Callithrix jacchus (white-tufted-ear marmoset): 100396810
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Entry
100396810 CDS
T03264
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
cjc04514
Cell adhesion molecule (CAM) interaction
cjc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100396810 (LRRC4C)
04517 IgSF CAM signaling
100396810 (LRRC4C)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100396810 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100396810 (LRRC4C)
Cell adhesion molecules [BR:
cjc04515
]
Immunoglobulin superfamily
NGL family
100396810 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
Ig_6
Sp38
DUF6715
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
100396810
NCBI-ProteinID:
XP_017833514
Ensembl:
ENSCJAG00000011116
UniProt:
F7IK41
LinkDB
All DBs
Position
11:complement(102014051..103382021)
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AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVALLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VVDWETTNVTTSLMPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggcgctgctggctcttcaacttcttgtggtggctggt
ctggtgcgggctcagacctgcccttctgtgtgctcctgcagcaaccaattcagcaaggtg
atttgcgttcggaaaaacctgcgtgaggttccggatggcatctccaccaacacacggctg
ctgaacctccatgagaaccaaatccagatcatcaaagtgaacagcttcaagcacttgagg
cacttggaaatcctacagttgagtaggaaccatatcagaaccattgaaattggggctttc
aatggtctggcgaacctcaatactctggaactttttgacaatcgtcttactaccatcccg
aatggagcttttgtatacttatctaaactgaaggagctctggttgcgaaacaaccccatt
gaaagcatcccttcttatgcttttaacagaattccttctttgcgccgactagacttaggg
gaattgaaaagactttcatacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaaccttcgggaaatacctaacctcacgccgctcataaaa
ctagatgagctggatctttctgggaatcatttatctgccatcaggcctggctctttccag
ggtttgatgcaccttcaaaaactgtggatgatacagtcccagattcaagtgattgaacgg
aatgcctttgacaaccttcagtcactagtggagatcaacctggcacacaataatctaaca
ttattgcctcatgacctcttcactcccttgcatcatctagagcggatacatctacatcac
aacccttggaactgtaactgtgacatactgtggctcagctggtggataaaagacatggcc
ccctccaacacagcttgttgtgcccggtgtaacactcctcccaatctaaaggggaggtac
attggagagctcgaccagaattatttcacatgctatgctccagtgattgtggagccccct
gcagacctcaatgtcactgaaggcatggcagctgagttgaaatgtcgggcctccacctcc
ctgacatctgtatcttggattactccaaatggaacagtcatgacacatggggcatacaaa
gtgaggatagctgtgctcagtgatggtacgttaaatttcacaaatgtaactgtgcaagat
acaggcatgtacacatgtatggtgagtaattccgttgggaatactaccgcttcagccacc
ctgaatgttactgcggcaaccactactcctttctcttacttttcaactgtcacagtagag
actatggaaccgtctcaggatgaggcacggaccacagataacaatgtgggtcccactcca
gtggttgactgggagaccacgaatgtgaccacctctctcatgccacagagcacaaggtca
acagagaaaaccttcaccatcccagtgactgatataaacagtgggatcccaggaatcgat
gaggtcatgaagactaccaaaattatcattgggtgttttgtggccatcacactcatggct
gcagtgatgctggtcattttctacaagatgaggaagcagcaccatcggcaaaaccatcat
gccccaacaaggactgttgaaatcattaatgtggatgatgagattacgggagacacaccc
atggaaagccacctgcccatgcctgctatcgagcatgagcacctaaatcactataactca
tacaaatctcccttcaaccacacaacaacagttaacacaataaattcaatacacagttca
gtgcatgaaccgttattgatccgaatgaactctaaagacaatgtacaagagactcaaatc
taa
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