Callithrix jacchus (white-tufted-ear marmoset): 100398255
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Entry
100398255 CDS
T03264
Symbol
PKD1L1
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjc03037
]
100398255 (PKD1L1)
04040 Ion channels [BR:
cjc04040
]
100398255 (PKD1L1)
Cilium and associated proteins [BR:
cjc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100398255 (PKD1L1)
Ion channels [BR:
cjc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100398255 (PKD1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
PKD_channel
Glyco_trans_2_3
Motif
Other DBs
NCBI-GeneID:
100398255
NCBI-ProteinID:
XP_035109247
LinkDB
All DBs
Position
8:complement(14521678..14705022)
Genome browser
AA seq
2790 aa
AA seq
DB search
MTKKAAKNTSDAQERYLQAACCLSFCGEMPVSTDKSWGLHLCSCSPPGGGVWVEVCADRA
LLMSDEKCGCPRCALNGKAEDWESQSPSSLASGEKNILKTTSKAVSSVVNEKIQAVNEKT
RVPLDGDNSADSIPHKPFAIIASAGSSSGPWFHHRQLCAAGTTGSTSSGLLQVQGTSSAA
APCSLKMEASCCVLRLLRCAEDVASGLLPGTVTMETPTKAARPIQTSTHSHDLPPGTLHT
PSFTASQPGPESFYPPQHPPVAILAQNPDDSMNPVINCFLEMETWAPPNLGFRVHMASGK
PICLMMDFGDSCGVEMRLQNMSEAMVVTAYHQYSKEGVYMLKAVIYNEFHGTEVELGPYY
VEIGHEAMSVFMNSSSVHEDEVLVFADSQVTQKSTVIIHHFPSIPSYNVSFISPTRVGDS
QAWHSMTIWYKMQSVSVYTNGTVFATDTDITFAAITKETIPLEFEWYFGEDPTVRTTSRS
IKKRLSIPQWYRVMVKASNRIGSVVSEPHMIRVQKKIVANRLMSPSSALVNASVAFECRI
NFGTDVAYLWDFGDGTVSLGSSSSSHAYSREGEFTVEVLAFNNVSASILRKQLFIVCKPC
QPPLVKNMGPGKIQIWRSQPVRLGVTFEAAVFCDISQGLSYTWKLMDSDGLPVSLPAAVD
TRRQTLLLPSHTLEYGNYTALAKVQIEGSVVYSNYCVGLEVQAQAPVSMISEGTHLFFSR
TASSPIVLRGTQSFDPDNPGASLRYHWECTTASSPGHPCFNPSTAHQLDAGAPTVSFEAQ
WLSDSYDQFLVMLRVSSGGRNSSEAQVFLSPHPDSAFRFLHISWVSFKDTFVNWNDELSL
QAVCEDCGEMLNLSYSWDLFLVNATDKNRIEVPFCRVVGLLGSLGLGAVSISSQSNLLST
EPITADPDATTTPFSREPSPMPLGQPAPSAPRGPSTEPMTGVYWIPAVGDSAVLGEAPEE
GSLDPEPGPQSKGSLMTDPSERSQPTHSPDPHLSDFEAYYSDIQEAIPSEGRQPANDTSF
PGSGPSLSAKESPGDGDNLMDPSLSAGRAKPVLMIDWPKALLGRAVFQGYSTSGITEQTV
TIKPYSLSSGETYVLQVSVASKLGLLGKAQLYLTVNPAPQDMACQVQPHHGLEAHTIFSV
FCMSGKPDFQYEFSYQIGNTSKHTLYRGRDAQYYFVLPAGEHLDNYKVMVSTEITDGEGS
KVQPCTVVVTVLPRYHGNDCLGEDLYNSSLKNLSTLQLMGSYTEIRNYITVITRILSRLS
KEDKTASCHQWSQTQDALISSVCKLAFVDQEEMTGSVLMLRDLVSFSSKLSFMSAVLILK
YTRALLAQGQFSGPFMVDKGVRLKLIGLISRVWEVSEQENSKDEGYLREEGITVISHLLL
GCLSLNHVSTGQMEFRTLLHRNLQSSVQSLGSVQVHLPGDLAGHNPTGAETQSPCYISQL
ILFKKSPYPGGQVPGQIGGVVGLNLYNCSSRRPINRQWLRKPVMVEFGEEDEPDNRRNKT
TFVLLRNKVNLHQFTELSENPQESLQIEIEFSKPVTRVFPVMLLVRFSEKPTPSDFLVQQ
IYFWDESTVQIYIPAASQKDASVGYLSLLDADYDRKPPNKYLAKAVNYTVHFQWIRCLFW
DKREWKSERFSPQPGTSPEKVNCSYDRVAAFALLRRKLKASFEVSGISKFQSHPANLLPS
IFIMGSMILYGFLVAKSRQVDHHEKKKSGYIFLQEAPLPGHQLYAVVIDTGFRAPARLTS
KVYIVLCGDNGRSETKELSCPEKPLFERNSRHTFILSAPAQLGLLRKICLWHDSCGPSPS
WFISHVMVKDLHTGQGWFFPAQCWLCAGRHDGRVERELTCLRGGLGFRKLFHCKFTEYLE
DFHVWLSVYSRPSSSRYLHTPRLTVSFSLLCIYACLAALVTAGGQEQPQLDVSPSLESFR
VGLLCTLLASPGAQLLSLLFRLSKEAPGPVRAEPHSPLRGGAQTEAPQGSNSCRSISDAQ
ETCQHPASAILSGSGRAQRKAASDNGTACPAPELEAHGADHSRTALTGKSHCCPPRAQAP
SGGLERPMPQWSRAPLPWWSSAAWAICGTTSLACGLGTGFLGYRFGQEQCVQWLQLLSLS
VVCCVFITQPLMVCLMALGFAWKRRADNHFFTESLFEATRNLDCELAERPWSCLPLSASY
SIPDCAGEAEKVLAARQRARHLRWVCPPSKAQLRITREGMRRGSRTRAALRDISMDILML
LLLLYIIYARFSQDEYSLNQAIRKEFTRNARNSLGGLRNITDWWDWSLTTLLDSLYPGGS
PSTRVPGAQPGALGGKCYLIGSSIIKQLKVFPSHLCKAPRPFSAFIDNYLPTCSPEVGGL
EKPCLIDPENQNMTLNGPGGCGAREDCVLSLGRSRPEAHTALSRLRANTWIDRSTRAVSV
HFTLYNPPTRLFTSVSLSVEILPTGSLVPSSRVESFSIFRSNSALQCHLVLPQLVFLVLS
LIHLYVQLHRMMDKGVLSYWRKPRNWLELSVVGVSLTYYAVSGHLATLAGDVTDQFHRGL
CHAFMDLTLMASWNQRARWLQGILLFLLTLKCIYLPGIQNTMASCSSMMRHSLPSVFVAG
LVGAPMLAAVSHLRRFLLSMWALPPGTFTDAFPRLLFRFPGRSQKDSFLDLSKSEQRAMA
GYFGALLIVSVTLCFGMLRGFLMILPRKRQPFQSKSLVRLKDVTAYMWEKALTFLRLKAP
KLEEAEMVENHNYYLDEFANLLDELLMKINDLSDSLQLPLLEKTSNSTGEARAEESPLVD
ISSYQATEPEDIKDLQEAGTSHRHSGPHFA
NT seq
8373 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaaggcagccaaaaacacttctgatgcccaggaaaggtatctccaggctgcc
tgctgcctttccttttgtggtgaaatgcctgtgagcactgacaagagctggggtcttcat
ctgtgcagctgtagccctcctggaggtggagtgtgggttgaggtctgtgctgatcgtgcg
ctgcttatgagtgatgagaagtgtggctgtccccggtgtgctttgaacggaaaggcagaa
gactgggaatcacagagcccatcctcattggcctccggggagaagaacattttgaaaaca
actagtaaagcagtgtcaagtgttgtaaatgaaaaaatccaggctgttaatgaaaaaaca
cgggtgcctctggatggtgataacagtgctgatagcattccccacaaacctttcgctata
atcgcaagtgccgggagcagcagtggcccctggttccatcacaggcagctgtgtgctgct
gggaccacaggcagcacgtcctctggccttctccaggtccagggcacctcttctgcggca
gctccctgcagcctgaagatggaggcttcctgctgtgtcctgagactgctgcgctgtgca
gaggatgtggcctcagggctccttccggggactgtcacgatggagacgcccaccaaggca
gccagacctattcaaaccagcacccactctcatgaccttccacctggtactcttcacacc
cccagcttcacagcgtcgcagcctggtcctgagagcttctatcctcctcagcatcctcct
gtggccatcctagctcaaaatcctgatgactccatgaaccctgttatcaattgcttccta
gaaatggaaacctgggcgcctccaaatttgggattccgtgtgcacatggcttctggaaag
cctatttgtctaatgatggattttggggacagctgtggggttgaaatgaggctacagaac
atgtctgaggcaatggtggtgactgcctaccaccagtactcaaaagaaggagtctatatg
ctcaaggctgttatttataatgagtttcatggaaccgaagtggagcttgggccttattat
gtggagattggccatgaggccatgtctgtgttcatgaactccagcagtgtccatgaggat
gaagtgcttgtctttgctgactctcaagtgactcagaaaagcactgtcattatacatcat
tttccatctattccttcatataacgtgtcctttatttctccaactcgagtgggtgacagc
caggcttggcacagcatgactatctggtataagatgcaatctgtctctgtctacacaaat
ggaactgtgtttgccacagacacagacatcacatttgcagctattaccaaggaaacaata
cccctggagtttgagtggtattttggagaggatccaacagtgaggacaacttcaagaagc
attaaaaaaagactcagcatcccccaatggtatcgtgtgatggttaaggcttccaacagg
atcggcagtgtggtctctgagccccacatgatcagggtacagaagaaaattgtggccaat
cggctcatgtccccctcatcagctctggtaaatgccagtgtggcctttgagtgcaggatc
aacttcggcacagatgttgcctacctgtgggactttggggatggcaccgtcagcctgggg
agcagctccagcagccatgcctacagtagggaaggagaatttacagtggaggtccttgcc
ttcaataacgtcagtgcctccatcctaagaaagcaacttttcatcgtgtgcaagccctgc
cagccacccctggtgaagaacatggggcctgggaaaatccagatatggaggtctcagcct
gtgaggctgggagtgacatttgaagctgcagtcttctgtgacatttcccaaggtctttct
tacacctggaagttgatggactctgatgggctccctgtctccctccctgctgctgtggac
actcgcagacagaccctcctcctcccgagccacaccctggagtacgggaactacaccgcc
cttgccaaggttcagattgaaggcagtgtggtgtatagcaactactgtgtgggcctggag
gtgcaggcccaggcccctgtcagtatgatctccgagggcacacaccttttcttctccagg
accgcttcatcccccattgtcctcagagggacccagtccttcgaccctgacaaccctggg
gccagtctcaggtatcactgggaatgcaccaccgccagctctccaggacatccctgcttc
aacccctccactgcacaccaactagacgccggggctcccactgtttcctttgaggcacag
tggctcagtgacagctatgatcagttccttgtgatgctgagggtctccagtggtggccgg
aactcttctgaggcccaggtgttcctgtccccccatcctgactcagccttcagattcctc
cacatctcctgggtcagctttaaagacacctttgtcaactggaatgacgaactctctctt
caagctgtatgtgaggactgtggtgaaatgctgaatctgtcttattcctgggatctcttt
ttagtcaatgcaacagataagaataggatagaagttcccttctgcagagtagtgggtctg
ctgggctcactgggactcggtgccgtttcaatatcatcacagtcaaacctgctgtccact
gagcccatcacagcagatcctgatgccacgaccacaccattctcacgggaaccttcaccc
atgccccttggccagcctgccccttcagccccaaggggaccttccacagagcccatgact
ggagtttactggattcctgctgtgggggactctgcagtcctgggggaggctccagaggaa
ggttcactagacccagagccggggccacagagcaagggatccctgatgactgacccctcg
gagagaagtcagcccacccacagccctgatcctcacctctctgattttgaagcctattac
agcgatattcaagaagcaataccatcagaaggaagacagccagcaaatgacaccagcttt
ccaggatcaggacctagcctgagtgccaaggagagccctggagatggggataacctgatg
gacccctccctgtctgcgggcagagccaagcccgtcctcatgattgactggcccaaggcc
ctgctgggaagagcagttttccaaggctattcaacctcaggtattacagaacagacggtg
acaatcaagccatactctctgagcagtggagagacatacgtcctgcaagtgtctgtggct
tcaaagcttggcttactgggtaaagctcagctgtacttgacagtcaacccggctccacag
gacatggcctgccaggtgcagccccaccatggtctggaggcacacaccatcttcagtgtt
ttctgcatgtcaggaaaaccggacttccagtacgaatttagttaccagataggaaacacc
tccaaacacacattgtaccgtgggagagacgcccagtattattttgtgttgccagctggt
gagcacttggacaattacaaagtcatggtttccactgaaatcacagatggcgaaggctcc
aaggtccagccgtgcactgtggtggtgactgtgctgccccgctaccatggaaatgactgt
ctgggcgaggacctgtataattccagcctgaaaaacctgtctaccctccagctgatgggg
agttacacagaaatcaggaactacatcactgtgatcaccagaatcctgagtcgtttgtct
aaggaggacaaaactgcctcctgccaccaatggtcacaaacacaggatgcattaatttct
tcagtatgcaaattagcttttgtagatcaggaagaaatgactggttctgttcttatgttg
agggaccttgtgagcttctctagtaagctaagctttatgagtgcagttctcatcctcaag
tacacccgggcgctccttgctcaaggccagttctccgggccgttcatggttgacaaagga
gtgaggctcaagctcatcggtctcatatccagagtctgggaagtctctgagcaagaaaac
tcaaaggatgaaggctatctacgtgaggaaggaattacggtcatctcacatttattgttg
ggttgtctctctttgaatcacgttagcactgggcagatggagttccggacccttcttcat
cgcaaccttcagagctctgtccagagcctgggatctgtccaagtgcatttacctggtgac
cttgctgggcacaatcctaccggtgcggagacacagagcccatgctacattagccagctt
atactcttcaagaagagcccatatccagggggccaagttcctgggcagattggaggagtt
gtgggcctcaatctctacaactgctccagcagaagacccatcaaccggcagtggctgagg
aaacccgtgatggtcgagtttggggaggaagatgagccggataataggagaaataaaaca
acatttgtattacttcggaataaagtgaatctccatcagttcactgaactttctgaaaac
ccccaggaatctctacagatagaaattgagttttccaaacctgttacaagagtgtttccc
gtcatgttgctagtaagattctctgagaaacctactccctctgattttcttgtacagcag
atctacttctgggatgagtcaactgtgcagatttatatacctgctgcttctcagaaagat
gccagtgtcggctatttgtccttactggatgctgactatgacagaaaacctccaaacaaa
tatttagctaaggcagtgaactatacagtacatttccagtggatccgatgcctgttttgg
gacaagagagagtggaaatctgaacgtttctctccacaaccaggaacttctcctgaaaaa
gtgaactgcagctacgatcgtgtcgcagcattcgctctcctaaggagaaagctgaaggcc
agttttgaagtgagtggcatttccaagttccagagccacccagcaaacttgcttcccagt
atttttattatgggttctatgattctttatggatttttggtcgctaaaagcagacaagta
gatcatcatgaaaaaaagaaatctggttacatatttctgcaagaagctcccctgccgggc
caccagctgtatgcagtcgtcattgacaccggcttccgggctccggccaggttgacctca
aaggtgtacatcgttttatgtggtgacaatggacggtcagaaaccaaggagctctcctgt
ccagagaagcccctgttcgaaaggaattccagacacacctttatcctgagtgctcctgcc
cagctgggcctgctgaggaagatctgcctctggcacgacagctgtgggccctccccgagc
tggttcatcagccacgtgatggtgaaggatctgcacacaggacagggctggttcttcccc
gcccagtgctggctgtgtgccggccggcatgacggccgtgtggagcgggagctcacctgt
ctgcgagggggactcggcttccggaagcttttccattgcaagttcacagagtacctggag
gatttccacgtctggctgtcggtgtacagcaggccctcctccagccgctacctgcacacg
ccgcgcctcaccgtgtccttctccctcctgtgcatctatgcctgtcttgctgccctggtc
actgctggagggcaagagcagccccagctggatgtcagcccctcccttgaatccttcagg
gtgggtctcctgtgtaccctcctggcttctccaggggcccagctcctgtctctgctcttc
aggctcagcaaggaagccccggggcctgtccgagcagagccacacagcccccttagagga
ggagcacagaccgaggcaccccagggttctaattcctgcagaagcatttcagacgcacag
gaaacctgccagcatcctgcatcagccattctctctgggagtggcagggcccaaaggaag
gcggcaagtgacaatggcacagcctgtccagcccctgagctggaggcccatggggctgac
cacagcaggactgctctgacagggaagagccactgctgccctccccgtgctcaagcaccc
agtggtggtttggagagaccaatgccccagtggtcaagagcccctctgccttggtggagc
tctgcagcatgggccatctgtgggaccacgtctctggcctgtggtttggggacaggattt
ctaggctacaggtttggccaggagcagtgtgtgcagtggctgcagctgctgtccctctcc
gtggtctgctgtgttttcatcacccagccacttatggtgtgcctcatggccttgggtttt
gcttggaaaagaagagctgacaaccatttttttactgagtctttatttgaggcaaccagg
aacctggactgtgaactggcagaacgtccctggagttgccttcccctctccgcaagctac
agcattcctgactgtgcaggggaggctgaaaaagtcttagctgcccgacaacgagctcgc
cacctgcgctgggtgtgtccaccttccaaggcccagctgaggatcaccagagagggaatg
aggagagggagtcgcacacgggcagccctgagagacatttcaatggacatcctcatgctg
cttctgcttttgtatataatatatgccagattttcccaagatgaatactccctcaatcaa
gctatccggaaagaatttacaagaaatgccagaaactccttgggtggcctgagaaacatc
actgactggtgggactggagtctgaccacactgctggacagcctgtacccgggaggctcc
ccgtcaacccgtgtgccaggggctcagcctggagctcttggaggaaaatgctacctaata
ggtagttccataattaagcagctaaaagtttttcctagccatttatgcaaggctcccagg
ccattttcagcattcatcgacaactatcttcccacatgtagccccgaagttggaggcctt
gagaagccctgcctgatagacccagagaaccaaaacatgaccctgaatggtcctgggggc
tgtggggcaagggaggactgtgtgcttagcctgggcagatcaaggcctgaagcccacaca
gccctgtcccgactcagggccaacacgtggattgaccgcagcaccagggctgtgtctgtg
cacttcaccctctataaccctccaacccgactcttcaccagcgtgtccctgagcgtggag
attctccccacggggagtcttgtcccctcatcccgggtggagtcattcagcatcttccga
agcaactcagccctgcaatgccaccttgtgctgcctcagctggtcttcctggtgctcagc
ctgatccacctctacgttcaactccaccgtatgatggacaagggtgtcctcagctactgg
cgaaagccaaggaactggctggagctctctgtggtcggagtgagcctcacctactatgca
gtttctggccaccttgctactcttgctggagatgtcactgaccagtttcacagaggactt
tgccacgcatttatggacctcacccttatggcatcatggaatcagagggcgcgatggctc
cagggaatcctcttattcctcttgacattaaaatgcatctatcttcctggcattcaaaac
acaatggcgtcctgctcctccatgatgcgccactcactccccagcgtctttgtagcaggg
ctggtgggggcccctatgctggctgccgtctcccacttgcgccgattcctgctttctatg
tgggctctaccacctggcaccttcacagacgccttccccaggctgctgtttcgttttcct
ggaagaagccaaaaagactccttccttgacctttccaagtctgagcagcgggccatggct
ggttactttggggcccttttaatagtctctgtcacattgtgttttggaatgctgagaggt
tttctaatgattttaccccgaaaaagacaaccttttcaaagtaaatctcttgtgagactt
aaagacgtcactgcttatatgtgggaaaaggccctcacctttctgagactgaaagcacca
aagttagaagaggctgagatggttgagaatcacaattactacttggatgaatttgcaaat
ctgttagatgaacttctgatgaagattaatgatttgtctgacagcctacaactccctctt
ctggaaaaaacatccaacagcacaggggaggcaagagcagaagagagtcccttggtggac
atttccagttaccaagctactgagccagaagacatcaaggacttacaggaggctggcacc
tcgcataggcactctggaccccattttgcttaa
DBGET
integrated database retrieval system
