Callithrix jacchus (white-tufted-ear marmoset): 100396889
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Entry
100396889 CDS
T03264
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjc00535
]
100396889 (NYX)
Proteoglycans [BR:
cjc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
100396889 (NYX)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
100396889
NCBI-ProteinID:
XP_054106983
Ensembl:
ENSCJAG00000009048
LinkDB
All DBs
Position
X:40730378..40754995
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AA seq
479 aa
AA seq
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MKGRGMLVLLLHAVVLGLPSAQAMGACARACPSACACSTMERGCSVRCDRAGLLRVPAEF
PCEAVSIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHN
GDLRYLHARTFVALSRLRRLDLAACRLFSVPERLLAELPALRELSAFDNLFRRVPGALRG
LTNLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRVVHAGAFRDCSVLEHLLLNDN
LLAELPADAFGGLRRLHTLNLGGNALDHVARAWFADLVELELLYLDRNSIAFVEEGAFQN
LSGLLALHLNGNRLTVLAWAAFQPGFFLGRLFLFRNPWCCDCRLEWLRDWMEGSGRVTDV
PCTSPGSVAGLDLSQVAFGRSSDGVCVDPKELNLTTSSPGPSPEPAATTVSRFSSLLSKL
LAPRVPVEEMANTTGGLANASLSDSLSFGGVGGVGRQPGFLLASCLLLSVVQHTAWSST
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagggccgagggatgctggttctgcttctgcatgcggtggtccttggcctgcccagc
gcccaggccatgggggcctgcgcgcgcgcctgcccgtccgcctgcgcctgcagcaccatg
gagcgcggctgctccgtgcgttgcgaccgcgccggcctcctgcgggtgccggccgagttc
ccgtgcgaagcggtctccattgacctggaccggaacggcctgcgcttcctgggcgagcgg
gcctttggcacactgccgtccctgcgccgcctgtcgctgcgccacaacaacctgtccttc
atcacgcccggcgccttcaagggtctgccacgtctggccgagctgcgcctggcgcacaac
ggagatctgcgctacctgcacgcgcgcaccttcgtggcgctcagccgcctgcgccgcctg
gacttggccgcctgccgcctcttcagcgtgcccgagcgcctcctggccgagctgccggcc
ctgcgcgagctctcggcctttgacaacttgttccgccgcgtgccaggcgcgctgcgcggc
ctgaccaacctgacgcacgcgcacctggaacgcggccgcatcgaggcggtcgcctccagc
tcgctgcagggcctgcgtcgcctgcgctcgctcagcctgcaggccaaccgcgtccgcgtc
gtgcacgccggcgccttcagggactgcagcgtcctggagcacctgctgctcaatgacaat
ttgctggctgaactcccggctgatgccttcggcggcctgcggcgcctgcacacgctcaac
ctgggtggcaacgcgctggaccacgtggcgcgcgcctggttcgctgacctggtggagctt
gagctgctctacctagatcgcaacagcatcgccttcgtggaggagggcgccttccagaac
ctctcaggcctccttgccctgcacctcaacggcaaccgcctcaccgtgctcgcctgggcc
gctttccagcctggcttcttcttgggccgcctcttcctcttccgtaacccgtggtgctgc
gactgccgcctggagtggctgcgggactggatggagggctccgggcgtgtcactgacgtg
ccatgcacctccccgggctccgtggcaggtctggacctcagccaggtggccttcgggcgc
tcctccgatggcgtctgtgtggaccccaaggagctgaacctcaccacgtccagtccaggt
ccgtccccagaaccagcggccaccaccgtgagcaggttcagcagcctcctctccaagctg
ctggcccctagggtcccggtggaagagatggccaacaccactggggggctggccaacgcc
tccctgtccgacagcctctccttcggtggggtgggaggagtgggcaggcagcccgggttt
ctcctcgcttcttgtctcctgctcagcgtggtccagcacacagcgtggtccagcacgtag
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