Callithrix jacchus (white-tufted-ear marmoset): 100398174
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Entry
100398174 CDS
T03264
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc03015
mRNA surveillance pathway
cjc03040
Spliceosome
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100398174 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
100398174 (NCBP1)
03015 mRNA surveillance pathway
100398174 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100398174 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100398174 (NCBP1)
03041 Spliceosome [BR:
cjc03041
]
100398174 (NCBP1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100398174 (NCBP1)
Spliceosome [BR:
cjc03041
]
Common components
Common spliceosomal components
Cap binding complex
100398174 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
100398174
NCBI-ProteinID:
XP_002743159
Ensembl:
ENSCJAG00000010840
UniProt:
A0A2R8MCM2
LinkDB
All DBs
Position
1:142788686..142829005
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLSQDLESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgacggtgggcagcctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggggttttggaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgacaatttatacaacattagttggactactgaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgtcaacttaaagaatcattgaaagcaaacaat
tataatgaagccgtatatttggttcgttttttatctgatcttgtgaattgtcacgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagcgtaactcaggaagaggat
gtgcctcaggtgcggcgagattggtatgtgtatgcatttctgtcatctttgccctgggtt
ggaaaggagttgtacgaaaagaaagatgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccaaaagactcatgtacccatgttacaggtatggactgctgat
aaaccacatccacaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggaacggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcactgcagcataatctgcctccttttacaccacctcctcacactgaagattca
gtgtatccaatgccaagggtcatcttcagaatgtttgattacacagatgatcctgagggt
cctgttatgccagggagtcattcagtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccactggaaggaaaggaagacttgtgctgcacagttagtgagctatcca
gggaagaacaagatccccttgaactaccacatagttgaggtgatatttgcagagctcttt
caacttccagcaccccctcacattgatgtgatgtacacaacacttctcattgaactgtgc
aagcttcagcctggctctctaccccaagttcttgcacaggcaacggaaatgttatacatg
cgtttggacacaatgaataccacctgtgtagacaggtttattaattggttttctcatcat
ctaagtaacttccagttccgttggagctgggaagattggtcagattgtcttagtcaagat
ctcgaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgttcctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttataagtatggagatgaaagcagcaattctcttcctggacattctgtt
gccctctgtttagctgttgcctttaaaagtaaggcaaccaatgatgaaatcttcagcatt
ctgaaagatgtaccaaaccctaaccaggatgatgatgacgatgaaggattcagttttaac
ccattgaaaatagaggtctttgtacagactctgctacacttggcagccaaatcattcagc
cactcctttagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgagagtgat
gaaggaaagttacatgtgctaagagttatgtttgaggtctggaggaaccatccacagatg
attgctgtgctagtggataagatgattcgtacacaaatagttgattgtgctgcagtagca
aattggatcttctcttcagaactatctcgtgactttaccagattatttgtttgggaaatc
ttgcactctacaattcgtaagatgaacaaacatgtcttgaagatccagaaagagctagaa
gaagctaaagagaaacttgcaaggcaacacaaacggcgaagtgatgatgatgacagaagc
agtgataggaaagatggggctcttgaggaacaaatagaaagacttcaggaaaaagtggaa
tctgctcagagtgaacaaaagaatctcttccttgtcatatttcagcggtttatcatgatc
ttgactgagcacttagtacgatgcgaaactgatgggaccagtgtattaacaccatggtat
aagaactgtatagagaggctgcagcagatcttcctacagcatcaccagataatccagcag
tacatggtgaccctggagaaccttctcttcactgctgaattagaccctcatatcttggct
gtgttccagcagttctgtgccctgcaggcctaa
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