Callithrix jacchus (white-tufted-ear marmoset): 100396403
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Entry
100396403 CDS
T03264
Symbol
ABCA6
Name
(RefSeq) ATP-binding cassette sub-family A member 6 isoform X1
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100396403 (ABCA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100396403 (ABCA6)
Transporters [BR:
cjc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100396403 (ABCA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_15
RsgA_GTPase
SMC_N
AAA_29
AAA_23
PH_SPO71
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
100396403
NCBI-ProteinID:
XP_002748709
Ensembl:
ENSCJAG00000000174
UniProt:
F7D8Y2
LinkDB
All DBs
Position
5:complement(121173917..121240751)
Genome browser
AA seq
1630 aa
AA seq
DB search
MNMKQKSVYQQTKALLCRNFLMKWRMKRESLLEWGLSILLGLSVALFSSGMRNVQFPGMA
PQDLGRVDQFNSSSLIIVYTPVSNLTQQIMNKTAHTPFLKGSNIIGAPNKTFMEEILLEN
LPFAVGIIFNETFSYKLRFFQGYSIPLWKEEDFSAHCWDGYGERWCTLTKYWNEGFVALQ
TAINTAIIEITTNQPVMEELMSVTAITMKTLPFITKDLLHNEIFILFSLLCFSPLVYFIS
LNVTKERKKCKNLMKMMGLQDSAFWFSWGLIYAGFIFIISIFITMIITLTQIVIMTGFMV
IFILFFLYGLSLVALVFLMSVLLKKAVLTNLVVFLLTLCWGCMGFTVLYEQLPSSLEWIL
SICSPFAFTAGMTRVIKLDYNLNDVIFPDSSGDSYTMIATFSILLLDGLIYLLLTLYFDK
ILPYGDERHYSPLFFFNSSSCFQHQRTDNKVIEKEIELEHPSDDYFEPVAPEFQGKEAIR
IRNVKKEYKGKSGKVEALKGLHFDVYEGQITAILGHDGAGKSSLLNILNGLSVPTEGSVM
IYNKNLSEMQDLEEIRKITGVCTQLNVQFDTLTVKENLSLFAKIKGIHPQEVEQEVQRIL
LELDMQNIQDSLAKHLSGGQKRKLTFGIAILGDPQVLLLDEPTTGLDPFSRDQVWSLLRE
HKANRVILFSTQSMDEADILADRKVIMSNGRLKCAGSSIFLKRRWGLGYHLSLYRNEICN
PEQITFFITHHIPDAKLKTENKTKLVYTLPLERTNTFPDLFSDLDKCCSQGVTGYDISMS
TLNEVFMKLEGQTTIEQDFEQVEMIRDSESLNEMELAHSSFSEMQTAVSDMGLWRMQVCA
MAWLRFLKLKRQTKVLLTLLLVFGIATFPLIVENIIYAILNEKSDREFKTELYFLSPGQL
PQEPRTSLLIINNTESNIEDFIKSLKHQNILLEVDDFENRNGTDGISYNGAIIVSGKQKD
YRFSIVCNTKRLHCFPVLMNIISNGLLHMFNHTQHIRIDSSPFPISHVRLATGLPDGSIF
LILVLCSTSPYITMGSISDYKKKAKSQLWISGLYTSAYWCGQALVDVNVFILILLSMYLI
VYIENMQYLYITSEIVLALAIVTPGYAASLVFLMYVISFIFRRRRKNSGLWSFCFFFASL
NMFTITLINYSDLNVLISTIVLVPSYTLLGFQTFLEMREQPHQREFPEAHFELSVTDFLV
SCIPYFQALLFIFVLRCMELKYGKKRMRKDPVFRISPQIRDAKPNPEEPTDEDEDVQAER
IRTATALTTSNVDEKPVITASCLHKEYAGQKKSCFLKRKKKIAARNISFCVQEGEILGLL
GPNGAGKSSSIRMISGITKPTAGEVELKGCSSVLDRKGDGGDGKFLKFLGYCPQENVLWP
MLTVREHLEVYAAVKGLRKGAARLAIARLASAFKLHEQLNVPVQKLAAGTTRKLCFVLSL
LGNSPVLLLDEPSTGIDPTGQQQMWQAIKAVVKNTERSVLLTTHNLAEAEALCDRVAIMV
SGRLRCIGTIQHLKSKLGKNYTLELKVKEPSQVTLVHTEILKLFPQAGRQERHSSLLIYK
LPMADVYPLSQTFHKLESVKHNFNLEEYSLSQCTLEKVFLELSKEQEVENFDEEVDTTMR
WKLLPHSDEP
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaacagaaaagtgtgtatcagcaaactaaagcacttctgtgcaggaatttt
cttatgaaatggaggatgaaaagagagagcttattggaatggggcctctcaatacttcta
ggactgagtgttgctctgttttccagtggcatgagaaatgtccagtttcctggaatggct
cctcaggatctgggaagggtagatcaatttaatagttcttctttaattattgtgtataca
ccagtatctaatttaacccaacagataatgaataaaacagcacatactccttttttgaaa
ggaagcaatatcattggggcaccaaataaaacattcatggaagaaatacttctggaaaat
ttaccatttgctgtgggaatcatctttaatgaaactttctcttataagttaagatttttt
cagggatatagcattccactttggaaagaagaagatttctcagctcattgctgggatgga
tatggcgagcgttggtgtacattgaccaaatactggaatgaaggatttgtggctttacaa
acagctattaatactgccattatagaaatcacaaccaatcaacctgtgatggaggagttg
atgtcggttactgctataactatgaagacattacctttcataactaaagatttgcttcac
aatgagatatttattttattctccttgctttgtttctccccacttgtatattttatatca
cttaatgtaacaaaagagagaaaaaagtgtaagaatttgatgaaaatgatgggtctccaa
gattcagcattctggttctcctggggtttaatctatgctggcttcatctttattatttcc
atattcattacaatgatcataacactcacccaaattgtaatcatgactggcttcatggtc
atatttatactctttttcttatatggcttatctttggtagctttggtgttcctgatgagt
gtgttgttgaagaaagctgtcctcaccaatttggttgtgtttctccttaccctctgttgg
ggatgtatggggttcactgtattgtatgaacagcttccttcatctctggagtggattttg
agtatttgtagcccttttgcctttactgctggaatgactcgggtgatcaaactggattat
aacttgaatgatgtaatttttcctgactcttcaggagactcatatacaatgatagcaact
ttttctatattgcttttggatggtctcatctacttgctattgacgttatactttgacaaa
attttaccctatggagatgagcgccattattctccattatttttcttcaattcatcatct
tgtttccaacaccaaaggactgataataaggttattgagaaagaaatagaacttgagcat
ccctctgatgattattttgaaccagtagctcctgaatttcaaggaaaagaagccatcaga
atcagaaatgttaagaaagaatataaaggaaagtctggaaaagtggaagcattgaaaggc
ttgcactttgacgtatatgaaggtcaaatcacggccattctgggtcatgatggagctggc
aaatcttcactgctaaatattcttaatggattgtctgttccaacagaaggatctgttatg
atctataataaaaatctttctgaaatgcaagacttggaggaaatcagaaagataactggt
gtctgtactcaattaaatgttcaatttgacacactcactgtgaaggaaaacctcagcctt
tttgctaaaataaaagggattcatccacaggaagtagaacaagaggtacaacgaatatta
ttggaattggacatgcaaaacattcaagatagccttgctaaacatttaagtgggggacag
aaaagaaagctgacttttgggattgccattttaggagatcctcaggttttgctcttagat
gaaccaactactggattggatcccttttccagagatcaagtttggagccttctgagagag
cataaagcaaatcgtgtgatccttttcagtacccagtccatggatgaggctgacattctg
gctgatagaaaagtgatcatgtccaatgggagactgaagtgtgcaggttcttctatcttt
ttgaaaagaaggtggggtcttggatatcacctaagtttgtataggaatgaaatatgcaat
ccagaacaaataacattcttcattactcatcacatccccgatgctaaattaaaaacagaa
aacaaaacaaagcttgtatatactttgccattggaaaggacaaatacatttccagatctt
ttcagtgatctggataagtgttgtagccagggagtgacaggttatgacatttccatgtca
actctgaatgaagtctttatgaaactggaaggacagacaactattgaacaagatttcgaa
caagtggagatgataagagactcagaaagcctcaatgaaatggagctggctcactcttcc
ttctctgaaatgcagacagctgtgagtgacatgggcctctggagaatgcaagtctgtgcc
atggcatggctccgtttcttaaagttaaaacgtcagaccaaagtattattgaccctatta
ttggtatttggaattgcaacattccctttgattgtggaaaatataatttatgctatatta
aatgaaaagagtgatcgggaatttaaaaccgaattgtattttctctctcctggacaactt
ccccaggaaccccgtaccagcctgttgatcatcaataacacagaatcaaatattgaagat
tttataaagtcactgaagcatcaaaatatacttttagaagtagatgactttgaaaacaga
aatggtactgatggcatctcatacaatggagctattatagtttctggtaaacagaaggat
tatagattttcaattgtgtgtaataccaagagattgcactgttttccagtccttatgaat
attatcagcaacgggttacttcacatgtttaatcacacacaacatattcgaattgattca
agcccatttcctattagccatgtaagacttgcaacagggctgccagatggttccattttc
ttaattttggttctatgtagcacttctccttatatcaccatgggcagcatcagtgattac
aagaaaaaagcaaagtctcagctatggatttcgggcctctacacttctgcttactggtgt
gggcaggcactagtggacgttaatgtcttcattttaattctcctttcaatgtatttgatt
gtctacatagaaaacatgcagtacctttatattacaagcgaaattgtgcttgctttggct
atagttactcctggttatgcagcttctcttgtcttcctgatgtatgtcatatcatttatt
tttcgcagaaggagaaaaaacagtggcctttggtcattttgcttcttttttgcctccctc
aacatgtttaccatcactttaatcaattattctgacctaaatgtattgatttccaccata
gtattggttccttcgtatactttgcttggatttcaaacatttttggaaatgagagagcag
ccacaccagagagaatttccagaggcacattttgaattgagtgtcactgattttctagtc
agctgcataccctactttcaggctttgctattcatttttgttctaagatgcatggaacta
aaatatggaaagaaaagaatgcgaaaagatcctgtcttcagaatttccccccaaattaga
gatgctaaaccaaatccagaagaacccacagatgaagatgaagatgttcaagcagaaaga
ataagaacagcaactgctctgaccacttcaaatgtggatgagaaacctgttataactgcc
agctgtctacacaaagaatatgcaggccagaagaaaagttgctttttaaagaggaagaag
aaaatagcagcaagaaatatctctttctgtgttcaagaaggtgaaattttgggattgcta
ggacccaatggtgctggtaaaagctcatctattagaatgatatctgggatcacaaagcca
actgctggcgaggtggaactgaaaggctgcagttcagttttggatcgaaagggggatggc
ggggacggcaagttcctcaagttcctggggtactgccctcaggagaacgttctgtggccc
atgttgacggtgagggagcacctggaggtgtatgctgccgtgaaggggctcaggaaaggg
gccgcgaggctcgccatcgcaagattggcaagtgctttcaaattgcatgagcagctgaat
gttccggtgcagaaattagcagcaggaaccacaagaaagttgtgttttgtgctgagcctc
ctgggaaactcacctgtcttgctcctggatgagccatctactggcatagaccctacaggg
cagcagcaaatgtggcaggcaatcaaggcagttgttaaaaacacagagaggagtgtcctc
ctgaccacccataacctggctgaggcagaggccttgtgtgaccgtgtggccatcatggtg
tctggaaggcttagatgcattggaaccatccaacacctgaaaagcaaacttggcaagaat
tacactctagagctaaaagtgaaggaaccttctcaagtgactttggtccacactgagatt
ctgaagcttttcccacaggctggaagacaggaaaggcattcctccttgttaatctataaa
ctgcccatggcagatgtttaccctctatcacagacctttcacaaattagagtcagtgaag
cataactttaacttggaagaatacagcctctctcagtgcacattggaaaaggtattctta
gagctttctaaagagcaggaagtggaaaattttgatgaagaagttgatacaactatgaga
tggaaactcctccctcattcagatgaaccttaa
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integrated database retrieval system
