Callithrix jacchus (white-tufted-ear marmoset): 100398111
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Entry
100398111 CDS
T03264
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03410
Base excision repair
cjc04140
Autophagy - animal
cjc04217
Necroptosis
cjc04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100398111
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100398111
09143 Cell growth and death
04217 Necroptosis
100398111
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100398111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100398111
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100398111
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjc04147
]
100398111
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
100398111
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100398111
MMR (mismatch excision repair)
Other MMR factors
100398111
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100398111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
Motif
Other DBs
NCBI-GeneID:
100398111
NCBI-ProteinID:
XP_035127166
LinkDB
All DBs
Position
5:99758233..99761982
Genome browser
AA seq
214 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYKKEMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEIWNNTAADDKQHYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEKDEDEEDDDDE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttccaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggataaggcccgttataagaaggaaatgaaaacctatattcct
cctaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcctgttctgctctgagtatcgcccaaaaattaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatatggaataacactgctgcagatgac
aagcagcattatgaaaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagccaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagag
gaagatgaaaaagatgaagatgaagaagatgatgatgatgaataa
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integrated database retrieval system
