttccaagaggttgttctggccccaggtgacaaccctcaatttcttgggaaacctggacac
atccagctccagggacctgtccggcaggtggtgacaggcaccgtccagggagaaactctg
ctggctgtccgctctgactaccactgtgccgtgtggaagttcggtaaacagtggcagcca
gcccttctgcaggcaatacaggtggacaagggggccacagggatcagcctcagccctcac
ctgcctggggagctggccatctgcagccgctcaggagccgtctgcctgtggagccctgag
aatgggctgcagcaagtctacaaggatcctgagaccctcgtgttccgggactcctcttcc
tggcgttgggcagacttcactgcccaccctcgggtgctgactctgggtgaccgcactgga
gtgaagatgattgacactcagggcccaccgggctgtggtctgttgctttttcgtgtgggg
gcagaggcttcatgccaaaaaggggaacgtgtcctgctcacccaatacctgaggcactcc
agccctgaatgcctccctcctactctccatctcgtctgtacccagttctctctctaccta
gtggacgagcgcctccccctggtgccgatgctgaagtggaaccacggccttccctccccg
atcctgctggcccagctgctgcctccgccccggcccggctgtgtgcagcctctgctcctg
ggaggccaggccgggcatctacagttgctgcacctggcaggagagggggtgtcggcaccc
cgcctggcagggcccccccagtctcttccttccaggaccgactctctccctgcgtttcct
ctgctggagcctaagatccagtggcggctgcaggagcgcctgaaagctccgaccataggt
ctggccgctgttgtcccacccttgccctcggcctccacaccaggcctggtggtcttccag
ctctccgtggcgggagatgtcttctaccagcagctccgcccccaggccgactccagcccc
cgcagagatgcccagcctcccggtgacaccagacctgactgccgtgccccaacggcttcc
tggacgccccaggacactgctggctgcagccagtggctgaaggccctgctaaaggtgcca
ctggctcctcctgtgtggacagcacccaccttcaaccaccaccacctgctgggcagcatg
gagctgcagagggaggaaggggtggtgcagcagccgggcgtgctccgagaggccatggcc
cagggtcggctcctgctgcagagagacctgggctccctccccttggcagacccaccccct
gcacccgaatcaggcccagcagatgagctcagtgagcgcctgcgggaagcctgggcaggc
cgaggggctgcctggtgggagaggcggcggcaggccaggacctcagggcccaggagacag
cccaggcggcccaagcgccggacccagctgtccagcaccttttcattcagtggccatgtg
gacccctcagatggcaccagcccccctcacagtcctgagggaccacctgctggtgctcta
cctcggtcccccataacctcaccctcccaggagttgactccagatgcatggtcccagggc
atcccctcagagcggcggcagaccctccatgactacatggccaagctaccactccaaagg
gacaccccaggacatgctggcacacccccctcctcccaggcctccagcacccgggccacc
cactcccggcagcacacacccatcctctctggctctcagcacccccggaaaaagcctcga
atgggcttctga
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