Callithrix jacchus (white-tufted-ear marmoset): 100396767
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Entry
100396767 CDS
T03264
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100396767 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100396767 (ABCA5)
Transporters [BR:
cjc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100396767 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
MMR_HSR1
AAA_23
Motif
Other DBs
NCBI-GeneID:
100396767
NCBI-ProteinID:
XP_002748711
Ensembl:
ENSCJAG00000000147
LinkDB
All DBs
Position
5:complement(121327333..121429542)
Genome browser
AA seq
1642 aa
AA seq
DB search
MSTAIREVGVWRQTRTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILISMMHPNKKYEE
VPDTELNPMDKFILSNLILGYTPVTNITSSIMQKVSTDHLPDVIITEEYSNEKEMLTSSL
SKPSNFVGVVFKDSMSYELRFFPDMIPVSSIYMDSRGGCSKSCEATQYWSSGFTVLQASI
DAAIIQLKTNVSLWKELESTKAVIMGETAAVEIDTFPRGVILIYLVIAFSPFGYFLAIHI
VAEKEKKIKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASLLFPQSSSIVIF
LLFFLYGLSSVFFALMLTPLFKKSKHAGIVEFFVTVAFGFIGLMIILIESFPKSLVWLFS
PFCHCTFVIGIAQVMYLEDFNEGALFSNLTAGPYPLIITIIMLTLNSIFYVLLAVYLDQV
IPGEFGLRRSSLYFLKPSYWSKSKRNYKELSEGNVNGNVNFSEIIEPVSSEFVGKEAIRI
SGIQKTYRKKGENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASI
YGHRVSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGIPANNIIQEVQKVLL
DLDMQTIKDNQAKKLSGGQKRKLSLGIAVLGNPKVLLLDEPTAGMDPCSRHIVWNLLKYR
KANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYIDKFCAT
ESLSSLVKQHIPGATLLQQNDQQLVYSLPFKDMDKFSGLFSALDSHSNLGIISYGVSMTT
LEDVFLKLEVEAEIDQADYSVFTQQPLEEEMDSKSFDEMEQSLLILSETKASLVSTMSLW
KQQMYTIAKFHFFTLKRESKSVRSVLLLLLIFFAVQIFMFLVHHSFKNAVVPIKLVPDLY
FLKPGDKPHKYKTSLLLQNSTDSDISELISFFTSQNIMVTMFNDSDYVSVAPHSAALNVM
RSEKDYIFAAVFNSTMVYSLPILVNIISNYYLYHLNMTETIQIWSTPFFQEITDIVFKIE
LYFQAALLGIIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQAVVDIPLFFII
LTLMLGSLLAFHYGLYFYTVKFLAVVFCLIGYVPSVILFTYIASFTFKKILHTKEFWSFI
YSVTALACIAITEITFFMGYTIATILHYAFCIIVPIYPLLGCLISFIKISWKNIRKNEDS
YNSWDRLSVAVILPYVQCVLWIFLLQYYEKKYGGRSIRKDPFFRNLSKKSKNRKFPEPPN
NEDEDEDVKAERLKVKELMSCQCCEEKPSIMISNLHKEYDDKKDFLLSRKVKKVATKYIS
FCVKKGEILGLLGPNGAGKSTIINILVGDIEPTSGKVFLGDYSSETSEEDDSIKCMGYCP
QINPLWPDTTLQEHFEIYGAIKGMSASDMKEVITRITNALDLKEHLQKTVKKLPAGIKRK
LCFALSMLGNPQITLLDEPSTGMDPKAKQHMWRAIRTAFKNKKRAAILTTHYMEEAEAVC
DRVAIMVSGQLRCIGTVQHLKSKYGKGYFLEIKLKDWVENLEVDRLQREIKYIFPNASRQ
ESFSSILAYKIPKEDVQSLSQSFFKLEEAKHAFAIEEYSFSQATLEQVFVELTKEQEEED
NSCGTLNSTLWWERTQEDRVVF
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgcaattagggaggtgggagtttggagacagaccagaacactcctactgaag
aattacttaattaaatgccgaactaaaaagagtagtgttcaggaaattctttttccacta
ttttttttattttggttaattttaattagcatgatgcatccaaataagaaatatgaagaa
gtgcctgatacagaacttaatcctatggacaaatttattctttctaatctaattcttggg
tatactccagtgactaacattacaagcagcatcatgcagaaagtgtctactgatcacctt
cctgatgtcataattactgaagaatattcaaatgaaaaagaaatgttaacatccagtctt
tcgaagcccagcaactttgtaggtgtggttttcaaagactccatgtcctatgaacttcgt
ttttttcctgatatgattcccgtatcttctatttatatggattcaagaggtggctgttca
aaatcatgtgaggctactcagtactggtcctcaggtttcacagttttacaagcatccata
gatgctgccattatacagttgaagacgaatgtttctctttggaaggagctggagtcaact
aaagctgttattatgggagaaactgctgctgtagaaatagatacctttccccgaggagta
attttaatatacctagttatagcattttcaccttttggatactttttggcaattcatatc
gtagcagaaaaagaaaaaaaaataaaagaatttttaaagataatgggacttcatgatact
gccttttggctttcctgggttcttctatatacaagtttaatttttcttatgtcccttctt
atggcagtcattgcaacagcttctttgttatttcctcaaagtagcagcattgtgatattt
ctgctttttttcctttatggattatcatctgtattttttgctttaatgctgacacctctt
tttaaaaaatcaaaacatgcgggaatagttgaattttttgtcactgtggcttttggattt
attggccttatgataatcctcatagaaagttttcccaaatcgttagtgtggcttttcagt
cctttctgtcactgtacttttgttattggtattgcacaggttatgtatttagaagatttt
aatgaaggcgctttattttcaaatttgactgcaggcccatatcctctaattattacaatt
atcatgctcacacttaacagtatattctatgtcctcttggctgtctatctagatcaagtc
attccaggggaatttggcttacgaagatcatctttatattttctgaagccgtcatattgg
tcaaagagtaaaagaaattataaggagttatcagagggcaatgttaatgggaatgttaat
tttagtgaaattattgagcctgtttcttcggaatttgtaggaaaagaagccataagaatt
agtggtattcagaagacatacagaaagaaaggtgaaaatgtggaggctttgagaaatttg
tcgtttgacatatatgagggtcagattactgccttacttggtcacagtggaacaggaaag
agtacactgatgaatattctttgtggactatgcccaccttctgatgggtttgcatctata
tatggacacagagtctcagaaatagatgaaatgtttgaagcaagaaaaatgattggcatt
tgtccacagttagatatacactttgatgttttgacagtagaagaaaatttatcaattttg
gcttcaatcaaagggataccagccaacaatataatccaagaagtgcagaaggttttacta
gatttagacatgcagactatcaaagataaccaagctaaaaaattaagtggtggtcaaaag
agaaagctctcattaggaattgctgttcttggaaacccaaaggtactactgctagatgaa
ccaacagctggaatggacccctgttctcgacatattgtttggaatcttttaaaatacaga
aaagccaatcgggtgacagtgttcagtactcatttcatggatgaagctgacattcttgca
gataggaaagctgtgatatcacaaggaatgctgaaatgtgttggttcttcaattttcctc
aaaagtaaatgggggattggctaccgcctgagcatgtacatagacaaattttgtgccaca
gaatctctttcttcactggttaaacaacatatacctggagctactttattacaacagaat
gaccaacaactcgtgtatagcttgcctttcaaggacatggacaaattttcaggtttgttt
tctgccctagacagtcattcaaatttgggtatcatttcttatggtgtttccatgacgact
ttggaagatgtatttttaaagctagaagttgaagcagaaattgaccaagcagattatagt
gtatttactcagcagccactggaggaagaaatggattcaaaatcttttgatgaaatggaa
cagagcttacttattctttctgaaaccaaggcttctctagtgagcaccatgagcctttgg
aaacaacagatgtatacaatagcaaagtttcatttctttaccttgaaacgtgaaagtaaa
tcagtgagatcagtgttgcttctgcttttaatattttttgcagttcagatttttatgttt
ttggtgcatcactcttttaaaaatgctgtggttcccataaaacttgttccagacttatat
ttcctaaaacctggagacaaacctcataaatacaaaacaagtctgcttcttcaaaattct
actgactcagatatcagtgaacttattagcttttttacaagccagaacataatggtgacg
atgtttaatgacagtgactatgtatctgtggctcctcatagtgcagctctaaatgtgatg
cgttcagaaaaggactatatttttgcagctgttttcaacagtactatggtttattcttta
cctatattagtgaatatcattagtaactactatctttatcatttaaatatgactgaaacc
atccagatctggagtaccccattttttcaagaaattaccgacatagttttcaaaatagag
ctgtattttcaagcagctttgcttggaatcattgttactgcaatgccaccttactttgcc
atggaaaatgcagagaatcataagatcaaagcttatactcaacttaaactttctggtctt
ttgccatctgcatattggattggacaagctgttgttgatatccccttattttttatcatt
cttactttgatgctaggaagcttattggcatttcattatggattatatttttatactgta
aagttccttgctgtggttttttgccttattggttatgttccatcagttattctgttcact
tatattgcttctttcacctttaagaaaattttacataccaaagaattttggtcatttatc
tattctgtgacagcgttggcttgtattgcaatcactgaaataactttctttatgggatac
acaattgcaactattcttcattatgctttttgtatcatcgttccaatctatccacttcta
ggctgcctgatttctttcataaagatttcttggaagaatatacgaaaaaatgaggactcc
tataattcatgggataggctttcagtagctgttatattgccttacgtgcagtgtgtactg
tggattttcctcttacaatactatgagaaaaaatatggaggcagatcaataagaaaagat
ccctttttcagaaatctttcaaagaagtccaaaaataggaagtttccagaaccaccaaac
aatgaggatgaagatgaagatgtcaaagctgaaagactaaaggtcaaagagctgatgagt
tgccagtgttgtgaggagaaaccatccattatgatcagcaacttgcataaagaatatgat
gacaagaaagattttcttctttcaagaaaagtaaagaaagtggcaactaaatacatctct
ttctgtgtgaaaaaaggagagatcttaggactgttgggtccaaatggtgctggcaaaagt
acaattattaatattctggttggtgatattgaaccaacttcaggaaaggtatttttggga
gattattcttcagagacaagtgaagaagatgattcaataaagtgtatgggttactgtcct
cagataaaccctttgtggccagatactacactgcaggaacattttgaaatttatggagct
ataaaaggaatgagtgcaagtgacatgaaagaagtcataactcgaataacaaatgcactt
gacttaaaggaacatcttcagaaaactgtaaagaaactacctgcaggaatcaaacgaaag
ttgtgttttgctctaagtatgctagggaatcctcagattactttgctagatgaaccatct
acaggtatggatcctaaagccaaacagcacatgtggcgagcaattcgaactgcatttaaa
aacaaaaagcgggctgctattctgaccactcattatatggaggaggcagaggctgtctgt
gatcgagtagctatcatggtgtctggccagttaagatgtattggaacagtacaacatcta
aagagtaaatatggaaaaggctactttttggaaattaaattgaaggactgggtagaaaac
cttgaagtagaccgccttcaaagagaaattaagtatattttcccaaatgcaagccgtcag
gaaagtttttcttctattttggcttataaaattcctaaggaagatgttcagtccctttca
caatctttttttaagctggaagaagctaaacatgcatttgccattgaagaatacagcttt
tctcaagcaacattggaacaggtttttgtagaactcactaaagaacaagaggaagaagat
aatagttgtggaactttaaacagcacactttggtgggaacgaacacaagaagacagagta
gtattttga
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integrated database retrieval system
