Callithrix jacchus (white-tufted-ear marmoset): 100397336
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Entry
100397336 CDS
T03264
Symbol
PLXNB2
Name
(RefSeq) plexin-B2 isoform X1
KO
K06821
plexin B
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100397336 (PLXNB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
TIG_plexin
PSI
PSI_Plexin-B
PSI_PlexinA-B
RasGAP
Peptidase_S64
Motif
Other DBs
NCBI-GeneID:
100397336
NCBI-ProteinID:
XP_035130071
Ensembl:
ENSCJAG00000003197
UniProt:
A0A8J8YFT9
LinkDB
All DBs
Position
1:complement(216367708..216399943)
Genome browser
AA seq
1839 aa
AA seq
DB search
MALQLWALTLLGLLGAGASLRPRKPDFFRSEKELNHLAVDEASGVVYVGAVNTLYQLDAR
LQLEQQVSTGPALDNKKCTPPIESSQCHEAEMTDNVNQLLLLDPPRKRLVECGSLFKGIC
ALRSLSNISERLFYEDSSGEKSFVASNDEGVATVGLVSSTGPGGDRVLFVGKGNGPHDNG
IIVSTRLLDRTDSREAFEAYTDHATYKAGYLSTNTQQFVAAFEDGPYVFFVFNQQDKHPA
RNRTLLARMCRQDPNYYSYLEMDLQCQDPDPKAATFGTCLAASVAAPGSGRVLYAVFSRD
ARSPGGPGAGLCLFPLDEVHDKMEANRNTCYTSTRDVARDIFYKPFHGEIECGGHSPGSS
QNFLCGSEHLPYPLGSRDGLTATAVLQRGGLNLTAVTVTTENNHTVAFLGTSDGRILKVY
LASNGTSSEYDSVLVEINKRVKNDLVLSGDLAVLYAMTQDKVFRFPVQECLSYLTCTQCR
DSQDPYCGWCVVEGRCTRKAECPRAEEASHWLWSRSKSCVAITSAQPQNMSRRAQGEVQL
TVSPLPALSEEDELLCLFGDSSPHPARVEGNTVICNSPNSIPVTPPGQDHVAVTIQLLLR
QGNIFLTSYQYPFYDCRKAMSLEENLPCISCVSNRWTCQWDLRYHECREASPNPEDGIIR
AHMEDSCPQFLDPSPLVIPVNHETDVTFQGKNLDTVKGSSLHVGSDLLKFEEPVRMQESG
TFIFRTPKLSHDANETLPLHLYVKSYSKNIDSKLHVTLYNCSFGRSDCSLCRAAHPTYKC
AWCGGQSRCVYEALCNATSECPPPVITRIHPETGPLGGGIRVTILGSNLGVRAEDIQRIS
VAGRNCTFQPEGYSVSTRIVCVIEAAEVPLTGGVEVDVLGKLGRSPPDVQFTFQQPQPLS
VEPQEGPQAGGTMLTIHGTHLDTGSQEDVRVTLSGIPCKVTKFGAQLQCVTGPQATRGQM
PLEVSYGGSPVPSPGIIFTYRENPVLRAFEPLRSFASGGRSINVTGQGFSLIQRFAMVVI
AEPLQSWQPPREAESLQPMTVVGTDYVLHNDTKVVFLSPAVPEEPEAYNLTALIEMDGHR
ALLRTEAGAFEYVPDPTFENFTGGVKKQVNKLIHARGTNLNKAMTLQEAEAFVGAERCTM
KTLTETDLYCEPPEVQPPPKRRQKRDTTHNLPEFIVKFGSREWVLGRVEYDTRVSDVPLS
LILPLVIVPMVVVIAVSVYCYWRKSQQAEREYEKIKSQLEGLEESVRDRCKKEFTDLMIE
MEDQTNDVHEAGIPVLDYKTYTDRVFFLPSKDGDKDVMITGKLDIPEPRRQVVEQALYQF
SNLLNSKSFLINFIHTLENQREFSARAKVYFASLLTVALHGKLEYYTDIMRTLFLELLEQ
YVVAKNPKLMLRRSETVVERMLSNWMSICLYQHLKDSAGEPLYKLFKAIKHQVEKGPVDA
VQKKAKYTLNDTGLLGDDVEYTPLTVSVIVQDEGADAIQVKVLNCDTISQVKEKIIDQVY
RGQPCSCWPRPDSVVLEWRPGSTAQILSDLDLTSQREGRWKRVNTLMHYNVRDGATLILS
KVGVSQQPEDSQQDLPGERHALLEEENRVWHLVRPAEEVDEGKSKRGSVKEKERTKAITE
IYLTRLLSVKGTLQQFVDNFFHSVLAPGHAVPPAVKYFFDFLDEQADKHSIQDEDTIHIW
KTNSLPLRFWVNILKNPHFIFDVHVHEVVDASLSVIAQTFMDACTRTEHKLSRDSPSNKL
LYAKEISTYKKMVEDYYKGIRQMVQVSDQDMNTHLAEISRAHTDSLNTLVALHQLYQYTQ
KYYDEIINALEEDPAAQKMQLAFRLQQIAAALENKVTDL
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcagctctgggccctgaccctgctgggcctgctgggcgcgggtgccagcctg
cggccccgcaaaccagacttcttccgcagcgagaaagagctgaaccacctggctgtggat
gaggcctcgggcgtggtgtacgtgggggcagtgaacaccctctaccagctggatgccagg
ctgcagctggagcagcaggtgtccacaggcccggccctggacaacaagaagtgcacaccg
cccatcgagtccagccagtgccacgaagcagagatgaccgacaacgtcaaccagctgctg
ctgctcgaccctccccggaagcgcctggtggagtgtggcagcctcttcaagggcatctgc
gccctgcgcagcctgagcaacatctccgagcgcctgttctacgaagacagcagtggcgag
aagtctttcgtggccagcaatgatgagggcgtggccacggtggggcttgtgagctccacc
ggccccggcggtgaccgtgtgctgtttgtgggcaaaggcaacgggccacatgacaacggc
ataatcgtgagcacccggctgctggaccggactgacagcagggaggcgttcgaagcctac
acggaccacgccacctacaaggctggctacctgtccaccaacacgcagcagtttgtggcc
gccttcgaggacggcccctacgttttctttgtgttcaaccagcaggacaagcacccggcc
cggaaccgcacgctgctggcccgcatgtgcagacaggaccccaactactactcctacctg
gagatggacctgcagtgccaggaccccgaccccaaggccgccacctttggcacctgcctg
gccgcctccgtggccgcgcctggctctggcagggtgctgtatgccgtcttcagcagggat
gcccggagccctgggggccccggtgcgggcctctgcctgttcccgctggatgaggtacac
gacaagatggaggccaaccgaaacacctgctacacgagcacccgggatgtagccagggac
atcttctacaagcccttccacggcgagatcgagtgcggcggccactcaccgggctccagt
cagaacttcctgtgtggctcggaacacctgccctaccctctgggcagccgcgacgggctc
acagccacagccgtgctgcagcgtgggggcctgaacctgacggccgtgacggtcaccacg
gagaacaaccacactgttgcttttctgggtacctctgacggccggatcctcaaggtgtac
ctcgcctcaaacggcacctcctccgagtacgactctgtccttgtggagatcaacaagaga
gtcaagaatgacctggtgctgtctggagacctggccgtcctgtacgccatgacccaggac
aaggtattccggttcccggtgcaggagtgcctgagctacctgacctgcacccagtgccgc
gactcgcaggacccgtactgcggctggtgtgtcgtcgagggcagatgcacccggaaggct
gagtgcccacgggccgaggaggccagccactggctgtggagccggagcaagtcctgtgtt
gccatcaccagtgcccagccacagaacatgagccggcgggcccagggggaggtgcagctg
actgtcagcccccttcctgccctgagtgaggaggatgagttgctgtgcctctttggggac
tcgtcaccgcaccccgcccgcgtggagggcaacaccgtcatctgcaactccccaaatagc
atccccgtcacgccgccaggccaggaccatgtggctgtgaccatccagctcctcctcaga
caaggcaacatctttctcacgtcctaccagtaccccttctacgactgccgcaaagccatg
agcctggaagagaacctgccgtgcatctcctgtgtgagcaaccgctggacctgccagtgg
gacctgcgctaccacgagtgccgggaggcatcacccaatcccgaggatggcatcatccgc
gcccacatggaggacagctgcccccagttcctggaccccagccccctggtgatccccgtg
aaccatgagacagacgtgaccttccagggcaagaacctggacactgtgaagggctcctcc
ctgcatgtgggcagtgacctactcaagttcgaggagccagtgaggatgcaggaatcgggg
accttcatctttcggaccccaaagctgtcccacgatgccaatgagacgctgcccctgcat
ctgtatgtcaagtcctacagcaagaatatcgacagcaagcttcacgtgactctctacaac
tgctcctttggccgaagcgactgcagcctgtgccgggccgctcaccccacctacaagtgt
gcgtggtgtgggggtcagagcaggtgcgtgtacgaggccctctgcaacgccacctccgag
tgcccaccacccgtcatcaccaggatccaccctgagacgggccccctgggcgggggcatc
cgtgtcaccatcctggggtccaatttgggtgtccgagcagaggacatccagaggatctct
gtggctggccggaactgcacctttcagccagaaggttactccgtgtccacccggattgtg
tgtgtgatcgaggctgcagaggtgcccttaactgggggtgtcgaggtggatgtcctcggg
aaactcggtcgttcacctcccgacgtccagttcaccttccaacagccccagcctctcagt
gtggagccgcaggagggaccgcaggcgggtggcaccatgctgactatccacggcacccac
ctggacacaggctcccaggaggacgttcgggtgaccctcagcggcatcccgtgtaaagtg
acgaagtttggggcgcagctccagtgtgtcaccggcccccaggcgacacggggccagatg
cccctggaggtctcctacgggggctcccctgtgcccagccccggcatcatcttcacctac
cgtgaaaacccagtactgcgagcctttgagccactgcgaagctttgccagtggtggccga
agcatcaacgtcacgggtcagggcttcagcctgatccagaggttcgccatggtggtcatc
gcagagcccctgcagtcctggcagcctccacgggaggccgaatccctgcagcccatgacg
gtggtgggcacggactacgtgctccacaatgacaccaaggtggtcttcctgtctccggct
gtccccgaggagcccgaggcctacaacctcacggcgctgatagagatggacgggcaccgt
gcactgctcaggacagaggctggggcctttgagtatgtgcctgaccccacctttgagaac
ttcacaggtggcgtcaagaagcaggtcaacaagcttatccatgcccggggcaccaacctg
aacaaggcaatgacgctgcaggaagccgaggcgtttgtgggtgccgagcgctgcaccatg
aagacgctgacggagaccgacctgtactgcgagcccccggaggtgcagcccccgcccaag
cggcggcagaagcgagacaccacccacaacctgcctgagttcattgtgaagttcggctct
cgagagtgggtgctgggccgtgtggagtacgacacgcgtgtgagtgatgtgccgctcagc
ctcatcctgccgctggtcatcgtgcccatggtggtcgtcattgccgtgtctgtctactgt
tactggaggaagagccagcaggctgagcgtgagtacgagaagatcaagtcccagctggag
ggcctggaggagagcgtgcgggatcgctgcaagaaggaattcacagacctgatgatcgag
atggaggaccagaccaatgacgtgcacgaggccgggatccccgtgctggactacaagacc
tacaccgaccgagtcttcttcctgccctccaaggacggcgacaaggatgtgatgatcacc
ggcaagctggacatccccgagccgaggcggcaggtggtagagcaggccctctaccagttc
tccaacctgctgaacagcaaatccttcctcatcaacttcatccacaccctggaaaaccag
cgggagttctcggcccgagccaaggtctacttcgcgtccctgctgacggtggcactgcat
gggaagctggagtactacacggatatcatgcgcacgctcttcctggagctcctggagcag
tatgtggttgccaagaaccccaagctgatgctgcgcaggtctgagacggtggtggagagg
atgttgtctaactggatgtccatctgcctgtaccagcacctcaaggacagtgccggcgag
cccctgtacaagctcttcaaggccatcaaacatcaggtggaaaagggccccgtggacgcg
gtgcagaagaaggccaagtataccctcaatgacacggggctgctgggggacgacgtggag
tacacacctctgacggtgagtgtgatcgtgcaggacgagggagccgacgccatccaggtc
aaggtcctcaactgtgacaccatctcccaggtcaaggagaagatcattgaccaggtgtac
cgtgggcagccttgctcctgctggcccaggccagacagcgtggtcctcgagtggcgtcca
ggctccacagcccagatcctgtcggacctggacctgacgtcacagcgggagggccggtgg
aagcgagtcaacaccctcatgcactataatgtccgggacggagccaccctcatcctgtcc
aaggtgggggtctcccagcagccagaggacagccagcaggacctgcctggggagcgccat
gccctgctggaggaggagaaccgggtgtggcacctggttcggccggccgaagaggtggac
gagggcaaatccaagcggggcagcgtgaaggagaaggagcggactaaagccattactgag
atctacctgacaaggctgctctccgtcaagggcacgctgcagcagtttgtggacaacttc
tttcacagcgtgctggcccctgggcacgccgtgccgcccgcggtcaagtacttcttcgac
ttcctggacgagcaggcggacaagcacagcatccaggacgaggacaccatccacatctgg
aagaccaacagtttaccgctccggttctgggtgaacatcctcaagaacccccacttcatc
tttgatgtgcacgtccacgaggtggtggatgcctcgctgtcagtcattgcacagaccttc
atggacgcctgcacacgcacggagcacaagctgagccgcgactctcccagcaacaagctg
ctatatgccaaggagatctctacctacaagaagatggtggaggattactacaagggtatc
cggcagatggtgcaggtcagtgaccaggacatgaacacacacctggcagagatttcccgg
gcacacacagactccctgaacaccctcgtggcactgcaccagctctaccagtacacacag
aagtactatgatgagatcatcaatgccttggaggaggaccctgccgcccagaagatgcag
ctggccttccgcctgcagcagattgcggctgcactggagaacaaggtcactgacctctga
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