Callithrix jacchus (white-tufted-ear marmoset): 100398116
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Entry
100398116 CDS
T03264
Symbol
LAMP2
Name
(RefSeq) LOW QUALITY PROTEIN: lysosome-associated membrane glycoprotein 2
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03272
Virion - Hepatitis viruses
cjc03273
Virion - Lassa virus and SFTS virus
cjc04140
Autophagy - animal
cjc04142
Lysosome
cjc04145
Phagosome
cjc05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100398116 (LAMP2)
03272 Virion - Hepatitis viruses
100398116 (LAMP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100398116 (LAMP2)
04142 Lysosome
100398116 (LAMP2)
04140 Autophagy - animal
100398116 (LAMP2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100398116 (LAMP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100398116 (LAMP2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjc04147
]
100398116 (LAMP2)
04090 CD molecules [BR:
cjc04090
]
100398116 (LAMP2)
Membrane trafficking [BR:
cjc04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100398116 (LAMP2)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
100398116 (LAMP2)
Other autophagy associated proteins
RNautophagy/DNautophagy
100398116 (LAMP2)
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
100398116 (LAMP2)
CD molecules [BR:
cjc04090
]
Proteins
100398116 (LAMP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
100398116
NCBI-ProteinID:
XP_054107002
Ensembl:
ENSCJAG00000002638
LinkDB
All DBs
Position
X:complement(112301887..112336157)
Genome browser
AA seq
414 aa
AA seq
DB search
MLCFRLFPVPGSGLVLVCLVLGALRSYALELTLQDSGKATCLYAKWQMTFRVRYETTNKT
YKTQTISDLGAVTYNGSXCGDDQSGPRIAVQFRSGFSWIANFTKAASTYSIDSISFSYNT
SDNTTFPDAKDKGMHTVYQPLAINIPLNELFRCNSLSTLEDNDVVQHYWDVHVQAFVQNG
TVSKMVSTXKFLCDKDKTSTVVPTVHTTVPSPTTTPTPXENPEAGTYSVNNGNGTCLLAT
MGLQLNITQDKVASVININPNTTHSTGSCQSHTALLRLNSSTIKYLDFVFAVKNENRFYL
KEVNVSMNLVNGSVFSIANNNLSYWDAPLGSSYMCNKEQTVSVSGAFQINTFDLRVQPFN
VIEGKYSTAQECSLDDDTILIPIIVGAGLSGLIIVIVIAYLIGRRKSYAGYQTL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgcttccgcctcttcccggttcctggctcagggcttgttctggtctgcctagtc
ctgggagccttgcggtcttacgcattggaacttactctgcaagattcaggaaaagccact
tgcctttatgcaaaatggcagatgaccttcagagtacgctatgaaactacaaacaaaact
tataaaacccaaaccatttcagaccttggtgctgtgacatataatggaagcnattgtgga
gacgatcagagtggtcccagaatagctgtgcagtttagatctggcttttcctggattgcg
aattttaccaaggcggcatctacttattcaattgacagcatctcattttcctacaacact
agtgataacacaacatttcctgatgctaaagataaaggaatgcatactgtttatcaacct
ctggccatcaacattccattgaatgagctttttagatgcaatagtttatcaactttggaa
gataatgatgttgtccagcactattgggatgttcatgtacaagcttttgtccaaaacggc
acagtgagcaaaatggtgagtacttgaaagttcctgtgtgataaagacaaaacttcgaca
gtggtacccaccgtacacaccactgtgccatctcctactacaacacctactccanaggaa
aacccggaggctggaacctattcagttaataatggcaatggtacctgtctgctggctacc
atggggctgcagctgaacatcactcaggataaggttgcttcagttattaacatcaacccc
aatactactcactccaccggcagctgccagtctcacactgctctacttaggctgaatagc
agcactattaagtatcttgactttgtctttgctgtgaaaaatgaaaaccgattctatctg
aaggaagtgaatgtcagcatgaatttggttaatggctctgttttcagcattgcaaataac
aatctcagctactgggatgcccccctgggaagttcttatatgtgcaacaaagagcagact
gtttcagtgtctggagcatttcagataaatacctttgatctaagggttcagcctttcaat
gtgatagaaggaaagtattctacagcccaagagtgttcgctggatgatgacaccattcta
atcccaattatagttggtgctggtctttcaggcttgattatcgttatagtgattgcttac
ctaattggcagaagaaaaagttatgctggatatcagactctgtaa
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