Callithrix jacchus (white-tufted-ear marmoset): 100396722
Help
Entry
100396722 CDS
T03264
Symbol
HARS1
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100396722 (HARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjc01007
]
100396722 (HARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100396722 (HARS1)
Enzymes [BR:
cjc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
100396722 (HARS1)
Amino acid related enzymes [BR:
cjc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
100396722 (HARS1)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100396722 (HARS1)
Prokaryotic type
100396722 (HARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
HHH_3
tRNA-synt_2
Sugarporin_N
tRNA-synt_2d
Virul_Fac
Motif
Other DBs
NCBI-GeneID:
100396722
NCBI-ProteinID:
XP_035142299
Ensembl:
ENSCJAG00000016282
LinkDB
All DBs
Position
2:complement(37090263..37108122)
Genome browser
AA seq
509 aa
AA seq
DB search
MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
GTRDYSPRQMAVREKVFDIIIRCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKLNNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVPDSKFRTICSSVDK
LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLR
DLKLLFEYLALFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLVASAQKKL
LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
VTSREEVDVRREDLVEEIKRRTGQPLCVC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcgtgcggcactggaggagctggtgaaacttcagggagagcgcgtgcgaggc
ctcaaacagcagaaagccagcgccgagctgatcgaggaggaggtggcaaaactgctgaaa
ctgaaggcacagctgggtcctgatgaaagcaaacagaagtttgtgctcaaaacccccaag
ggcacaagagactacagtccccggcagatggcagttcgcgagaaggtgtttgacatcatc
atccgttgcttcaagcgccatggtgcagaagtcattgatacacctgtatttgaactaaag
gaaacactgacgggaaagtatggggaagactccaagcttatctatgacctgaaagaccag
ggcggagagctactatcccttcgctatgacctcactgttccttttgctcggtatttggca
atgaataaactgaacaacattaaacgctaccacatagcaaaggtatatcggcgggataac
ccagccatgacccgaggccgataccgggaattctaccagtgtgattttgacattgctgga
aactttgatcccatgatccctgatgcagagtgcctgaagatcatgtgcgagatactgagt
tcacttcagataggcgacttcctggtcaaggtaaatgatcggcgcatcctagatgggatg
tttgccatctgtggtgttcctgacagcaagttccgtaccatctgctcctcagtagacaag
ctggacaaggtgtcctgggaagaagtgaagaatgagatggtaggagagaagggcctcgcg
cccgaggtggctgaccgcattggggactatgtccagcagcatggtggggtatccctggta
gaacagctgctccaggatcctaaactatcccaaaacaagcaggccttggagggcctgaga
gacctgaagctgctctttgagtacctggccctatttggcattgatgacaaaatctccttt
gacctgagccttgctcgagggctggattactacactggggtgatctatgaggcagtcctg
ctacagaccccagcccaggcaggggaagagcccctgggtgtgggcagtgtggctgctgga
gggcgctatgatgggctagtgggcatgtttgaccccaaaggacgcaaggtgccatgtgtg
ggactcagcattggggtggagcggattttctccattgtggaacagagactggaggctttg
gaggagaaggtgcggaccacggagacacaggtgcttgtggcatctgcacagaagaagctg
ctagaagagagactaaagcttgtctcagaactgtgggatgctgggatcaaggctgagctg
ctgtacaagaagaacccaaaactactgaaccagttacagtactgtgaggaggcaggcatc
ccactggtggctatcatcggcgagcaggaactcaaggatggggtcatcaagctccgttca
gtgactagcagagaagaggtggatgtccgaagagaagaccttgtggaggaaatcaaaagg
agaacaggccagcccctctgcgtctgctga
DBGET
integrated database retrieval system
