Callithrix jacchus (white-tufted-ear marmoset): 100396881
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Entry
100396881 CDS
T03264
Symbol
SPTBN4
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04517
IgSF CAM signaling
cjc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100396881 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100396881 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjc04812
]
100396881 (SPTBN4)
Cytoskeleton proteins [BR:
cjc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100396881 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
100396881 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
RASSF_helical
Rv3651-like_N
Motif
Other DBs
NCBI-GeneID:
100396881
NCBI-ProteinID:
XP_054106121
Ensembl:
ENSCJAG00000014669
LinkDB
All DBs
Position
22
Genome browser
AA seq
2562 aa
AA seq
DB search
MAQEPGEVDNMEGLPAPNNNNPAARWESPDRGWEREQLAASTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYVDLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIDRYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGELEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAAEGYYDVRRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGAAGSAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRCGEEL
AAAGGAVGPGAETMQLVGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLDGL
LDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVSGLRRQLASLGGASGA
GPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQWLL
SMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNQTVQELVEGGHPSSDEVRSCQDHL
NSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQWRLS
GLEAALQALEPRQAALLEEAALLAARFPTQAARLHQGAEELGAEWGALASAAQACGEAVA
AAGRLQRFLHDLDAFLDWLVRAQEAAGGSEGPLPNSLEEADALLARHAALKEEVDQREED
YARIVAASEALLASDGAELGPGLALDEWLPHLELGWHKLLGLWEARREALVQAHIYQLFL
RDLRQALAVLCNQEMALSGAELPGTVESVEEALKQHRDFLTTMELSQQKMQVAVQAAEGL
LRQGNIYGAQAQEAVTRLLEKNQENQLRAQQWMQKLHDQLELQHFLRDCHELDGWIHEKM
LMARDGTREDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKKL
GEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPGGDLATV
NSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRLLEPLQ
ERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGDGLQAVQQHIKKNQGLRREIQ
AHGPRLEEVLERASALASLRSPEAEAVRRGLEQLQSAWAGLREAAERRQQALDAAFQVEQ
YYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQCR
ALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVALEQQYWLYQLSRQVGELEHWIAE
KEVVAGSPELGQDFEHVSVLQEKFSEFANETGTAGRERLAAVNQMVDELIECGHTAAATM
AEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTTPPE
PRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQGWK
ELLSACEDARLHVSSTADALRFHSQVRDLLSWMDGIASQIGAADKPRDVSSVEVLINYHQ
GLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSEKWDRHWEWLQ
QMLEVHQFAQEAVVADAWLTAQEPILQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERFS
SLRRLTTIEKIKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYERGLEPLARRAS
DTLSAEVRTRVGYVRQELKPERLQPRIDRLPEIPGRVEPAVPPAAPEDAAETPATPVAPV
VAEQVRPRPERQESADRAEELPRRRRPERQESVDQSEEAARRRRPERQESAEHEAAHSLT
LGRYEQMERRRERRERRLERQESSEQEMPIRGDLVKGKATLADIVEQLQEKEAGPGLPAG
PSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAP
AQGGSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDSKG
PASGSTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAV
AVSVAEHAEIARWSQTLPTTSSTDEGNPKREGGDRRASGRRK
NT seq
7689 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggaaccaggggaggtggacaacatggagggcctgcctgcccctaacaacaac
aaccctgccgcccgctgggagagtccggatcggggctgggagcgggagcagctggccgcc
tccaccgcggccgcctcgctctttgagtgctcccggatcaaggccttggcagatgagcgg
gaagctgtgcagaagaaaaccttcaccaagtgggtgaattcgcacctcgcccgcgtgggc
tgccacatcggggacctctatgtggacctccgggacggcttcgtgctcacaaggctcctg
gaagtgctgtctggggagcagctgccaaggcccacgcggggccgcatgcggatccactca
ctggagaacgtggacaaggcgctgcagtttctgaaggagcagcgcgtgcacctggagaac
gtgggctcgcatgacatagtggacgggaatcaccggctgacgctggggctggtctggacc
atcatcctgcgcttccagattcaagtcatcaaaattgagactgaggacaacagggagacg
cgctcagccaaggatgctctgctcttgtggtgtcagatgaagacagccggctaccctgag
gtaaacatccagaatttcaccaccagctggcgggacggattggccttcaatgccctcatt
caccggcacaggcccgatctcgtggacttcagcaaactcaccaagtccaacgccaactac
aacctgcagagagccttccgcacagctgagcagcacctggggctggcgcggctgctggat
cctgaagatgtgaacatggaggccccagatgagaagtccatcatcacttacgtggtctct
ttctaccactatttctccaagatgaaggctctggctgtggaggggaagcgtattgggaag
gtcctggaccaggtgttggaggtggggaagatcatagatcgctatgaggagctggcggcc
gagctgctggcctggatccaccggaccgtgggcctcatcagcaaccagaaatttgccaac
tctttaagtggggtgcagcagcagctccaggctttcacggcctattgcacgctggagaag
cctgtcaagttccaggagaagggaaacctggaggtgctgctcttcagcatccagagcaaa
cttcgtgcctgcaaccgtcgtctctttgtgcctcgggagggctgtggcatctgggatatt
gacaaggcatggggtgagctggagaaggctgagcatgagcgagaggctgccctacgggct
gagctgattcggcaggagaagctggaactactggcacagaggtttgaccacaaggtggct
atgagggagagctggctgaatgagaaccagcgtctggtctcccaggacaactttgggtat
gagctgcctgcagtggaggcagccatgaagaaacacgaagcaattgaggcggacattgca
gcctacgaggagcgggtgcagggcgtggcagagctggcccaggcattggcagccgaaggc
tactatgacgtccggcgggtggcagcccagcgtgacagcgtcctgcgtcagtgggccctg
ctaactgggcttgtgggtgcccggcggacacggctcgagcagaacctggccctgcagaag
gtcttccaggagatggtgtacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggagtgtgggcagcacctggtggaggcggatgacctgttgcagaagcatggactg
ttggagggggacattgcggcccagagtgagcgggtggaggccctcaatgccgctgccctg
cgcttctcccagctgcagggctaccagccctgcgacccgcaggtcatctgcaaccgcgtg
aaccacgtgcacggctgcctggcggagctgcaggagcaggcagcgcggcggcgcgcggag
ctggaggcctcgcggagcctgtgggcgctgctgcaggagctggaggaggccgagagctgg
gcgcgggacaaggagcgcctactggaggctgcgggcggcggcggtgcggcaggctcggcg
ggcggtgcgcacgacctgtctagcactgcgcgcctcctggcccagcacaagatcctgcag
ggcgagctgggcggacggcgggcgttgctgcagcaggccctgaggtgcggcgaggagctg
gctgcggccggcggcgccgtcggcccgggcgcggagacgatgcaactcgtggggctggcg
gagcgcgcggcgagcgcccggcgccgctggcagcggctggaagaggcggcggcgcggcgc
gagcggcggctgcaggaggcgcgggcgctgcaccagttcggcgctgacctcgacgggctc
ctggactggcttcgcgacgcttaccgcctggcagccgccggtgacttcggccacgacgaa
gcgtccagccgccgcctggcgcgccagcaccgcgcgctcactggggaggtggaggcgcat
cgcgggccagtgagcggcctgcgacgccagctggcgtctctcgggggcgccagtggcgca
gggccactggtggtggcgctgcaggtgcgcgtggtggaggccgagcagttgtttgcggag
gtgactgaagtggccgctctgcggcgccagtggctgcgggacgcgctcgctgtctaccgc
atgttcggtgaggtgcacgcgtgcgagctgtggatcggcgagaaggagcaatggctgctt
tccatgcgcgtgcccgattcacttgacgatgtagaggtggtgcaacaccgattcgagagc
ctggaccaagagatgaacagcctgatgggccgagttctggatgtgaaccaaacggtccag
gagctggtggaaggaggccaccccagttctgatgaggtgcgctcctgccaggaccacctc
aacagcaggtggaaccgcatcgtggagctagtggaacagcgcaaagaggaaatgagcgcg
gtcctgctggtggagaaccatgtgctggaagtggccgaggtgcgcgcccaggtgcgtgag
aagcggcgagctgtggagagcgcgccccgcgccggcggcgccctgcagtggcgtcttagc
ggcctagaggccgctctgcaggcgctcgagcctcgtcaggcggcccttctggaggaggca
gcactgctggctgcgcgcttcccgacgcaggcagcgcggctgcaccagggcgcagaggag
ctgggcgccgagtggggggcactggccagcgcggctcaggcttgcggcgaggcggtggcg
gcagcagggcgtctgcagcgctttctgcatgacctcgacgctttcctggactggctggtg
cgcgcccaggaggcggcgggcggcagtgaggggcccctgcccaacagcctagaagaggcg
gacgcgctgctggcacgccacgctgcgctcaaggaagaggtggaccagcgcgaggaagac
tatgctcgcatcgtggcggccagcgaagcgctgctggcctccgacggtgcagagttgggc
ccgggcctggcactagacgagtggctgccgcaccttgaacttggctggcataaactgctc
ggattgtgggaggcgcgcagggaggcactggtccaggcgcacatctaccagctgtttctg
cgggatctacgccaggcgctcgcggtgttgtgtaaccaggagatggcgctgtctggtgca
gagctcccgggcacggtggaatcagtggaggaggcgctgaagcagcatcgggattttctc
accaccatggagctgagccagcaaaagatgcaggtggccgtgcaggctgcggagggcctg
ctgaggcagggcaacatctacggggcacaggcccaggaggctgtgacccggctgctggag
aagaaccaagaaaaccagttacgggcccagcaatggatgcaaaagctacatgaccaactt
gagctgcagcacttcctccgagactgccatgagctggatggctggatccatgagaagatg
ctgatggcgcgggatggcacgagggaggacagccacaagctgcataagagatggctccgg
caccaggcattcatggccgagctggctcagaataaggagtggctggagaagattgagagg
gagggccagcagctgatgcaggagaagcccgaactggcggcctctgtgcggaagaaactg
ggcgagatccgccagtgctgggcagagctggagagcaccacccaggccaaggcacggcag
ctctttgaggccagcaaagcagaccagctggtacagagcttcgctgagctggacaagaag
ctcctccacatggagagccagctgcaagatgtggaccctggaggggacctggccaccgtc
aacagtcagctcaagaagctacagtccatggagtcgcaggtagaggaatggtaccgcgag
gtgggagagctacaggcccagactgcggcgcttccgctggaacccgcgagcaaggagctg
gtgggcgagcggcagaacgcggtgggcgagcgcctggtgcgcctgctcgagccgctgcag
gagcgccgccgcttgctgctggcctccaaggagttgcaccaggtggcgcacgacctggac
gacgagctggcatgggttcaggagcggctgccactggccatgcagacagagcgaggcgac
ggcttacaggcggtccagcagcacatcaaaaagaaccagggcctgcggcgggagatccag
gcacacgggccgcgcctggaggaggtgctggagcgcgcgagcgctctggcgtcgctgcgc
agcccggaggcagaggccgtgcgccggggccttgagcagctgcagagtgcttgggctgga
ctgcgggaggcggccgagcggcggcagcaggcgctggacgccgccttccaggtggagcag
tactacttcgatgtggcagaggtggaggcgtggctcggcgagcaggagctgctcatgatg
agtgaggacaagggcaaggatgaacagagcactctgcagctgctgaagaaacacctgcag
ctggagcaaggcgtggagaactacgaggaaagcatcgcgcaactgtcgcgccagtgccgg
gcgctgctggagatgggacacccggacagcgagcagatcagccggcggcagtctcaggtg
gaccgcctgtatgtggcactcaaggagctgggcgaggagcgccgggtagccctggagcag
cagtactggctgtaccagctcagccgccaggtgggcgagcttgagcactggatcgccgag
aaggaggtggtagctggctcccccgaactcggccaggactttgagcacgtctcggtgctg
caggaaaaattctcagagttcgccaatgagacaggcacggcagggcgggagcggctggca
gctgtgaaccagatggtggatgagctgatcgagtgtggccatacagcagcggccaccatg
gccgagtggaaggacgggctgaacgaggcctgggctgagctgctggagctcatgggcaca
agggcccagctgctggccgcctctcgggagctgcataagttcttcagtgatgccagagag
cttcagggacagattgaggagaagcggaggcggctaccccgcctgaccaccccgcctgag
ccgagacccagcgccagctccatgcagcggaccctgagagcctttgagcatgacttgcag
ctcctcgtgtcccaggtgcggcagcttcaggagggggcggcccagctgcggacggtgtat
gcaggtgaacacgccgaggccatcgctagccgggagcaggaggtgctgcagggttggaaa
gagctgctgtccgcctgtgaggatgcccgtctgcacgtcagctccacagcagatgccctg
cgcttccacagccaagtccgcgacctgctctcctggatggatggcatcgccagccagatt
ggggcggccgacaagcccagggatgtgtcatcagtggaggtgctcatcaactaccaccag
ggcctgaagactgagctggaggcgcgggtgcctgagctgactgcctgtcaggagctgggg
cgatctctgctgctcaacaaaagtgccatggctgacgagatccaggcacagctggacaag
ctgggaaccaggaaggaggaggtgtcggaaaagtgggaccgccattgggagtggctgcag
cagatgctggaggtacaccagttcgcccaggaggcagtggtggctgatgcctggctcaca
gcccaggagccaattctccagagccgggagctgggcagcagcgtggatgaggtggagcag
cttatccggcgacacgaggccttccgaaaagcggctgcagcctgggaagagagattcagc
tctctgcggcgcctgaccacgatcgagaaaatcaaggcggaacagagcaagcagccgccc
accccgctgctggggcgcaagttctttggggaccccacggaactggcggccaaggcggcg
cccctgctgcggccagggggttatgaaaggggcttggagcccctggcccgccgggcctcg
gacacgctgtcggccgaggtgcggacccgggtggggtacgtgcgccaggagctcaagcct
gagcgcctccagccgcgcattgaccggctgccggagatcccggggagggtggagcccgca
gtcccaccggccgcaccagaggacgcggcggagacccccgcgacccccgtggcccctgtg
gtggcggagcaggtccggccacggccggagcgccaggagtcagctgatcgcgcggaggag
ctgcccaggaggcggcggcccgagaggcaagagtcggttgatcaatccgaggaggctgcg
cggaggcggcggccggagcggcaggagtcagcggagcacgaggcggcacacagccttacc
ctgggccgctacgagcagatggagcgacggcgcgagcggcgtgagcggcgcttggagcgg
caggagtccagcgaacaggagatgcccatcagaggagacctggtcaaggggaaggccacc
ctggctgacattgtggaacagctgcaggagaaagaggcaggcccagggctgcctgctggg
ccgtcgctgcctcagccacgcgagcttccccctggccgcctgcccaacgggcttgagccg
cccgagcggacacctcggccggaccggccccgggcgcgggaccggcccaagccgcgacgg
cggccgcggcccagagagggtggtgagggcgggggaagccggcgctcgcgctccgccccg
gcccagggcggctccgcccccgcgcctccgccaccgcccactcacacagtgcagcacgag
ggcttcctactgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccggtcgtgg
gtgagcctatactgtgtgcttagtaagggggaactgggcttctacaaggactccaagggc
ccggcatccgggagcacacacggcggggagcctctgctcagcctgcacaaagccaccagc
gaggtggctagtgactacaagaaaaagaagcatgtcttcaagctccagacccaggatggc
agtgaatttttgctccaggcaaaagatgaggaggagatgaatggctggctggaggctgtg
gctgtctcggtggcggaacacgcagagatcgcccgctggagccagacactacccactact
tcatccacagacgagggcaatcccaagagggaaggcggagaccgcagggccagcgggcgc
aggaagtga
DBGET
integrated database retrieval system
