Callithrix jacchus (white-tufted-ear marmoset): 100397849
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Entry
100397849 CDS
T03264
Symbol
FANCA
Name
(RefSeq) Fanconi anemia group A protein isoform X1
KO
K10888
fanconi anemia group A protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100397849 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100397849 (FANCA)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100397849 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_CTD
FANCA_arcN
FANCA_helical
Motif
Other DBs
NCBI-GeneID:
100397849
NCBI-ProteinID:
XP_035137539
Ensembl:
ENSCJAG00000010686
LinkDB
All DBs
Position
20:complement(43999487..44081007)
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AA seq
1455 aa
AA seq
DB search
MSDSRVPNSSSGQGSGGRRRSWAELLAGRVKRQKYNPERAQKLKESAVHLLRSRQDLSAL
LLEVEGVQCKKLCLSNLIDCGSSEAHANHSSSFIGSALQDQASRLGVPVGILSATMVASG
VGQICVAPVDPSHPVLLTVEQRKKLSSLLEIAQYLLAHNMFSRLSFCQELWKIQNSLLLE
AVWHLHVQSIVSLQELLESHPDMRAVGAWLFRNLCCLCEQIEASCQHDDVARAMLSDFVQ
MFVLRGFQKNSDLRRTVEPEKVSQVAVDVLQRMLIFALEALAAGVQEESSTHKTLRCWFS
VFSGHTLGSVISTDSQKRFFGQTLTQILTHSPVLKASDAVQMQREWSFARTHPLLTALYR
RLFVMLSAEELVGHLQQVLETQEVNWQRVLSFVSALVVCVPEAQQLLKDWVAHLMAQAFE
SCQMDNMVTAFLVVRQAALEGPSAFQSYADWFKASFGSARGSHGCSKKALVFLFKFLSDL
VPFESPRYLQVHILHPPLVPSRYRSLLTDYISLAKTRLADLKVSIENMGLYEDLSSAGDI
AEPHSQALQDVEKAIMVFEHTGKIPVTVMEASIFRRPYYMSHFLPALLTPRVLPKVPDSR
VAFIESLKSADKIPLSLYSAYCQACTAAGAKPEDATLGVRADPSCAEEPLGQLTAALEEL
RASMTNPSQHDVISAQVAVISERLRDALGHSEDDISVEIAKIQLSIDAPRLEPREHTAVD
LLLTSFCQNLMTASSVAPPERQGPWATLFVRTMCGRVLPAVLTRLCQLLCHQGPSLSAPH
ILGLGALAVHLGESRSVLPEVDVGPPAATVGLPVPELFKSLLTCRTRDSLLFCLKFCVAA
ISYSLCKFPSQSLGILCSCLSSGLIKKFQFLVLRLFPEARQPLSQEDTASLSWRPLYLPS
ADWHRAALSLWTHRTFQELLKGEDAQLTYQDWLHLELEIGPEADVLSDTERQDFQQWAIH
ERFLPEPSASGGCDGDLEAACTILVNTLLDFHQSSRSYGRSENSDLFFGGHRGNECIISR
LQEMAADLELQQDPSASPGHSPSKGHFLYGIFHRRLQGLISGWGVAASLQRQRELLMYKR
ILLRLPSSVLCGSSFQAQQPITARCEQFFHLVNSEMRNICSHRGALTQDITAHFFRGLLN
ASLRSRDPSLMVDLMLAECQTKCPLILTSALLWWPSLEPVLLCQWRRRCQSPLPRELQRL
QEGRQFASDFLSPDATPQAPNPAWLSAAALYFAIQQVGEENVRTQLKKLDCEREELLVFL
FFFSLMGLLSSHLTPNSTLGPLKALEVCAAVLECLEKRKISWLALFQLAESDTRLGCLLL
RVAPDQHTRLLPFAFYSLLSNFHEDAAMREEAFLCVAVDMYLKLVQLFVAGDTSTVSPPA
GRSLELKGQGDPVDLITKARLFLLQLIPRCPKKNFSHVTKLLADRADCDPEVSTALRSRQ
QAAPDTDLCQEPRLF
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcgcgggtcccgaactcctcgtcaggccagggctcaggcggccgccggagg
tcctgggccgagctgctggctggaagggtcaagaggcagaaatacaatcctgagagggca
cagaaattaaaggaatcagctgtgcacctcctgagaagccgccaggacctgagtgccctg
ttgctcgaggtagaaggtgtacagtgtaaaaaattgtgtctcagcaacttgatcgactgt
ggcagttctgaggcccatgctaatcattctagttcatttataggctctgctttgcaggat
caggcctcacgactgggggttcctgtgggtattctctcagccacgatggttgcctctggt
gtgggacagatctgtgtggctccagttgatcccagccaccctgtgctgctgaccgtggag
cagagaaagaagctgtcttccctgttagagatcgctcagtatttattggcacacaatatg
ttctcccgtctttccttttgtcaagaattgtggaaaatacagaattctttgttgcttgaa
gcagtgtggcatcttcatgtgcaaagcattgtgagcctgcaggagttgctggaaagccat
cccgacatgcgtgctgtgggagcgtggctatttaggaacctgtgctgcctctgtgaacag
atagaagcatcctgccagcatgacgatgtcgccagggccatgctttctgattttgtgcaa
atgtttgttttgaggggatttcagaaaaactcagatctgagaagaactgtggagcctgaa
aaagtgtcccaggtcgcagttgatgtgctgcagagaatgctgatttttgcacttgaggct
ttagctgctggagtacaggaggagtcctccacccacaagaccttgaggtgctggttcagc
gtgttcagcggacacacgcttggcagtgtaatttccacagattctcagaagaggtttttc
ggtcaaaccctgactcagatactcacccacagccccgtgctgaaagcttctgatgctgtt
cagatgcagagagagtggagctttgcgcggacgcacccgctgcttactgcattgtaccgc
aggctctttgtgatgctgagtgcagaggagttggttggtcatttgcagcaagttctggaa
acgcaggaggttaactggcagcgagtgctctcatttgtgtctgcactggtcgtctgcgtc
ccagaagcacagcagctcctcaaagactgggtggcgcatttgatggcccaggcattcgag
agctgccagatggacaacatggtcactgcgtttctggtcgtgcgccaggcagcactggag
ggcccctctgcgttccagtcatatgcagactggttcaaggcctcctttgggagtgcgcga
ggctcccatggctgcagcaagaaggctctggttttcctcttcaagttcttgtcagacctt
gtgccttttgagtccccccggtacctgcaggtgcacattctccacccacccctggttccc
agcaggtaccgctccctcctcacagactacatctcattggccaagacgcggctggctgac
ctcaaggtttctatagaaaacatgggactctacgaggatttgtcatcagctggggacatt
gctgagccccacagccaggctcttcaggatgttgaaaaggccatcatggtatttgaacat
acagggaaaatcccagtcaccgtcatggaggccagcatattcaggaggccttactacatg
tcccacttcctccctgcgctgctcacaccgcgagtgctcccaaaagtccctgactcccgt
gtggcttttatagagtctctgaagagcgcagataaaatccccctatctctgtactccgca
tactgccaggcctgcactgctgctggagcgaagccggaagatgcaaccctgggagtaagg
gcagaccccagctgtgctgaggagcccctgggacagctcacggctgcactggaagagctg
agagcatccatgacaaaccctagccaacatgacgttatctcggcgcaggtggcagtgatt
tctgaaagactgagggatgccctgggccacagtgaggatgacatcagcgttgagatagca
aagattcagctcagcatcgacgcaccaagactggagccacgggaacacacggccgtggac
ctcctgctgacgtctttctgtcagaacctgatgacagcgtccagtgtggctcctccagag
aggcaggggccctgggccaccctcttcgtgaggaccatgtgtggacgcgtgctccctgca
gtgctcacccggctctgccagctgctttgtcaccagggcccgagcctgagtgcgccgcat
attctgggcttgggtgccctggccgtgcacctgggtgagtccaggtctgtgctcccagag
gtggatgtgggtcctcctgctgccactgtgggccttcctgtgcccgagctcttcaaaagc
ctcctgacctgtaggaccagggattccttgcttttctgcctgaagttttgtgtagcagcc
atttcttactctctctgcaaatttccttcccagtcacttggtattttgtgcagctgctta
tcttcaggccttattaaaaagtttcagttccttgtgctcagattattcccagaggcccga
cagcctctttctcaggaggacacagccagcctttcctggagacccttgtacctgccttct
gcagactggcacagagctgccctctctctctggacacacagaacgttccaggagctgtta
aagggggaagatgctcagttaacttaccaagactggctacacctggaactggaaattgga
cctgaagctgatgttctttcagatacagaaagacaggacttccagcagtgggccatccat
gagcgctttctccctgagccctccgcctcagggggctgtgacggagacctggaggctgca
tgtaccattcttgtcaacacgctgttggatttccaccaaagctcaaggagttacggccgc
tcagagaattctgatttgttcttcggtggacacagaggaaatgagtgtattatttccaga
ttgcaggagatggcagctgacctggagctgcagcaagacccctcggcgtcccctggccac
tcaccttccaaggggcatttcctgtatgggattttccacagacggctccagggtctgatc
agcgggtggggcgtggctgccagccttcagagacagagggagcttctcatgtacaaaagg
atcctcctccgcctgccttcatctgtcctctgcggcagcagcttccaggcccagcagccc
atcactgccagatgcgagcagttcttccacctggtcaactcggagatgagaaacatctgc
tcccacagaggtgccctgacgcaggacatcactgcccacttcttcagggggctcttgaat
gccagtctgcggagcagagacccttctctgatggtcgacttgatgctggccgagtgccag
acgaaatgccccttaattttgacctctgctctgttgtggtggccaagcctggagcctgtg
ctgctctgccagtggaggagacgctgccagagcccactgccccgggagctgcagaggctg
caagaaggccggcagtttgccagcgatttcctctctcctgatgccaccccccaggcaccg
aacccagcctggctctcagctgctgcactgtactttgcaattcaacaagtcggggaagaa
aacgtcaggacccagctcaaaaagttggactgcgagagagaggagctattggttttcctt
ttcttcttctccttgatgggcctgctctcgtcacatctgaccccaaatagcaccctgggc
ccactaaaagctttagaagtttgtgctgcagtcctcgagtgtttagagaagaggaagata
tcctggctggcactctttcagttggcagagagtgacaccaggctggggtgcctcctcctc
cgcgtggccccggatcagcacaccaggctgctgcctttcgccttctacagtcttctctcc
aacttccacgaagatgcagccatgagggaagaggccttcctgtgtgttgctgtcgacatg
tacctgaagctggtccaactcttcgtggctggggatacgagcacagtttcacctccagct
ggcagaagcctggagctcaagggtcagggcgaccctgttgacctgataacaaaagctcgc
ctttttctgctgcagttgatacctcggtgcccaaaaaagaacttctcacatgtaacaaag
ctgctggctgatcgtgcggactgcgacccagaagtgagcactgccctccggagcaggcag
caggccgcccctgacaccgacctgtgccaggagcctcgtctcttctga
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integrated database retrieval system
