Callithrix jacchus (white-tufted-ear marmoset): 100398275
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Entry
100398275 CDS
T03264
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100398275
Ion channels [BR:
cjc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100398275
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
100398275
NCBI-ProteinID:
XP_035120273
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Position
11:65771761..65789627
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AA seq
900 aa
AA seq
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MVMLLTPGSQHLHSFICQQPNWTEIVNRKLRFPPLLLGAIQEGRLGLVQQLLESGVEATR
SGPGGPLWNVEEAEDRSWREALNLAIRLRHEAITDMLLASVKFDFRQIHEALLVAVDTNQ
LEVVRHLLARLEREKGRKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLL
MDQGHTIAWPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASKAHLSLASEDAMLAAF
QLSHELRRLAHKEPEFKPEYIALESLSQDYGFELLGMCRNQIEVTAVLNDLGEDSKTEPE
TEGPSLAFEEGIPNLARLRLAINYNQKQFVAHPICQQVLSSIWCGNLAGWRESTTIWKLF
IAFLIFLTMPFLCLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLVMETQL
STFRGRSQSVWETSLHMIWVTGFLWFECKEVWIEGLRSYLLDWWNLLDMVILSLYLAAFA
LRLLLAGLAHMHCQEDSQGAACHYFTMAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAYI
LPAHESLGTLQISIGKMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGKFNETFQ
FLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDD
ADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAVFYLLRRTCQFICCCCSCCNTKKPE
NPPVPTFANPGAGAMPGEGERGSYHLRVIKALVQRYIETARREFEETRRKDLGNRLTELT
KTVSRLQSEVAGVRRTLAEGGTPRPPDGASVLSRCITQMRNSFQNLGPPIPETPELTGPR
IVGTQESSGTRRQDTGEVRTLASGESGPRSPAHVLVHRQQETEGAEDLPHREDSGTEERI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgctgttgacaccagggtcccagcatctccactccttcatctgccaacagcct
aactggactgagatcgtgaacaggaagctcaggttcccacctctactcctgggtgccatc
caggagggccgactgggccttgtgcagcagcttctggagtcaggggttgaggccacacgc
agtgggccaggcgggcccctgtggaatgtggaagaggccgaggaccgctcctggagggaa
gcactcaacctggccatccgcctgcgccacgaggccatcactgatatgctgttggccagt
gtcaagtttgacttccgccagatccatgaggccctgctagtggcagtggacacaaaccag
ctggaagtggtgcgtcacctgctggcccggctggaacgggagaagggtcgtaaagtagac
accagatctttctcactggctttctttgactcatcaatcgatggctcccgctttgcacct
ggtgtcactcccctcaccctggcctgccagaaggacttgtatgagatagcgcagctgctc
atggaccagggtcacaccattgcctggccccacccagtctcctgtgcctgcctcgagtgc
agcaacgcccgccgctacgacctgctaaagttctcgctgtcccgcatcaacacctaccgt
ggcatcgccagcaaagcccacctctcactggccagtgaggacgccatgctggctgccttc
cagctgagccacgagctcaggcgccttgcacacaaggagcctgaatttaagcctgagtac
attgccctggagtcactgagccaggactatggctttgagctgctgggcatgtgccggaac
cagatcgaggtcactgcagtgctcaatgacctgggtgaggacagcaagactgagcctgag
actgagggcccaagcctggcctttgaggaaggcatccccaacctggcaaggctgcgactg
gccatcaactacaaccagaagcagtttgtagcacaccccatctgccaacaagtcctgtcc
tccatctggtgtgggaacctggctggctggcgtgaaagtaccaccatctggaagctcttc
attgccttcctcatcttcctcaccatgccctttctctgccttggctactggctggcacca
aagtcccggctgggccgccttctaaagatcccagtactgaagttccttctgcactccgcc
tcctatctgtggttcctcatcttcctgctgggagagtccctggtcatggagacacagctg
agcaccttccgtggccgcagccagagtgtctgggaaacctcactacacatgatttgggtc
acaggcttcctgtggtttgagtgtaaggaagtatggattgagggcctgcgcagttacctc
ctggactggtggaacttactggatatggtcatcctgtccctgtacctggcagccttcgca
ctgcgcctcctcctggctggacttgcccacatgcactgccaggaggactcccagggggct
gcctgccactatttcaccatggctgaacgcagcgagtggcgcaccgaggatccccagttc
ttggctgaggtgctgttcgctgttaccagcatgctcagcttcacccgcctggcctacatt
ctgccagcacacgagtcactgggcactctgcagatttccattggcaagatgatcgatgac
atgatccggtttatgttcattctcatgatcatcctgactgccttcctctgtggcctcaac
aatatctatgtgccctaccaggagacagagcggctgggcaaattcaatgagacgttccag
tttctgttctggaccatgtttggcatggaggagcacagtgtggtggacatgcctcagttt
ctggtgcccgaatttgtgggacgggccctatatggcatcttcaccattgtcatggtcatt
gtgctgctcaacatgctcattgctatgatcaccaactccttccagaagatcgaggatgat
gccgacgtggagtggaagttcgcacgctccaagctctatctgtcctacttccgggagggc
ctgacgctgcctgtgcctttcaacatcctgccctccccgaaggctgtcttttaccttctc
aggagaacttgccagttcatctgctgttgctgttcctgctgcaacaccaagaagccagaa
aatccccccgtccctacctttgccaatcccggggcaggggccatgcctggggagggagag
cgtggatcctaccaccttcgcgtcatcaaggccctggtacaacgctacatagagactgcc
cggcgtgagtttgaggagacccggcggaaagacctgggcaacagactcacagagctgacg
aagaccgtatctcgactacaaagcgaggtagccggcgtgcggcggactctggcagaggga
ggaacaccccggcctcccgatggtgccagtgtcctcagtcgctgtatcacccaaatgcgc
aacagtttccaaaacctggggccccccattcctgagaccccagagctgacaggacccagg
attgtggggacccaggaatcatcaggaaccaggcgtcaggacactggagaggtgaggact
ctggcttctggagagtctggccccagatccccagctcatgtgctagtgcacaggcagcag
gaaacagagggggctgaggacctgccccacagggaggattcagggacggaggagaggatc
tga
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