Callithrix jacchus (white-tufted-ear marmoset): 100397426
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Entry
100397426 CDS
T03264
Symbol
AQR
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100397426 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100397426 (AQR)
Spliceosome [BR:
cjc03041
]
Complex B
Other components
Prp19-related factors
100397426 (AQR)
Complex C
100397426 (AQR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
SLFN-g3_helicase
DEAD
Parvo_NS1
UvrD_C_2
AAA_16
AAA
DnaB_C
PhoH
DUF4088
NB-ARC
AAA_22
Motif
Other DBs
NCBI-GeneID:
100397426
NCBI-ProteinID:
XP_009003848
Ensembl:
ENSCJAG00000021021
UniProt:
U3EN21
LinkDB
All DBs
Position
10:47706466..47840956
Genome browser
AA seq
1492 aa
AA seq
DB search
MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEEIYEKEIVKSRFA
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWEIFKKKPDHFP
FFFKHILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQA
ARLELELKKTPKLRKFWNLIKKNDEKMDPEARKQAYQERRFLSQLIQKFISVLKSVPLSE
PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQ
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFTELYDFALSNVAEVD
TRESLVKFFGPLSSNTLHQVASYLCLLPTLPKNEETSFDKEFLLELLVSRHERRISQIQQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT
INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM
LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRK
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLS
IEHLKASFPGHNVKVTVEDPALQIPPFRITFPVRSGKGKKRKDADVEDEDTEEAKTLIVE
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSALPD
VTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
LGEAEYVVALFMYMCLLGYPADRISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
SQLTARPLHLHIIPTEPFPTTRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYH
QTLLQLPPAMVEEGEEVQNQETELEAEEEAMTVQADIIPSLTDTSCSQETPAFQTDTTSN
RTETTSSETGASSNPEAISALSETTTTVAGAVPALAEANMPQDATSASAETK
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacctgcgcagcccaagaagatcgtggcccctacggtgtcccagatcaacgcg
gagttcgtgacccagttagcatgtaaatactgggctcctcacatcaagaagaaatcacct
tttgatataaaggttattgaagagatatatgaaaaagagattgtcaaatcaaggtttgct
attaggaagataatgctgttggaatttagccagtatcttgaaaattatctctggatgaat
tattctcctgaggtatccagcaaggcttatttaatgtcaatctgctgtatggtgaatgag
aagttcagagaaaacgtgcctgcatgggagatttttaagaagaaaccggaccatttccca
ttctttttcaaacacatcttgaaggcagcattagctgaaaccgatggtgaattttcactt
catgaacagacagtcctactactttttcttgatcactgcttcaatagtttggaagtagac
ttgatacggagtcaggtacagcagcttatctccctcccaatgtggatgggcttacaggct
gcacgattggaattagaattaaaaaagacacctaagctaagaaaattttggaacttgatt
aaaaagaatgatgaaaagatggatccagaagcaagaaaacaggcctatcaagagaggaga
tttctttcacaactcatccagaagtttatttctgtgctgaaatcagtcccactttctgaa
cctgtcactatggacaaagttcattactgtgaaagattcattgaacttatgattgatcta
gaggccctcctacccacaaggcgctggtttaatactatcctggatgactcccaccttctg
gttcactgttacctttccaatcttgttcgaagagaagaggatggccatcttttttcccag
cttttggacatgcttaaattctatactggttttgaaattaatgaccaaactggaaatgct
ctgacggagaatgagatgaccacaattcactatgatagaattacttctctacagagagct
gcttttgcacatttcactgaactctatgattttgccctctcaaatgtggcagaagtagat
actcgggaatccttggtcaagttttttggacctcttagttcaaacacactccatcaggtg
gcatcatacctctgcttgttgccaactcttcctaaaaatgaagaaacatcttttgataaa
gaatttcttctagaattgctggtatctcgtcatgaacgtcgaatttctcagattcagcag
ttgaaccagatgcctttgtatccgactgagaaaattatatgggatgaaaatattgttccg
actgagtactattctggagaaggttgtctagctcttcccaaattgaatttgcagtttttg
actcttcacgactacctgctaaggaactttaacctcttccgcttagagtcaacttatgaa
attcggcaggacatcgaagatagtgtcagcagaatgaagccatggcagtctgaatacggc
ggtgtagtatttggtggctgggcgagaatggcccagccaatcgtggctttcactgtagtt
gaagttgccaaacccaacataggtgaaaactggccaacccgagttcgtgcagatgttacc
ataaatctgaatgtcagagatcacatcaaagatgaatgggaaggtcttcgtaagcatgat
gtatgctttttaattactgtacgtcccacaaaaccttatggcactaagtttgaccgaagg
agaccttttattgagcaggttggcctggtttatgtcagaggctgtgaaattcagggcatg
ctggatgataaaggacgtgtcattgaagatggacctgaacccagacccaatcttagagga
gagtcaaggacatttagagtgtttttggatccaaaccaatatcaacaagatatgaccaat
actatacaaaatggagcagaggatgtgtatgaaacttttaatataataatgagaagaaaa
ccaaaggaaaataactttaaggctgtgctggaaactattcggaacctgatgaatactgat
tgtgtggtacctgactggctgcatgatatcattttaggttatggggacccaagtagcgca
cattactcaaaaatgcccaatcagattgccacccttgatttcaatgatacatttctctcc
attgagcatttaaaagccagcttccctggtcataacgttaaagtaactgtggaagaccct
gctctacaaataccccctttcaggataacttttccagtaagaagtggaaaagggaagaaa
aggaaagatgcggatgtggaagatgaagacactgaggaggcaaaaaccttaattgttgag
ccccatgttattcctaataggggtccttatccttacaatcaacccaaacgtaatacgatt
cagttcactcatacacagatagaagccatccgtgctggaatgcagcctgggctgactatg
gttgtggggccacctggtacagggaaaacagatgtggccgttcagatcatatccaatatc
taccacaatttcccagaacagaggactctaattgttactcattccaatcaggccctaaac
cagttgtttgagaaaatcatggcattagacattgatgagcgccacctactgcgtcttggt
catggagaagaagagctggagacagaaaaagatttcagcaggtatggaagagttaattat
gtcctggctagaagaatagaacttttagaagaagtgaaacgattgcaaaagagtctaggg
gttccaggagatgcctcatatacctgtgaaactgccggttatttcttcttataccaggta
atgtctcgttgggaagagtatatcagcaaagtgaaaaataaaggtagtgccttgccagat
gttacagaagtctccactttcttccctttccatgagtactttgcaaatgctcctcaaccc
atttttaaaggaagatcttatgaggaagacatggaaattgctgaaggatgttttaggcat
attaagaaaatctttactcagcttgaggaattcagagcctctgaactgcttcgaagtgga
ctggacagatctaaataccttttagtgaaagaagccaaaattattgctatgacctgtact
catgctgccttaaaacgacatgacttggtcaagttaggtttcaagtatgacaacatttta
atggaagaagctgctcagattctggagatagaaacttttatccctcttcttctgcagaat
cctcaggatggatttagccgactgaaacgatggattatgattggtgatcatcaccagtta
cctccagttattaagaacatggcctttcaaaagtactcaaacatggagcagtctctcttc
actcgctttgtccgcgttggagttccgactgtggaccttgatgctcaagggagagccaga
gcaagcttatgcaacctctacaactggcgatacaagaatctgggaaacttaccccatgtg
cagctcttgccagagtttagtacagcaaatgctggcttactgtatgacttccagctcatt
aatgtagaagattttcaaggagtaggagaatctgaacctaatccttacttctatcagaat
cttggagaggcagaatatgtagtagcactttttatgtacatgtgtttacttggttaccct
gctgacagaatcagtattctaacaacatacaatggccaaaagcatcttattcgagacatc
atcaatagacgatgtggaaacaatccgttgattggaagaccaaacaaggtaacaactgtt
gatagatttcaaggtcaacagaatgattatattcttctttctctggtacgaaccagggca
gtgggtcatctgagggatgtccgtcgcttggtagtggccatgtctagagctagacttgga
ctttacatctttgccagagtatccctcttccaaaactgttttgaactgactccagctttc
agtcagctcacggctcgcccgcttcatttgcatataattccaacagaacctttcccaacc
actagaaagaacggagagagaccatctcatgaagtacaaataataaaaaatatgccccag
atggcaaattttgtatacaacatgtacatgcatttgatacagactacacatcattatcat
cagactctattgcaactaccacctgctatggtagaagaaggtgaggaagttcaaaatcag
gaaacagaattggaagcagaagaagaggccatgactgttcaagctgacatcatacccagt
ctgacagacaccagctgcagtcaagaaactccagcctttcaaactgataccacttctaat
cggactgagaccacctccagtgagacaggagccagttccaatccagaagccatatctgct
ttatctgagactaccactactgtggcaggagctgtacctgcactggcagaggctaacatg
cctcaggatgccacatctgcctcagcagagaccaagtag
DBGET
integrated database retrieval system
