Callithrix jacchus (white-tufted-ear marmoset): 100398479
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Entry
100398479 CDS
T03264
Symbol
ARHGEF16
Name
(RefSeq) rho guanine nucleotide exchange factor 16 isoform X1
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100398479 (ARHGEF16)
Membrane trafficking [BR:
cjc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100398479 (ARHGEF16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SH3_1
SH3_9
SOS1_NGEF_PH
SH3_2
RHG20_PH
IQ_SEC7_PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
100398479
NCBI-ProteinID:
XP_035163364
Ensembl:
ENSCJAG00000002662
UniProt:
F6Y083
LinkDB
All DBs
Position
7:38427262..38453009
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AA seq
709 aa
AA seq
DB search
MSQRHSDSSLEEKLLEYRFHSELRLDASGNPASGLPMVRGSLRVRDNAAFQPEAPAPPEP
RPPGHEEPRPIILSTESPAALKLGTQQMIPKGLAVASKSKTPARHQSFGAAVLSREAARR
NPQLLPAASFSLDDMDMDTDPRGMLRRNLRNQSYRAAMKGLGKPGGQGDTIQLSPKLQAL
AEEPTQPAIRSPARHKKTLGRKRGHKGSFKDDPQFYQEIQERGLNTSQESDDDILDEPSS
PEGGRKADATIVVKSYRPAQVTWSQLPEVMESGILEQLSTEERKRQEAMFEILTSEFSYQ
HSLSILVTEFLQSQELRATMTQMEHHHLFSNILDVLSASQRFFEDLEQRHKAQVLVEDIS
DILEEHAERHFYPYIAYCSNEVYQQRTLQKLTSSNATFREVLREIERRPACGGLPMLSFL
ILPMQRVTRLPLLTDTLCLKTQGHSERYKAASRALKAISKLVRQCNEGAHRMERMEQMYT
LHTQLDFSKVKSLPLISASRWLLKRGELSLMEETGLFRKLASRPTCYLFLFNDVLVVTKK
KSEESYVVQDYAQIDHVQVEKMEPSELPLPGGGNRSSSVPHPFQVTLLRNSEGRQEQLLL
SSDSASDRARWIVALTHSERRWQGPAKKGDLPQVEITKAFFAKQADEVTLQQADVVLVLQ
EEDGWFYGERLRDGETGWFPQDFARCITSRVAVEGNVRRMERLRVETDV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcggcactcagacagctccttggaggagaagctcctggaataccgcttccac
tcggagctccggctcgatgccagtgggaacccagcctctgggctcccgatggtccgtggc
tcccttcgcgtcagggacaatgccgccttccagcccgaggccccggcacccccagagcct
cggcccccagggcatgaggagccacggcccatcatactgagcacagagagcccagcggcc
ctgaagctgggcacccagcagatgatccccaagggcctggccgtggccagcaagtcgaag
accccagcccgccaccagagctttggggcagctgtgctcagcagggaggctgcccggcgg
aacccccagctcctcccagccgccagcttctccctggacgacatggacatggacacggac
cccaggggcatgctgaggcggaacctacggaaccaatcctaccgggcagccatgaagggc
ctggggaagccaggtggccagggggacaccatccagctaagcccaaagctgcaggctctg
gccgaggagcccacccagcctgccattaggagcccagccagacacaagaagacgctgggg
cggaaacgtggacacaagggctccttcaaggacgacccccagttctaccaggagatccag
gagcggggcctgaacaccagccaggagtctgatgatgacatccttgacgagccctccagt
cccgagggaggccggaaggcggatgccaccattgtggtcaagagctaccggcccgcccag
gtcacctggagccagctcccggaggtgatggagtcaggcatcctggagcagctctccacc
gaggagcgcaagaggcaggaggccatgtttgagatcctcacgtccgagttctcctaccag
cacagcctgagtatcctggtgacagagttcctgcaatcccaggagctgcgggcgaccatg
acccagatggagcatcaccatctcttctccaacatcctggacgtgttgagtgccagccag
aggttcttcgaggacctggagcagcggcataaggcccaggtgctggtggaggacatcagc
gacatcctggaggagcacgccgagaggcacttctacccctacattgcctactgctctaac
gaagtctaccagcagcgcacgctgcagaagctgacaagcagcaatgccaccttccgagag
gtcctgagagagattgagaggcggccagcgtgcgggggcctgcccatgctctccttcctg
atcctgcccatgcagcgggtaacccggctgcccctcctgacagatacactctgcctcaag
acccagggccactctgagaggtacaaggctgccagccgtgcactgaaggccatcagcaag
ctggtgaggcagtgcaatgagggggcccacaggatggagcgcatggagcagatgtacacg
ctgcacacacagctggacttcagcaaggtcaagtccctccccctgatctccgcctcccgg
tggctgctgaagcgaggggagctgtccttgatggaagaaaccggacttttccgaaaactc
gccagccggcccacatgctacctattcctgttcaacgatgtcctggttgtgaccaagaag
aagagcgaagagagctacgtggtccaggactatgcccagatagaccatgtccaggtggag
aagatggagccatcagagcttcccctgcccgggggcggcaaccgaagctcctccgtgccc
caccccttccaggtgacgctgcttcgcaacagcgagggccgccaggagcagctcctgctc
tcctctgactccgcgagtgaccgggcgcggtggattgtggcactcacgcacagtgagaga
cggtggcaaggccctgccaagaagggagacctaccccaggtggagatcaccaaggccttc
ttcgcaaagcaggcggatgaggtcacgttgcagcaggcagacgtggtcctggtcctgcag
gaggaagacgggtggttctatggtgagaggctccgggacggagagacaggctggttcccc
caggactttgcccgctgcatcaccagccgtgtggcagtggagggcaacgtccgcaggatg
gagcgtctgcgggtggagacggacgtgtag
DBGET
integrated database retrieval system
