Callithrix jacchus (white-tufted-ear marmoset): 100397060
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Entry
100397060 CDS
T03264
Symbol
NPAS4
Name
(RefSeq) neuronal PAS domain-containing protein 4 isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100397060 (NPAS4)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100397060 (NPAS4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
100397060
NCBI-ProteinID:
XP_002755607
Ensembl:
ENSCJAG00000001482
UniProt:
F6WSP4
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All DBs
Position
11:120259097..120265587
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AA seq
800 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFSGGT
PLAGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIY
DIIDPADHLTVRQQLTLPSALDTDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGA
YWAGNPVFTAFCAPLEPRPRPGPGPGPASLFLAMFQSRHAKDLALLDISESVLIYLGFER
SELLCKSWYGLLHPEDLAHASAQHYRLLAESGDIQAEMVVRLQAKTGGWAWIYCLLYSEG
PEGPITANNYPISDMEAWSLRQQLNSEDNQAAYVLGTPTMLPSFPENILSQEQCSSTNPL
FTAALGAPRSTSFPSAPELSVVSASEELPRPSKELDFSYLAFPSGPEPSLQAELSKDLVC
TPPYTPHQPGGCAFLFSLHEPFQTHLPAPSSTLQEQLTPSTATFSDQLTPSSATFPDPLT
SPLQGQLTETSARSYEDQLTPCTSTFPDQLLPSTATFPEPVGSPAHEQLTPPSTAFQAHL
DSPSQTFPEQLSPNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSVDV
PLVPEGLLTPEASPVKQSFFHYSEKEQNEIDRLIQQISQLAQGMDRPFSAEAGTGGLEPL
GGLEPLDSNLSLSGAGPPVLSLDLKPWKCQELDFLADPDNMFLEETPVEDIFMDLSTPDP
NEEWGSGDPEAEGPGGAPSPCNNLSPEDHSFLEDLATYETAFETGVSAFPYDGFTDELHQ
LQSQVQDSFHEDGSGGEPTF
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctccaccaagggcgcctccaaggcgcgccgggaccagatcaacgccgagatc
cggaacctcaaggagctgctgccgctggccgaagcggacaaggtccggctgtcctacctg
cacatcatgagcctcgcctgcatctacactcgcaagggcgtcttcttctctggaggcact
cctctggcaggccccacggggcttctctcagctcaggagcttgaggacatcgtagcggca
ctacctggctttctgcttgtgttcacagccgaggggaagttgctctacctgtctgagagt
gtgagcgagcatctgggccactccatggtggacctagttgcccagggtgacagcatctac
gacatcattgacccagctgaccacctcactgtgcgccagcaactcactctgccctctgcc
ctggacactgatcgcctcttccgctgccgcttcaacacctccaagtccctcaggcgccag
agtgcaggcaacaaactagtgcttattcgaggccgattccatgctcacccacctggggcc
tactgggcaggaaaccccgtgttcacagctttctgtgccccactggagccgagaccccgc
cctggccctggccctggtcctgcctcactcttcctggccatgttccagagccgtcatgct
aaagacctggccctactggacatctctgagagtgtcctaatctacctgggctttgagcgc
agtgaactgctttgtaaatcatggtatggactgctgcaccccgaggacctggcccacgct
tctgctcaacactaccgcctgttggctgagagtggagatattcaggcagagatggtggtg
agactacaggccaagactggaggctgggcatggatttactgcctgctatactcagaaggt
ccagagggccccattactgccaataactacccaatcagtgacatggaagcctggagtctc
cgccagcagttgaactctgaagacaaccaggcagcttatgtcctgggcactccgaccatg
ctgccctcattccctgagaacattctctcccaggaacagtgctccagcactaacccactc
ttcaccgcagccttgggggctcccagaagcactagcttccccagtgctcctgaactgagt
gttgtctccgcatcagaagagcttccccgaccctccaaagaactggacttcagttacttg
gcattcccttctgggcctgagccttctctccaagcagaactgagcaaggatctcgtatgc
actccaccctacacgccccaccagccaggaggctgtgccttcctcttcagcctccatgag
cccttccagacccacttgcccgccccatccagcactcttcaagaacagctgactccaagc
actgcgaccttctctgatcagttgacacccagcagtgcaaccttcccagatccactaact
agcccactgcaaggccagctgactgaaacctcagccagaagctacgaagaccagttgact
ccctgcacctctaccttcccagaccagctgcttcccagcacagccacctttccagagcct
gtgggcagccctgcccatgaacagctgactcctcccagcacagcattccaagcacacctg
gacagccccagccaaacgttcccagagcaactgagccccaatcctaccaagacttacttc
gcccaggagggatgcagttttctctatgagaagttgcccccaagtcctagcagccctggt
aatggggactgcacgctcttggccctagcccagctccggggccccctctctgtggatgtc
cccctggtgcctgaaggcctgctcacacctgaggcctctccagtcaagcagagtttcttc
cactactctgaaaaggaacagaacgagatagaccgtctcattcagcagattagccaattg
gctcaaggcatggacagacccttctcagctgaggctggcactggtggactagagccactt
ggaggactggagcccctggactccaacctgtccctgtcgggggcaggcccccctgtgctc
agcctggacctgaaaccctggaaatgccaggagttggacttcctggctgaccctgataac
atgttcctggaagagacgcccgtggaagacatcttcatggatctctctaccccagacccc
aatgaggaatggggttctggggatcctgaggcagagggcccaggaggggccccatcgcct
tgcaacaacctgtccccagaagaccacagcttcctggaggacctggccacatatgaaacc
gcctttgagacaggtgtctcagcattcccctatgatgggtttactgatgagttgcatcaa
ctccagagccaagttcaagacagcttccatgaagatggaagtggaggggaaccaacgttt
tga
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