Callithrix jacchus (white-tufted-ear marmoset): 100398001
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Entry
100398001 CDS
T03264
Symbol
ALS2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05014
Amyotrophic lateral sclerosis
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100398001 (ALS2)
05022 Pathways of neurodegeneration - multiple diseases
100398001 (ALS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100398001 (ALS2)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100398001 (ALS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
MORN
RCC1_2
VPS9
PH_alsin
Alsin_RLD
RhoGEF
HA_Alsin
DH_ALS2
PH
CCDC47
Motif
Other DBs
NCBI-GeneID:
100398001
NCBI-ProteinID:
XP_002749680
Ensembl:
ENSCJAG00000004769
UniProt:
U3ET15
LinkDB
All DBs
Position
6:complement(119361550..119458890)
Genome browser
AA seq
1657 aa
AA seq
DB search
MDSKKRSSTEAEGSKERGLVHIWQAGSFPITPERLPGWGGKTVLQAALGMKHGVLLTEDG
EVYSFGTLPWRSGPVEICPSSPILENALVGQYVVTVATGSFHSGAVTDSGVAYMWGENSA
GQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQL
GLITTVFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGVTLSESQAENHASTALSPSTETLDRQKEVFENTLVANDQS
VATELNAVSAQTTSDNAVSSQQNIMGTTEISSARNIPSYPDTQAVNEYLRKLSDHSVRED
SDHGEKPMPSQPLVEEAFPNLHSPPTTSTSALNSLVVSCASAVGVRVAATYEAGALSLKK
VMNFYSTTPCETGAQAGSSAVGPEGLKDSREEQVKQESMQGKKSSSLVDIREEETEGGSR
RLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLG
HGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV
PRLAKVSSENGVWSIAAGQDYSLFLVDTEDFQPGLYYSGRQDPTEGDNLPENHSGSKTPV
LLSCSKLGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKLSDIKSQILRPL
LSLENLGTTATVQLLQEVASRFSKLCYLIGQHGASLSSFLHGIKEARSLVILKHASLFLD
SYTEYCTSITNFLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLP
IRRLHNYAKVLLKLATCFEVASPEYQKLQDSSSCYECLALHLGRKRKEAEYTLGFWKTFP
GKMTDSLRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLW
AEPLSEEAGGVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGMSDLPPYGSG
SSVQRQEPPISRSAKYTFYKDPRLKDATYDGRWLSGKPHGRGVLKWPDGKMYSGMFRNGL
EDGYGEYRIPNKAMNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRS
GKLTSSSPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEG
NFHLNKMMGNGILLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKIT
GTYFKPSLYESDKDRPKVFRKLGNLAVPADEKWKAVFDECWRQLGCEGPGQGEVWKAWDN
IAVALTTNRRQHRDSPEILSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPL
HPLGRLVETLVAVYRMTYVGVGANRRLLQEAVKEIKSYLKRIFQLVRFLFPELPEEGSTI
PLSAPLPTERKSFCTGKSDSRSESPEPGYVVTSSGLLLPVLLPRLYPPLFMLYALDNDRE
EDIYWECVLRLNKQPDIALLGFLGVQRKFWPATLSTLGESKKVLPTTKDACFASAVECLQ
QISTTFTPSDKLKVIHQAFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSE
VHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaagagaagctcaacagaggcagaaggatccaaagaaagaggcctggtc
catatctggcaggcaggatcctttcccataacaccagagagattgccaggctggggagga
aagactgttttgcaggcagcccttggcatgaaacatggagttcttctgactgaagatggt
gaggtctacagctttgggacccttccctggagaagtggaccagtggagatttgtccaagt
agccccattctagaaaatgccctggttgggcaatatgttgttactgtggcaacaggaagc
ttccatagtggagcagtgacagacagtggtgttgcgtacatgtggggagagaattctgcc
gggcagtgtgcagtagccaatcagcagtatgtgccggagccgaaccctgtcagcatcgct
gattctgaggccagccctttgttagcagtcaggattttgcagttggcatgtggtgaagag
cacactctggcattgtcaataagcagagagatctgggcatggggtactggttgtcagttg
ggtctcattaccactgtcttcccagtgacaaagccgcaaaaggtagaacatcttgctggg
cgagtggtgcttcaggttgcctgtggtgctttccacagcttagcccttgtacaatgcctg
ccttcccaggatctgaaaccagtcccagaacgatgcaaccagtgcagccagctcttgatt
actatgactgacaaagaagaccatgtgattatatctgacagtcattgttgcccattaggt
gtgacattgtccgaatctcaggcagaaaaccatgccagcactgctctcagcccctccact
gaaacccttgacaggcagaaagaagtgtttgagaacactcttgtagcaaatgatcagtct
gttgctacagaactgaatgcagtaagtgcccagaccacgagtgacaatgctgtatcctct
caacaaaacatcatgggaacaactgaaatttcttctgccagaaacataccatcataccct
gacacccaggcagtaaatgaatacctgcggaaactgtcagatcattcagtaagagaggac
tcagatcatggtgaaaagccaatgccatctcagccccttgtggaagaagcatttcctaat
ctccacagcccacctaccacaagcacctcagccctgaacagcctggtggtctcttgtgca
tctgctgttggtgtgagagtggctgctacttacgaagctggtgccttgtcactgaagaaa
gttatgaacttttatagtacaaccccttgtgaaactggagctcaggcaggcagtagtgct
gttggcccagaaggtttgaaagatagcagggaagaacaggttaaacaggaatcaatgcaa
ggaaagaaaagttcaagtcttgtggatatcagagaagaagaaacagagggaggcagtcga
agactctccctccctggattgttgtcacaagtttcccccaggctcttaagaaaggctgca
cgggtgaaaacaaggactgtggttctaacccccacatacagtggagaagcagatgcactc
ctgccttctctgagaacagaagtgtggacctgggggaaagggaaggaagggcagctggga
cacggcgatgttctgccaaggcttcaaccgttgtgtgtaaaatgtttggatggcaaagaa
gtaatccatctggaggcaggtggttaccattctcttgcacttactgcaaaatcccaggtt
tactcatggggtagcaatacctttggtcagcttgggcattcggattttccaacaacagtt
cctcgtcttgcaaaggtcagcagtgaaaatggagtctggagcatagctgcaggccaggat
tattccctgtttttagtggatacagaagacttccagcctgggttatattacagtggccga
caggaccctacagaaggtgacaaccttccagagaatcacagtggttctaagactccagta
cttctctcctgtagtaagcttggatatataagcagagtgacagcaggaaaagatagctat
ctagccttggtggataaaaacattatggggtatattgccagtctccacgagttagctact
acagaaagacgattctattcaaaactaagtgatatcaaatctcagattctcaggcctctt
ctcagtttagaaaatttgggcaccacagctacagtccagctgttgcaggaggtggctagc
cgattcagcaagctgtgttacctcattggtcagcatggagcctcattgagcagcttcctt
catgggataaaggaagccaggagtttggtcatcctgaagcatgcaagtctcttcttggat
agttatacagagtattgcacatctattacaaatttcctggttatgggaggattccagctg
cttgctaagcctgccattgatttcctaaataaaaaccaagagctgttgcaagatttatca
gaagtgaatgatgaaaacactcagttgatggaaatactgaatactttgtttttcttgcca
atcagacgacttcataattatgcaaaagttttgctaaagcttgctacttgttttgaagtg
gcatctccagaatatcagaagctgcaggattccagttcatgttatgaatgtcttgctctc
catctcggcaggaaaaggaaggaagcagaatacacactgggcttctggaagaccttcccc
ggaaaaatgacagattccttgaggaagccagagcgtcgactgctgtgtgaaagtagtaac
cgagccctgtctctgcagcatgctgggaggttttctgtgaattggttcattctctttaat
gatgccctggtccatgcccagttctccacgcaccatgttttccctctggccacactgtgg
gcagagccactatctgaagaagctggtggtgtgaatggcttaaagataactacacctgag
gagcagttcactctcatttcatctacaccccaggaaaagacaaagtggctacgagctata
agccaagctgtagatcaggctttgagagggatgtctgatcttcccccttacggaagcggc
agcagtgttcagagacaggaaccacccatttcacgcagtgccaaatatactttctacaag
gatcctcgcctaaaggatgcgacctatgatggacggtggctttcagggaagcctcatggc
agaggggttttgaagtggcctgatggaaagatgtattctggcatgttcaggaatggcttg
gaagatgggtatggagaatacagaatcccaaacaaggcaatgaacaaagaagaccattat
gtaggccattggaaagaaggaaaaatgtgtggtcaaggagtctatagctatgcctctggt
gaagtatttgagggctgttttcaagataatatgcgtcatggtcatggccttctacgaagt
gggaaattgacttcctcttctcctagtatgttcattggccagtgggtaatggataagaaa
gcaggatatggtgtctttgatgatatcactaggggggagaagtatatgggaatgtggcaa
gacgatgtgtgtcaagggaatggtgtggtggttacccagtttggattatactatgaaggc
aactttcaccttaataaaatgatgggaaatgggattttgctttccgaagatgatactatc
tatgagggagaattttcagatgactggactcttagtggaaagggaacactaactatgcca
aatggagactacattgaaggttattttagtggagaatggggatctgggataaaaatcact
ggaacctacttcaaacctagtctgtatgagagtgataaagacagacccaaagttttcagg
aagctaggaaacctggcagtgccagctgatgagaagtggaaagcggtgtttgatgaatgt
tggcgccaactgggctgcgagggcccaggccaaggcgaagtttggaaagcatgggacaat
attgctgtggccttgaccaccaatcggcgccaacacagagacagtccagaaatattaagt
cgttcacagactcagacactagagagtttggaattcattccacagcatgttggtgccttc
tctgtggagaaatatgatgacatcaagaaatatttaataaaggcctgtgacactcccctg
caccccctgggcaggcttgtggagacactggttgcagtgtatagaatgacatacgtgggt
gtaggagccaaccgccggttattgcaagaggctgtaaaggagattaagtcctatcttaag
cgaattttccagctggtgaggttcttatttcctgagcttcctgaagaaggcagcacaatc
cctctctctgctcctctgccaaccgaaaggaagtctttttgcactgggaagtcagattcc
cgctctgaatcaccagagccaggttacgtagtaacaagttctggattattgctgcctgtg
ctgctacctcggctctacccaccactgtttatgctttatgctttggataatgatcgggag
gaagacatttactgggaatgtgttcttcgactaaataagcagccagatattgctctcctg
gggtttcttggggtgcagaggaaattttggccagcaaccttgtcaacccttggagagagt
aaaaaggttttgccaaccacaaaagatgcttgttttgcctcagcagtagaatgtctgcag
cagatcagcacaacatttaccccatcagacaaacttaaggtcatccaccaggcttttgag
gagatctctcagagtgtcctggcatcactccaggaagacttcttgtggtccatggatgac
ttatttcctgttttcttatatgtggtgctacgggccaggattaggaatttaggctctgag
gtacacctcattgaggatctaatggacccctatcttcagcatggggaacagggtataatg
ttcaccactttgaaggcatgttactaccagattcagcgtgagaagcttaactag
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integrated database retrieval system
